RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 CTXN3Q4LDR2 81 aa19.66■□□□□ 0.74
COL1A1-207ENST00000486572 SLC8B1Q6J4K2 584 aa19.66■□□□□ 0.74
COL1A1-207ENST00000486572 RSPO2Q6UXX9 243 aaPredicted RBP19.66■□□□□ 0.74
COL1A1-207ENST00000486572 TMC5Q6UXY8 1006 aa19.66■□□□□ 0.74
COL1A1-207ENST00000486572 WDR49Q8IV35 697 aa19.66■□□□□ 0.74
COL1A1-207ENST00000486572 SLC9A9Q8IVB4 645 aa19.66■□□□□ 0.74
COL1A1-207ENST00000486572 ELOA2Q8IYF1 753 aaPredicted RBP19.66■□□□□ 0.74
COL1A1-207ENST00000486572 C1orf127Q8N9H9 656 aa19.66■□□□□ 0.74
COL1A1-207ENST00000486572 KREMEN2Q8NCW0 462 aa19.66■□□□□ 0.74
COL1A1-207ENST00000486572 CMASQ8NFW8 434 aaPredicted RBP19.66■□□□□ 0.74
COL1A1-207ENST00000486572 TMEM174Q8WUU8 243 aa19.66■□□□□ 0.74
COL1A1-207ENST00000486572 SMARCE1Q969G3 411 aa19.66■□□□□ 0.74
COL1A1-207ENST00000486572 ANKRD36BP1Q96IX9 119 aa19.66■□□□□ 0.74
COL1A1-207ENST00000486572 RIPOR3Q96MK2 946 aa19.66■□□□□ 0.74
COL1A1-207ENST00000486572 ZNF560Q96MR9 790 aa19.66■□□□□ 0.74
COL1A1-207ENST00000486572 NECTIN4Q96NY8 510 aa19.66■□□□□ 0.74
COL1A1-207ENST00000486572 INTS13Q9NVM9 706 aa19.66■□□□□ 0.74
COL1A1-207ENST00000486572 CDH22Q9UJ99 828 aa19.66■□□□□ 0.74
COL1A1-207ENST00000486572 FBXW11Q9UKB1 542 aa19.66■□□□□ 0.74
COL1A1-207ENST00000486572 ITGA11Q9UKX5 1188 aa19.66■□□□□ 0.74
COL1A1-207ENST00000486572 MAPK8IP1Q9UQF2 711 aa19.66■□□□□ 0.74
COL1A1-207ENST00000486572 PTPRJQ12913 1337 aa19.66■□□□□ 0.74
COL1A1-207ENST00000486572 ARHGEF37A1IGU5 675 aa19.65■□□□□ 0.74
COL1A1-207ENST00000486572 CALUO43852 315 aaPredicted RBP19.65■□□□□ 0.74
COL1A1-207ENST00000486572 TBC1D4O60343 1298 aa19.65■□□□□ 0.74
COL1A1-207ENST00000486572 NR3C1P04150 777 aa19.65■□□□□ 0.74
COL1A1-207ENST00000486572 TYMPP19971 482 aa19.65■□□□□ 0.74
COL1A1-207ENST00000486572 POLR2BP30876 1174 aaKnown RBP19.65■□□□□ 0.74
COL1A1-207ENST00000486572 PNPLA4P41247 253 aa19.65■□□□□ 0.74
COL1A1-207ENST00000486572 MTHFRP42898 656 aa19.65■□□□□ 0.74
COL1A1-207ENST00000486572 PSMD6Q15008 389 aa19.65■□□□□ 0.74
COL1A1-207ENST00000486572 SV2CQ496J9 727 aa19.65■□□□□ 0.74
COL1A1-207ENST00000486572 LIN9Q5TKA1 542 aa19.65■□□□□ 0.74
COL1A1-207ENST00000486572 LMBRD2Q68DH5 695 aaPredicted RBP19.65■□□□□ 0.74
COL1A1-207ENST00000486572 C15orf39Q6ZRI6 1047 aa19.65■□□□□ 0.74
COL1A1-207ENST00000486572 USP37Q86T82 979 aa19.65■□□□□ 0.74
COL1A1-207ENST00000486572 SPATA20Q8TB22 786 aa19.65■□□□□ 0.74
COL1A1-207ENST00000486572 ERCC4Q92889 916 aaPredicted RBP19.65■□□□□ 0.74
COL1A1-207ENST00000486572 FAM84AQ96KN4 292 aa19.65■□□□□ 0.74
COL1A1-207ENST00000486572 SENP8Q96LD8 212 aa19.65■□□□□ 0.74
COL1A1-207ENST00000486572 FNBP1Q96RU3 617 aa19.65■□□□□ 0.74
COL1A1-207ENST00000486572 PHF7Q9BWX1 381 aaPredicted RBP19.65■□□□□ 0.74
COL1A1-207ENST00000486572 DMAC2Q9NW81 257 aa19.65■□□□□ 0.74
COL1A1-207ENST00000486572 ZDHHC7Q9NXF8 308 aa19.65■□□□□ 0.74
COL1A1-207ENST00000486572 FBXL5Q9UKA1 691 aa19.65■□□□□ 0.74
COL1A1-207ENST00000486572 TRAF3IP3Q9Y228 551 aa19.65■□□□□ 0.74
COL1A1-207ENST00000486572 PCDHA5Q9Y5H7 936 aa19.65■□□□□ 0.74
COL1A1-207ENST00000486572 TIMM13Q9Y5L4 95 aaPredicted RBP19.65■□□□□ 0.74
COL1A1-207ENST00000486572 TNFRSF10AO00220 468 aa19.64■□□□□ 0.73
COL1A1-207ENST00000486572 PRPF40AO75400 957 aaKnown RBP19.64■□□□□ 0.73
COL1A1-207ENST00000486572 RFPL2O75678 378 aa19.64■□□□□ 0.73
COL1A1-207ENST00000486572 OAZ2O95190 189 aa19.64■□□□□ 0.73
COL1A1-207ENST00000486572 TNNC2P02585 160 aa19.64■□□□□ 0.73
COL1A1-207ENST00000486572 WEE2P0C1S8 567 aa19.64■□□□□ 0.73
COL1A1-207ENST00000486572 DLATP10515 647 aaKnown RBP19.64■□□□□ 0.73
COL1A1-207ENST00000486572 SSTR3P32745 418 aaPredicted RBP19.64■□□□□ 0.73
COL1A1-207ENST00000486572 ROR1Q01973 937 aa19.64■□□□□ 0.73
COL1A1-207ENST00000486572 MYBPC2Q14324 1141 aa19.64■□□□□ 0.73
COL1A1-207ENST00000486572 DUOXA2Q1HG44 320 aa19.64■□□□□ 0.73
COL1A1-207ENST00000486572 ATAT1Q5SQI0 421 aa19.64■□□□□ 0.73
COL1A1-207ENST00000486572 GPR149Q86SP6 731 aa19.64■□□□□ 0.73
COL1A1-207ENST00000486572 SMYD4Q8IYR2 804 aaPredicted RBP19.64■□□□□ 0.73
COL1A1-207ENST00000486572 CSGALNACT2Q8N6G5 542 aa19.64■□□□□ 0.73
COL1A1-207ENST00000486572 LRRC52Q8N7C0 313 aa19.64■□□□□ 0.73
COL1A1-207ENST00000486572 OR5B17Q8NGF7 314 aa19.64■□□□□ 0.73
COL1A1-207ENST00000486572 CXorf38Q8TB03 319 aa19.64■□□□□ 0.73
COL1A1-207ENST00000486572 CCDC127Q96BQ5 260 aa19.64■□□□□ 0.73
COL1A1-207ENST00000486572 IPO9Q96P70 1041 aaKnown RBP19.64■□□□□ 0.73
COL1A1-207ENST00000486572 CGRRF1Q99675 332 aa19.64■□□□□ 0.73
COL1A1-207ENST00000486572 OXCT2Q9BYC2 517 aaPredicted RBP19.64■□□□□ 0.73
COL1A1-207ENST00000486572 AGAP1Q9UPQ3 857 aa19.64■□□□□ 0.73
COL1A1-207ENST00000486572 TSC2P49815 1807 aa19.64■□□□□ 0.73
COL1A1-207ENST00000486572 BDP1A6H8Y1 2624 aa19.63■□□□□ 0.73
COL1A1-207ENST00000486572 CCDC195A0A1B0GUA6 201 aa19.63■□□□□ 0.73
COL1A1-207ENST00000486572 C19orf67A6NJJ6 358 aa19.63■□□□□ 0.73
COL1A1-207ENST00000486572 KPNA7A9QM74 516 aa19.63■□□□□ 0.73
COL1A1-207ENST00000486572 ZMYND10O75800 440 aa19.63■□□□□ 0.73
COL1A1-207ENST00000486572 KRT19P08727 400 aa19.63■□□□□ 0.73
COL1A1-207ENST00000486572 TNNI1P19237 187 aa19.63■□□□□ 0.73
COL1A1-207ENST00000486572 ZNF658Q5TYW1 1059 aaPredicted RBP19.63■□□□□ 0.73
COL1A1-207ENST00000486572 OVOS1Q6IE37 1185 aa19.63■□□□□ 0.73
COL1A1-207ENST00000486572 CYP26C1Q6V0L0 522 aa19.63■□□□□ 0.73
COL1A1-207ENST00000486572 GJD3Q8N144 294 aa19.63■□□□□ 0.73
COL1A1-207ENST00000486572 MFSD14AQ96MC6 490 aa19.63■□□□□ 0.73
COL1A1-207ENST00000486572 RHOBTB2Q9BYZ6 727 aa19.63■□□□□ 0.73
COL1A1-207ENST00000486572 GTPBP4Q9BZE4 634 aaKnown RBP19.63■□□□□ 0.73
COL1A1-207ENST00000486572 POMKQ9H5K3 350 aa19.63■□□□□ 0.73
COL1A1-207ENST00000486572 SIX4Q9UIU6 781 aa19.63■□□□□ 0.73
COL1A1-207ENST00000486572 DSEQ9UL01 958 aa19.63■□□□□ 0.73
COL1A1-207ENST00000486572 SCN1AP35498 2009 aa19.63■□□□□ 0.73
COL1A1-207ENST00000486572 NCOR1O75376 2440 aa19.62■□□□□ 0.73
COL1A1-207ENST00000486572 WDR27A2RRH5 827 aa19.62■□□□□ 0.73
COL1A1-207ENST00000486572 CYB561D2O14569 222 aa19.62■□□□□ 0.73
COL1A1-207ENST00000486572 PAPLNO95428 1278 aa19.62■□□□□ 0.73
COL1A1-207ENST00000486572 CYP11A1P05108 521 aa19.62■□□□□ 0.73
COL1A1-207ENST00000486572 C8AP07357 584 aa19.62■□□□□ 0.73
COL1A1-207ENST00000486572 ARPP19P56211 112 aa19.62■□□□□ 0.73
COL1A1-207ENST00000486572 RBP5P82980 135 aa19.62■□□□□ 0.73
COL1A1-207ENST00000486572 NFIL3Q16649 462 aa19.62■□□□□ 0.73
COL1A1-207ENST00000486572 CLEC17AQ6ZS10 378 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms