RNA–Protein interactions for RNA: ENST00000486556.1

TRADD-202, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2 BASIC

Gene TRADD, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-202ENST00000486556 SAGE1Q9NXZ1 904 aa23.12■■□□□ 1.29
TRADD-202ENST00000486556 CNTN3Q9P232 1028 aa23.12■■□□□ 1.29
TRADD-202ENST00000486556 NXF1Q9UBU9 619 aaKnown RBP23.12■■□□□ 1.29
TRADD-202ENST00000486556 AGAP1Q9UPQ3 857 aa23.12■■□□□ 1.29
TRADD-202ENST00000486556 CYP1A2P05177 515 aa23.12■■□□□ 1.29
TRADD-202ENST00000486556 WEE2P0C1S8 567 aa23.12■■□□□ 1.29
TRADD-202ENST00000486556 ELF2Q15723 593 aa23.12■■□□□ 1.29
TRADD-202ENST00000486556 UBXN11Q5T124 520 aa23.12■■□□□ 1.29
TRADD-202ENST00000486556 TTC39CQ8N584 583 aa23.12■■□□□ 1.29
TRADD-202ENST00000486556 GPR161Q8N6U8 529 aaKnown RBP23.12■■□□□ 1.29
TRADD-202ENST00000486556 SLAIN1Q8ND83 568 aa23.12■■□□□ 1.29
TRADD-202ENST00000486556 HPDLQ96IR7 371 aa23.12■■□□□ 1.29
TRADD-202ENST00000486556 ABCB6Q9NP58 842 aa23.12■■□□□ 1.29
TRADD-202ENST00000486556 CTTNBP2NLQ9P2B4 639 aa23.12■■□□□ 1.29
TRADD-202ENST00000486556 UVRAGQ9P2Y5 699 aa23.12■■□□□ 1.29
TRADD-202ENST00000486556 NCK2O43639 380 aa23.11■■□□□ 1.29
TRADD-202ENST00000486556 MYBL1P10243 752 aa23.11■■□□□ 1.29
TRADD-202ENST00000486556 CD58P19256 250 aa23.11■■□□□ 1.29
TRADD-202ENST00000486556 POLR2BP30876 1174 aaKnown RBP23.11■■□□□ 1.29
TRADD-202ENST00000486556 CENPCQ03188 943 aa23.11■■□□□ 1.29
TRADD-202ENST00000486556 PEX26Q7Z412 305 aa23.11■■□□□ 1.29
TRADD-202ENST00000486556 FAM228AQ86W67 206 aa23.11■■□□□ 1.29
TRADD-202ENST00000486556 VCPIP1Q96JH7 1222 aa23.11■■□□□ 1.29
TRADD-202ENST00000486556 CHST12Q9NRB3 414 aa23.11■■□□□ 1.29
TRADD-202ENST00000486556 AMFRQ9UKV5 643 aa23.11■■□□□ 1.29
TRADD-202ENST00000486556 NOC2LQ9Y3T9 749 aaKnown RBP23.11■■□□□ 1.29
TRADD-202ENST00000486556 CITO14578 2027 aa23.11■■□□□ 1.29
TRADD-202ENST00000486556 GRIN2DO15399 1336 aa23.11■■□□□ 1.29
TRADD-202ENST00000486556 ZNF185O15231 689 aa23.1■■□□□ 1.29
TRADD-202ENST00000486556 THAP12O43422 761 aa23.1■■□□□ 1.29
TRADD-202ENST00000486556 BUB1BO60566 1050 aaPredicted RBP23.1■■□□□ 1.29
TRADD-202ENST00000486556 TFRCP02786 760 aaKnown RBP23.1■■□□□ 1.29
TRADD-202ENST00000486556 MYCNP04198 464 aaPredicted RBP23.1■■□□□ 1.29
TRADD-202ENST00000486556 PAFAH1B1P43034 410 aa23.1■■□□□ 1.29
TRADD-202ENST00000486556 ITIH3Q06033 890 aa23.1■■□□□ 1.29
TRADD-202ENST00000486556 XKR4Q5GH76 650 aa23.1■■□□□ 1.29
TRADD-202ENST00000486556 ZNF572Q7Z3I7 529 aaPredicted RBP23.1■■□□□ 1.29
TRADD-202ENST00000486556 NT5DC3Q86UY8 548 aa23.1■■□□□ 1.29
TRADD-202ENST00000486556 BEST2Q8NFU1 509 aa23.1■■□□□ 1.29
TRADD-202ENST00000486556 COG1Q8WTW3 980 aa23.1■■□□□ 1.29
TRADD-202ENST00000486556 CYFIP2Q96F07 1278 aa23.1■■□□□ 1.29
TRADD-202ENST00000486556 CAPZA3Q96KX2 299 aa23.1■■□□□ 1.29
TRADD-202ENST00000486556 MMS19Q96T76 1030 aa23.1■■□□□ 1.29
TRADD-202ENST00000486556 TSEN34Q9BSV6 310 aaKnown RBP23.1■■□□□ 1.29
TRADD-202ENST00000486556 NXF3Q9H4D5 531 aaKnown RBP23.1■■□□□ 1.29
TRADD-202ENST00000486556 STXBP5LQ9Y2K9 1186 aa23.1■■□□□ 1.29
TRADD-202ENST00000486556 MOXD2PA6NHM9 499 aa23.1■■□□□ 1.29
TRADD-202ENST00000486556 RPS6KA5O75582 802 aa23.1■■□□□ 1.29
TRADD-202ENST00000486556 RECQL4O94761 1208 aa23.1■■□□□ 1.29
TRADD-202ENST00000486556 KIF4AO95239 1232 aa23.1■■□□□ 1.29
TRADD-202ENST00000486556 NSFP46459 744 aaKnown RBP23.1■■□□□ 1.29
TRADD-202ENST00000486556 MYO1EQ12965 1108 aa23.1■■□□□ 1.29
TRADD-202ENST00000486556 PTGISQ16647 500 aa23.1■■□□□ 1.29
TRADD-202ENST00000486556 MCOLN2Q8IZK6 566 aa23.1■■□□□ 1.29
TRADD-202ENST00000486556 CAGE1Q8TC20 777 aa23.1■■□□□ 1.29
TRADD-202ENST00000486556 SENP6Q9GZR1 1112 aaPredicted RBP23.1■■□□□ 1.29
TRADD-202ENST00000486556 POLIQ9UNA4 740 aa23.1■■□□□ 1.29
TRADD-202ENST00000486556 COG5Q9UP83 839 aa23.1■■□□□ 1.29
TRADD-202ENST00000486556 HES2Q9Y543 173 aa23.1■■□□□ 1.29
TRADD-202ENST00000486556 XPOTO43592 962 aaKnown RBP23.09■■□□□ 1.29
TRADD-202ENST00000486556 CALCAP01258 141 aa23.09■■□□□ 1.29
TRADD-202ENST00000486556 PAEPP09466 180 aa23.09■■□□□ 1.29
TRADD-202ENST00000486556 ITGA7Q13683 1181 aa23.09■■□□□ 1.29
TRADD-202ENST00000486556 TEX35Q5T0J7 233 aa23.09■■□□□ 1.29
TRADD-202ENST00000486556 ZNF653Q96CK0 615 aa23.09■■□□□ 1.29
TRADD-202ENST00000486556 PBKQ96KB5 322 aa23.09■■□□□ 1.29
TRADD-202ENST00000486556 ZMAT2Q96NC0 199 aaKnown RBP23.09■■□□□ 1.29
TRADD-202ENST00000486556 ZNF518BQ9C0D4 1074 aa23.09■■□□□ 1.29
TRADD-202ENST00000486556 HMX1Q9NP08 348 aaPredicted RBP23.09■■□□□ 1.29
TRADD-202ENST00000486556 AVENQ9NQS1 362 aaPredicted RBP23.09■■□□□ 1.29
TRADD-202ENST00000486556 UBQLN1Q9UMX0 589 aaKnown RBP23.09■■□□□ 1.29
TRADD-202ENST00000486556 GPR182O15218 404 aa23.08■■□□□ 1.29
TRADD-202ENST00000486556 CHRNA1P02708 482 aa23.08■■□□□ 1.29
TRADD-202ENST00000486556 KCNE1P15382 129 aa23.08■■□□□ 1.29
TRADD-202ENST00000486556 ACLYP53396 1101 aa23.08■■□□□ 1.29
TRADD-202ENST00000486556 NOMO3P69849 1222 aa23.08■■□□□ 1.29
TRADD-202ENST00000486556 MGAT3Q09327 533 aa23.08■■□□□ 1.29
TRADD-202ENST00000486556 PTK7Q13308 1070 aa23.08■■□□□ 1.29
TRADD-202ENST00000486556 CFAP221Q4G0U5 840 aa23.08■■□□□ 1.29
TRADD-202ENST00000486556 CCDC181Q5TID7 509 aa23.08■■□□□ 1.29
TRADD-202ENST00000486556 TWF2Q6IBS0 349 aaKnown RBP23.08■■□□□ 1.29
TRADD-202ENST00000486556 C11orf63Q6NUN7 778 aa23.08■■□□□ 1.29
TRADD-202ENST00000486556 SCARA5Q6ZMJ2 495 aa23.08■■□□□ 1.29
TRADD-202ENST00000486556 ZNF296Q8WUU4 475 aaPredicted RBP23.08■■□□□ 1.29
TRADD-202ENST00000486556 HES6Q96HZ4 224 aa23.08■■□□□ 1.29
TRADD-202ENST00000486556 PCDHGC3Q9UN70 934 aa23.08■■□□□ 1.29
TRADD-202ENST00000486556 LSM8O95777 96 aaKnown RBP23.08■■□□□ 1.28
TRADD-202ENST00000486556 CD4P01730 458 aa23.08■■□□□ 1.28
TRADD-202ENST00000486556 CXCR5P32302 372 aa23.08■■□□□ 1.28
TRADD-202ENST00000486556 NAA35Q5VZE5 725 aa23.08■■□□□ 1.28
TRADD-202ENST00000486556 PHF13Q86YI8 300 aaPredicted RBP23.08■■□□□ 1.28
TRADD-202ENST00000486556 LRRC52Q8N7C0 313 aa23.08■■□□□ 1.28
TRADD-202ENST00000486556 CPA5Q8WXQ8 436 aa23.08■■□□□ 1.28
TRADD-202ENST00000486556 CNOT8Q9UFF9 292 aaKnown RBP23.08■■□□□ 1.28
TRADD-202ENST00000486556 ST3GAL5Q9UNP4 418 aa23.08■■□□□ 1.28
TRADD-202ENST00000486556 IPPQ9Y573 584 aa23.08■■□□□ 1.28
TRADD-202ENST00000486556 RALGAPA2Q2PPJ7 1873 aa23.07■■□□□ 1.28
TRADD-202ENST00000486556 MED7O43513 233 aa23.07■■□□□ 1.28
TRADD-202ENST00000486556 INHAP05111 366 aa23.07■■□□□ 1.28
TRADD-202ENST00000486556 AKAP5P24588 427 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms