RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 CYP3A5P20815 502 aa14.21□□□□□ -0.13
HDAC6-227ENST00000485102 GDI1P31150 447 aa14.21□□□□□ -0.13
HDAC6-227ENST00000485102 TOB1P50616 345 aaPredicted RBP14.21□□□□□ -0.13
HDAC6-227ENST00000485102 ARPP19P56211 112 aa14.21□□□□□ -0.13
HDAC6-227ENST00000485102 MCL1Q07820 350 aa14.21□□□□□ -0.13
HDAC6-227ENST00000485102 FCHO2Q0JRZ9 810 aa14.21□□□□□ -0.13
HDAC6-227ENST00000485102 GRM2Q14416 872 aa14.21□□□□□ -0.13
HDAC6-227ENST00000485102 ZBTB6Q15916 424 aa14.21□□□□□ -0.13
HDAC6-227ENST00000485102 KRT79Q5XKE5 535 aa14.21□□□□□ -0.13
HDAC6-227ENST00000485102 TSPAN18Q96SJ8 248 aa14.21□□□□□ -0.13
HDAC6-227ENST00000485102 RTKNQ9BST9 563 aa14.21□□□□□ -0.13
HDAC6-227ENST00000485102 RUSC1Q9BVN2 902 aa14.21□□□□□ -0.13
HDAC6-227ENST00000485102 LRRC3Q9BY71 257 aa14.21□□□□□ -0.13
HDAC6-227ENST00000485102 LMAN1LQ9HAT1 526 aa14.21□□□□□ -0.13
HDAC6-227ENST00000485102 ASAH2Q9NR71 780 aa14.21□□□□□ -0.13
HDAC6-227ENST00000485102 TTC26A0AVF1 554 aa14.2□□□□□ -0.14
HDAC6-227ENST00000485102 ZNF263O14978 683 aa14.2□□□□□ -0.14
HDAC6-227ENST00000485102 CHADO15335 359 aa14.2□□□□□ -0.14
HDAC6-227ENST00000485102 MARCKSP29966 332 aaPredicted RBP14.2□□□□□ -0.14
HDAC6-227ENST00000485102 MCM4P33991 863 aa14.2□□□□□ -0.14
HDAC6-227ENST00000485102 SMTNP53814 917 aa14.2□□□□□ -0.14
HDAC6-227ENST00000485102 TWF1Q12792 350 aa14.2□□□□□ -0.14
HDAC6-227ENST00000485102 NOLC1Q14978 699 aaKnown RBP eCLIP14.2□□□□□ -0.14
HDAC6-227ENST00000485102 HYIQ5T013 277 aa14.2□□□□□ -0.14
HDAC6-227ENST00000485102 LAIR1Q6GTX8 287 aa14.2□□□□□ -0.14
HDAC6-227ENST00000485102 RNF19BQ6ZMZ0 732 aa14.2□□□□□ -0.14
HDAC6-227ENST00000485102 CCDC83Q8IWF9 413 aa14.2□□□□□ -0.14
HDAC6-227ENST00000485102 HS6ST3Q8IZP7 471 aa14.2□□□□□ -0.14
HDAC6-227ENST00000485102 SPEM1Q8N4L4 309 aa14.2□□□□□ -0.14
HDAC6-227ENST00000485102 TMEM161BQ8NDZ6 487 aa14.2□□□□□ -0.14
HDAC6-227ENST00000485102 ZSCAN18Q8TBC5 510 aaPredicted RBP14.2□□□□□ -0.14
HDAC6-227ENST00000485102 ZBTB45Q96K62 511 aaPredicted RBP14.2□□□□□ -0.14
HDAC6-227ENST00000485102 ZSCAN31Q96LW9 406 aaPredicted RBP14.2□□□□□ -0.14
HDAC6-227ENST00000485102 MMTAG2Q9BU76 263 aaKnown RBP14.2□□□□□ -0.14
HDAC6-227ENST00000485102 KCND2Q9NZV8 630 aa14.2□□□□□ -0.14
HDAC6-227ENST00000485102 HSFX1Q9UBD0 423 aa14.2□□□□□ -0.14
HDAC6-227ENST00000485102 GMEB2Q9UKD1 530 aa14.2□□□□□ -0.14
HDAC6-227ENST00000485102 NDRG2Q9UN36 371 aaKnown RBP14.2□□□□□ -0.14
HDAC6-227ENST00000485102 PIAS3Q9Y6X2 628 aa14.2□□□□□ -0.14
HDAC6-227ENST00000485102 MYH11P35749 1972 aa14.2□□□□□ -0.14
HDAC6-227ENST00000485102 TICRRQ7Z2Z1 1910 aa14.19□□□□□ -0.14
HDAC6-227ENST00000485102 OR6C75A6NL08 312 aa14.19□□□□□ -0.14
HDAC6-227ENST00000485102 HEPACAM2A8MVW5 462 aa14.19□□□□□ -0.14
HDAC6-227ENST00000485102 SLC16A4O15374 487 aa14.19□□□□□ -0.14
HDAC6-227ENST00000485102 CLDN3O15551 220 aa14.19□□□□□ -0.14
HDAC6-227ENST00000485102 VNN2O95498 520 aa14.19□□□□□ -0.14
HDAC6-227ENST00000485102 ADRB2P07550 413 aa14.19□□□□□ -0.14
HDAC6-227ENST00000485102 RETP07949 1114 aa14.19□□□□□ -0.14
HDAC6-227ENST00000485102 CLTAP09496 248 aa14.19□□□□□ -0.14
HDAC6-227ENST00000485102 MAPTP10636 758 aaKnown RBP14.19□□□□□ -0.14
HDAC6-227ENST00000485102 PLS3P13797 630 aa14.19□□□□□ -0.14
HDAC6-227ENST00000485102 SCP2P22307 547 aa14.19□□□□□ -0.14
HDAC6-227ENST00000485102 PAX3P23760 479 aa14.19□□□□□ -0.14
HDAC6-227ENST00000485102 WEE1P30291 646 aa14.19□□□□□ -0.14
HDAC6-227ENST00000485102 HOXA6P31267 233 aa14.19□□□□□ -0.14
HDAC6-227ENST00000485102 CNR2P34972 360 aa14.19□□□□□ -0.14
HDAC6-227ENST00000485102 VIPR2P41587 438 aa14.19□□□□□ -0.14
HDAC6-227ENST00000485102 CXCL12P48061 93 aa14.19□□□□□ -0.14
HDAC6-227ENST00000485102 YWHAHQ04917 246 aaPredicted RBP14.19□□□□□ -0.14
HDAC6-227ENST00000485102 STRN3Q13033 797 aa14.19□□□□□ -0.14
HDAC6-227ENST00000485102 GPR17Q13304 367 aa14.19□□□□□ -0.14
HDAC6-227ENST00000485102 PLD1Q13393 1074 aa14.19□□□□□ -0.14
HDAC6-227ENST00000485102 GNL2Q13823 731 aaKnown RBP14.19□□□□□ -0.14
HDAC6-227ENST00000485102 NBR1Q14596 966 aa14.19□□□□□ -0.14
HDAC6-227ENST00000485102 IL17AQ16552 155 aa14.19□□□□□ -0.14
HDAC6-227ENST00000485102 KYAT1Q16773 422 aa14.19□□□□□ -0.14
HDAC6-227ENST00000485102 KCNK18Q7Z418 384 aa14.19□□□□□ -0.14
HDAC6-227ENST00000485102 SHKBP1Q8TBC3 707 aa14.19□□□□□ -0.14
HDAC6-227ENST00000485102 C8orf33Q9H7E9 229 aaPredicted RBP14.19□□□□□ -0.14
HDAC6-227ENST00000485102 PARD6AQ9NPB6 346 aa14.19□□□□□ -0.14
HDAC6-227ENST00000485102 CDV3Q9UKY7 258 aaKnown RBP14.19□□□□□ -0.14
HDAC6-227ENST00000485102 RAB23Q9ULC3 237 aa14.19□□□□□ -0.14
HDAC6-227ENST00000485102 ASB3Q9Y575 518 aa14.19□□□□□ -0.14
HDAC6-227ENST00000485102 PCDHB6Q9Y5E3 794 aa14.19□□□□□ -0.14
HDAC6-227ENST00000485102 SDK1Q7Z5N4 2213 aa14.18□□□□□ -0.14
HDAC6-227ENST00000485102 SFI1A8K8P3 1242 aa14.18□□□□□ -0.14
HDAC6-227ENST00000485102 MYL4P12829 197 aa14.18□□□□□ -0.14
HDAC6-227ENST00000485102 CPB1P15086 417 aa14.18□□□□□ -0.14
HDAC6-227ENST00000485102 TYMPP19971 482 aa14.18□□□□□ -0.14
HDAC6-227ENST00000485102 MYBPC2Q14324 1141 aa14.18□□□□□ -0.14
HDAC6-227ENST00000485102 GAS6Q14393 721 aa14.18□□□□□ -0.14
HDAC6-227ENST00000485102 TEAD2Q15562 447 aa14.18□□□□□ -0.14
HDAC6-227ENST00000485102 DTHD1Q6ZMT9 781 aa14.18□□□□□ -0.14
HDAC6-227ENST00000485102 TMC8Q8IU68 726 aa14.18□□□□□ -0.14
HDAC6-227ENST00000485102 SYT2Q8N9I0 419 aaPredicted RBP14.18□□□□□ -0.14
HDAC6-227ENST00000485102 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.18□□□□□ -0.14
HDAC6-227ENST00000485102 SH2B1Q9NRF2 756 aaPredicted RBP14.18□□□□□ -0.14
HDAC6-227ENST00000485102 OBP2AQ9NY56 170 aa14.18□□□□□ -0.14
HDAC6-227ENST00000485102 UBQLN1Q9UMX0 589 aaKnown RBP14.18□□□□□ -0.14
HDAC6-227ENST00000485102 YIPF1Q9Y548 306 aa14.18□□□□□ -0.14
HDAC6-227ENST00000485102 RALGAPA1Q6GYQ0 2036 aa14.18□□□□□ -0.14
HDAC6-227ENST00000485102 NCANO14594 1321 aa14.17□□□□□ -0.14
HDAC6-227ENST00000485102 MYBPHLA2RUH7 354 aa14.17□□□□□ -0.14
HDAC6-227ENST00000485102 PP2D1A8MPX8 630 aa14.17□□□□□ -0.14
HDAC6-227ENST00000485102 H0YCG3 227 aa14.17□□□□□ -0.14
HDAC6-227ENST00000485102 FOXD2O60548 495 aaPredicted RBP14.17□□□□□ -0.14
HDAC6-227ENST00000485102 CCNE1P24864 410 aa14.17□□□□□ -0.14
HDAC6-227ENST00000485102 CDC25AP30304 524 aa14.17□□□□□ -0.14
HDAC6-227ENST00000485102 EPHB3P54753 998 aa14.17□□□□□ -0.14
HDAC6-227ENST00000485102 LRRC32Q14392 662 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms