RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 MATR3P43243 847 aaKnown RBP eCLIP11.56□□□□□ -0.56
HMGN1-215ENST00000485550 ARPP19P56211 112 aa11.56□□□□□ -0.56
HMGN1-215ENST00000485550 ADCY1Q08828 1119 aa11.56□□□□□ -0.56
HMGN1-215ENST00000485550 STRN3Q13033 797 aa11.56□□□□□ -0.56
HMGN1-215ENST00000485550 RAB33AQ14088 237 aa11.56□□□□□ -0.56
HMGN1-215ENST00000485550 LAIR1Q6GTX8 287 aa11.56□□□□□ -0.56
HMGN1-215ENST00000485550 MPZL3Q6UWV2 235 aa11.56□□□□□ -0.56
HMGN1-215ENST00000485550 ALKAL1Q6UXT8 129 aa11.56□□□□□ -0.56
HMGN1-215ENST00000485550 ZNF852Q6ZMS4 543 aa11.56□□□□□ -0.56
HMGN1-215ENST00000485550 PRR23CQ6ZRP0 262 aa11.56□□□□□ -0.56
HMGN1-215ENST00000485550 TMEM130Q8N3G9 435 aa11.56□□□□□ -0.56
HMGN1-215ENST00000485550 SYT2Q8N9I0 419 aaPredicted RBP11.56□□□□□ -0.56
HMGN1-215ENST00000485550 C18orf25Q96B23 403 aaPredicted RBP11.56□□□□□ -0.56
HMGN1-215ENST00000485550 DDX27Q96GQ7 796 aaKnown RBP11.56□□□□□ -0.56
HMGN1-215ENST00000485550 UROC1Q96N76 676 aa11.56□□□□□ -0.56
HMGN1-215ENST00000485550 NELL2Q99435 816 aa11.56□□□□□ -0.56
HMGN1-215ENST00000485550 FAM126AQ9BYI3 521 aaPredicted RBP11.56□□□□□ -0.56
HMGN1-215ENST00000485550 UPF2Q9HAU5 1272 aaKnown RBP11.56□□□□□ -0.56
HMGN1-215ENST00000485550 TOPORSQ9NS56 1045 aaPredicted RBP11.56□□□□□ -0.56
HMGN1-215ENST00000485550 SEMA4GQ9NTN9 838 aa11.56□□□□□ -0.56
HMGN1-215ENST00000485550 ANKFY1Q9P2R3 1169 aa11.56□□□□□ -0.56
HMGN1-215ENST00000485550 SMC3Q9UQE7 1217 aa11.56□□□□□ -0.56
HMGN1-215ENST00000485550 FRYQ5TBA9 3013 aa11.55□□□□□ -0.56
HMGN1-215ENST00000485550 TMEM189-UBE2V1I3L0A0 370 aa11.55□□□□□ -0.56
HMGN1-215ENST00000485550 ABLIM1O14639 778 aa11.55□□□□□ -0.56
HMGN1-215ENST00000485550 MEFVO15553 781 aaPredicted RBP11.55□□□□□ -0.56
HMGN1-215ENST00000485550 TRAPPC3O43617 180 aa11.55□□□□□ -0.56
HMGN1-215ENST00000485550 HNRNPA1P09651 372 aaKnown RBP eCLIP11.55□□□□□ -0.56
HMGN1-215ENST00000485550 PLS3P13797 630 aa11.55□□□□□ -0.56
HMGN1-215ENST00000485550 PROZP22891 400 aa11.55□□□□□ -0.56
HMGN1-215ENST00000485550 GUCY2CP25092 1073 aa11.55□□□□□ -0.56
HMGN1-215ENST00000485550 SMTNP53814 917 aa11.55□□□□□ -0.56
HMGN1-215ENST00000485550 SLC12A3P55017 1021 aa11.55□□□□□ -0.56
HMGN1-215ENST00000485550 SPAG1Q07617 926 aa11.55□□□□□ -0.56
HMGN1-215ENST00000485550 DMWDQ09019 674 aa11.55□□□□□ -0.56
HMGN1-215ENST00000485550 XKR4Q5GH76 650 aa11.55□□□□□ -0.56
HMGN1-215ENST00000485550 HYIQ5T013 277 aa11.55□□□□□ -0.56
HMGN1-215ENST00000485550 LARP1BQ659C4 914 aaKnown RBP11.55□□□□□ -0.56
HMGN1-215ENST00000485550 PDXDC1Q6P996 788 aa11.55□□□□□ -0.56
HMGN1-215ENST00000485550 ANKS3Q6ZW76 656 aa11.55□□□□□ -0.56
HMGN1-215ENST00000485550 NPAS3Q8IXF0 933 aa11.55□□□□□ -0.56
HMGN1-215ENST00000485550 TMEM161BQ8NDZ6 487 aa11.55□□□□□ -0.56
HMGN1-215ENST00000485550 SPIRE2Q8WWL2 714 aa11.55□□□□□ -0.56
HMGN1-215ENST00000485550 MCRS1Q96EZ8 462 aa11.55□□□□□ -0.56
HMGN1-215ENST00000485550 NTPCRQ9BSD7 190 aaKnown RBP11.55□□□□□ -0.56
HMGN1-215ENST00000485550 C17orf75Q9HAS0 396 aa11.55□□□□□ -0.56
HMGN1-215ENST00000485550 DNMT3BQ9UBC3 853 aaKnown RBP11.55□□□□□ -0.56
HMGN1-215ENST00000485550 MTRRQ9UBK8 725 aa11.55□□□□□ -0.56
HMGN1-215ENST00000485550 ANGPTL2Q9UKU9 493 aa11.55□□□□□ -0.56
HMGN1-215ENST00000485550 MRPS17Q9Y2R5 130 aaKnown RBP11.55□□□□□ -0.56
HMGN1-215ENST00000485550 NUB1Q9Y5A7 615 aa11.55□□□□□ -0.56
HMGN1-215ENST00000485550 ZFYVE26Q68DK2 2539 aa11.54□□□□□ -0.56
HMGN1-215ENST00000485550 CEP295Q9C0D2 2601 aa11.54□□□□□ -0.56
HMGN1-215ENST00000485550 XYLBO75191 536 aa11.54□□□□□ -0.56
HMGN1-215ENST00000485550 TOM1L1O75674 476 aa11.54□□□□□ -0.56
HMGN1-215ENST00000485550 RETP07949 1114 aa11.54□□□□□ -0.56
HMGN1-215ENST00000485550 MAPTP10636 758 aaKnown RBP11.54□□□□□ -0.56
HMGN1-215ENST00000485550 NRLP54845 237 aa11.54□□□□□ -0.56
HMGN1-215ENST00000485550 GRIN1Q05586 938 aa11.54□□□□□ -0.56
HMGN1-215ENST00000485550 SRSF5Q13243 272 aaKnown RBP11.54□□□□□ -0.56
HMGN1-215ENST00000485550 SIM2Q14190 667 aaPredicted RBP11.54□□□□□ -0.56
HMGN1-215ENST00000485550 GRM2Q14416 872 aa11.54□□□□□ -0.56
HMGN1-215ENST00000485550 SLC10A6Q3KNW5 377 aa11.54□□□□□ -0.56
HMGN1-215ENST00000485550 TMEM119Q4V9L6 283 aa11.54□□□□□ -0.56
HMGN1-215ENST00000485550 PABPC1LQ4VXU2 614 aaKnown RBP11.54□□□□□ -0.56
HMGN1-215ENST00000485550 ARSHQ5FYA8 562 aa11.54□□□□□ -0.56
HMGN1-215ENST00000485550 N4BP2L1Q5TBK1 243 aaPredicted RBP11.54□□□□□ -0.56
HMGN1-215ENST00000485550 CELF5Q8N6W0 485 aaKnown RBP11.54□□□□□ -0.56
HMGN1-215ENST00000485550 BICD1Q96G01 975 aa11.54□□□□□ -0.56
HMGN1-215ENST00000485550 TIPINQ9BVW5 301 aa11.54□□□□□ -0.56
HMGN1-215ENST00000485550 CHRDQ9H2X0 955 aa11.54□□□□□ -0.56
HMGN1-215ENST00000485550 SLC38A7Q9NVC3 462 aa11.54□□□□□ -0.56
HMGN1-215ENST00000485550 CNTN3Q9P232 1028 aa11.54□□□□□ -0.56
HMGN1-215ENST00000485550 BACE2Q9Y5Z0 518 aa11.54□□□□□ -0.56
HMGN1-215ENST00000485550 CLDN3O15551 220 aa11.53□□□□□ -0.56
HMGN1-215ENST00000485550 LRP3O75074 770 aa11.53□□□□□ -0.56
HMGN1-215ENST00000485550 ECI2O75521 394 aa11.53□□□□□ -0.56
HMGN1-215ENST00000485550 CXCL8P10145 99 aa11.53□□□□□ -0.56
HMGN1-215ENST00000485550 KCNE1P15382 129 aa11.53□□□□□ -0.56
HMGN1-215ENST00000485550 PMLP29590 882 aa11.53□□□□□ -0.56
HMGN1-215ENST00000485550 HOXA9P31269 272 aa11.53□□□□□ -0.56
HMGN1-215ENST00000485550 ELF1P32519 619 aa11.53□□□□□ -0.56
HMGN1-215ENST00000485550 UBA7P41226 1012 aa11.53□□□□□ -0.56
HMGN1-215ENST00000485550 ROR1Q01973 937 aa11.53□□□□□ -0.56
HMGN1-215ENST00000485550 NOLC1Q14978 699 aaKnown RBP eCLIP11.53□□□□□ -0.56
HMGN1-215ENST00000485550 CSRP2Q16527 193 aa11.53□□□□□ -0.56
HMGN1-215ENST00000485550 SLC5A9Q2M3M2 681 aa11.53□□□□□ -0.56
HMGN1-215ENST00000485550 UVSSAQ2YD98 709 aa11.53□□□□□ -0.56
HMGN1-215ENST00000485550 ARL6IP4Q66PJ3 421 aaKnown RBP11.53□□□□□ -0.56
HMGN1-215ENST00000485550 TANGO2Q6ICL3 276 aa11.53□□□□□ -0.56
HMGN1-215ENST00000485550 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.53□□□□□ -0.56
HMGN1-215ENST00000485550 GPBP1Q86WP2 473 aa11.53□□□□□ -0.56
HMGN1-215ENST00000485550 LRRC15Q8TF66 581 aa11.53□□□□□ -0.56
HMGN1-215ENST00000485550 HAPLN2Q9GZV7 340 aa11.53□□□□□ -0.56
HMGN1-215ENST00000485550 ZHX3Q9H4I2 956 aa11.53□□□□□ -0.56
HMGN1-215ENST00000485550 TUBGCP4Q9UGJ1 667 aa11.53□□□□□ -0.56
HMGN1-215ENST00000485550 KCNG1Q9UIX4 513 aa11.53□□□□□ -0.56
HMGN1-215ENST00000485550 MRPS23Q9Y3D9 190 aaKnown RBP11.53□□□□□ -0.56
HMGN1-215ENST00000485550 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.53□□□□□ -0.56
HMGN1-215ENST00000485550 NUP205Q92621 2012 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms