RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	CMTM4	Q8IZR5	234 aa		4.87	□□□□□ -1.63
VPS8-223	ENST00000485024	OR52N2	Q8NGI0	321 aa		4.87	□□□□□ -1.63
VPS8-223	ENST00000485024	OR5AN1	Q8NGI8	311 aa		4.87	□□□□□ -1.63
VPS8-223	ENST00000485024	HPS3	Q969F9	1004 aa		4.87	□□□□□ -1.63
VPS8-223	ENST00000485024	TAAR9	Q96RI9	348 aa		4.87	□□□□□ -1.63
VPS8-223	ENST00000485024	ADAM2	Q99965	735 aa		4.87	□□□□□ -1.63
VPS8-223	ENST00000485024	TEX101	Q9BY14	249 aa		4.87	□□□□□ -1.63
VPS8-223	ENST00000485024	HAPLN2	Q9GZV7	340 aa		4.87	□□□□□ -1.63
VPS8-223	ENST00000485024	SLC12A5	Q9H2X9	1139 aa		4.87	□□□□□ -1.63
VPS8-223	ENST00000485024	ANLN	Q9NQW6	1124 aa		4.87	□□□□□ -1.63
VPS8-223	ENST00000485024	KCMF1	Q9P0J7	381 aa		4.87	□□□□□ -1.63
VPS8-223	ENST00000485024	DPP7	Q9UHL4	492 aa		4.87	□□□□□ -1.63
VPS8-223	ENST00000485024	PRSS50	Q9UI38	385 aa		4.87	□□□□□ -1.63
VPS8-223	ENST00000485024	EDAR	Q9UNE0	448 aa		4.87	□□□□□ -1.63
VPS8-223	ENST00000485024	LCHN	A4D1U4	455 aa		4.86	□□□□□ -1.63
VPS8-223	ENST00000485024	FAM227A	F5H4B4	570 aa		4.86	□□□□□ -1.63
VPS8-223	ENST00000485024		H3BML4	177 aa		4.86	□□□□□ -1.63
VPS8-223	ENST00000485024	PDC	P20941	246 aa		4.86	□□□□□ -1.63
VPS8-223	ENST00000485024	WAS	P42768	502 aa		4.86	□□□□□ -1.63
VPS8-223	ENST00000485024	CACNB3	P54284	484 aa		4.86	□□□□□ -1.63
VPS8-223	ENST00000485024	NPEPPS	P55786	919 aa		4.86	□□□□□ -1.63
VPS8-223	ENST00000485024	OCA2	Q04671	838 aa		4.86	□□□□□ -1.63
VPS8-223	ENST00000485024	MALL	Q13021	153 aa		4.86	□□□□□ -1.63
VPS8-223	ENST00000485024	MORC3	Q14149	939 aa		4.86	□□□□□ -1.63
VPS8-223	ENST00000485024	MYBPC3	Q14896	1274 aa		4.86	□□□□□ -1.63
VPS8-223	ENST00000485024	MAN2A1	Q16706	1144 aa		4.86	□□□□□ -1.63
VPS8-223	ENST00000485024	MUM1L1	Q5H9M0	696 aa		4.86	□□□□□ -1.63
VPS8-223	ENST00000485024	ABHD17B	Q5VST6	288 aa		4.86	□□□□□ -1.63
VPS8-223	ENST00000485024	RUSC1-AS1	Q66K80	236 aa		4.86	□□□□□ -1.63
VPS8-223	ENST00000485024	B3GNT9	Q6UX72	402 aa		4.86	□□□□□ -1.63
VPS8-223	ENST00000485024	BMP8A	Q7Z5Y6	402 aa		4.86	□□□□□ -1.63
VPS8-223	ENST00000485024	GLB1L2	Q8IW92	636 aa		4.86	□□□□□ -1.63
VPS8-223	ENST00000485024	SLC44A3	Q8N4M1	653 aa		4.86	□□□□□ -1.63
VPS8-223	ENST00000485024	CAMKK1	Q8N5S9	505 aa		4.86	□□□□□ -1.63
VPS8-223	ENST00000485024	CPEB3	Q8NE35	698 aa	Known RBP	4.86	□□□□□ -1.63
VPS8-223	ENST00000485024	DIS3L	Q8TF46	1054 aa	Known RBP	4.86	□□□□□ -1.63
VPS8-223	ENST00000485024	SLC9A6	Q92581	669 aa		4.86	□□□□□ -1.63
VPS8-223	ENST00000485024	COA7	Q96BR5	231 aa		4.86	□□□□□ -1.63
VPS8-223	ENST00000485024	MVB12A	Q96EY5	273 aa		4.86	□□□□□ -1.63
VPS8-223	ENST00000485024	TNIP3	Q96KP6	325 aa		4.86	□□□□□ -1.63
VPS8-223	ENST00000485024	ADI1	Q9BV57	179 aa		4.86	□□□□□ -1.63
VPS8-223	ENST00000485024	DDX21	Q9NR30	783 aa	Known RBP eCLIP	4.86	□□□□□ -1.63
VPS8-223	ENST00000485024	PCDHB6	Q9Y5E3	794 aa		4.86	□□□□□ -1.63
VPS8-223	ENST00000485024	CDY2A	Q9Y6F7	541 aa		4.86	□□□□□ -1.63
VPS8-223	ENST00000485024	AQR	O60306	1485 aa	Known RBP eCLIP	4.86	□□□□□ -1.63
VPS8-223	ENST00000485024	URB2	Q14146	1524 aa	Known RBP	4.86	□□□□□ -1.63
VPS8-223	ENST00000485024	GAGE12B	A1L429	117 aa		4.85	□□□□□ -1.63
VPS8-223	ENST00000485024	GAGE12H	A6NDE8	117 aa		4.85	□□□□□ -1.63
VPS8-223	ENST00000485024	WIPF3	A6NGB9	483 aa		4.85	□□□□□ -1.63
VPS8-223	ENST00000485024	FAM171A2	A8MVW0	826 aa		4.85	□□□□□ -1.63
VPS8-223	ENST00000485024	ZBED1	O96006	694 aa		4.85	□□□□□ -1.63
VPS8-223	ENST00000485024	LDHA	P00338	332 aa	Known RBP	4.85	□□□□□ -1.63
VPS8-223	ENST00000485024	LPL	P06858	475 aa		4.85	□□□□□ -1.63
VPS8-223	ENST00000485024	EGR2	P11161	476 aa	Predicted RBP	4.85	□□□□□ -1.63
VPS8-223	ENST00000485024	FAM193A	P78312	1265 aa		4.85	□□□□□ -1.63
VPS8-223	ENST00000485024	PPARA	Q07869	468 aa		4.85	□□□□□ -1.63
VPS8-223	ENST00000485024	GRM3	Q14832	879 aa		4.85	□□□□□ -1.63
VPS8-223	ENST00000485024	ZRSR2	Q15696	482 aa	Known RBP	4.85	□□□□□ -1.63
VPS8-223	ENST00000485024	PGS1	Q32NB8	556 aa		4.85	□□□□□ -1.63
VPS8-223	ENST00000485024	ZBTB41	Q5SVQ8	909 aa		4.85	□□□□□ -1.63
VPS8-223	ENST00000485024	BTNL9	Q6UXG8	535 aa		4.85	□□□□□ -1.63
VPS8-223	ENST00000485024	MIGA2	Q7L4E1	593 aa		4.85	□□□□□ -1.63
VPS8-223	ENST00000485024	DENND1C	Q8IV53	801 aa		4.85	□□□□□ -1.63
VPS8-223	ENST00000485024	GRAMD1C	Q8IYS0	662 aa		4.85	□□□□□ -1.63
VPS8-223	ENST00000485024	PDPR	Q8NCN5	879 aa		4.85	□□□□□ -1.63
VPS8-223	ENST00000485024	GAB3	Q8WWW8	586 aa		4.85	□□□□□ -1.63
VPS8-223	ENST00000485024	HDAC10	Q969S8	669 aa		4.85	□□□□□ -1.63
VPS8-223	ENST00000485024	CPPED1	Q9BRF8	314 aa	Predicted RBP	4.85	□□□□□ -1.63
VPS8-223	ENST00000485024	NOL10	Q9BSC4	688 aa	Known RBP	4.85	□□□□□ -1.63
VPS8-223	ENST00000485024	GTPBP4	Q9BZE4	634 aa	Known RBP	4.85	□□□□□ -1.63
VPS8-223	ENST00000485024	PITHD1	Q9GZP4	211 aa	Predicted RBP	4.85	□□□□□ -1.63
VPS8-223	ENST00000485024	TMEM60	Q9H2L4	133 aa		4.85	□□□□□ -1.63
VPS8-223	ENST00000485024	MTG2	Q9H4K7	406 aa		4.85	□□□□□ -1.63
VPS8-223	ENST00000485024	GREM2	Q9H772	168 aa		4.85	□□□□□ -1.63
VPS8-223	ENST00000485024	ZNF580	Q9UK33	172 aa		4.85	□□□□□ -1.63
VPS8-223	ENST00000485024	CFAP20	Q9Y6A4	193 aa	Known RBP	4.85	□□□□□ -1.63
VPS8-223	ENST00000485024	SMARCA4	P51532	1647 aa		4.84	□□□□□ -1.63
VPS8-223	ENST00000485024	BAZ1B	Q9UIG0	1483 aa	Known RBP	4.84	□□□□□ -1.63
VPS8-223	ENST00000485024		A0A0A6YYJ9	748 aa		4.84	□□□□□ -1.63
VPS8-223	ENST00000485024	LEFTY2	O00292	366 aa		4.84	□□□□□ -1.63
VPS8-223	ENST00000485024	SLC16A6	O15403	523 aa		4.84	□□□□□ -1.63
VPS8-223	ENST00000485024	OPHN1	O60890	802 aa		4.84	□□□□□ -1.63
VPS8-223	ENST00000485024	PCDH8	O95206	1070 aa		4.84	□□□□□ -1.63
VPS8-223	ENST00000485024	BLOC1S1	P78537	153 aa		4.84	□□□□□ -1.63
VPS8-223	ENST00000485024	CDK17	Q00537	523 aa		4.84	□□□□□ -1.63
VPS8-223	ENST00000485024	MEF2A	Q02078	507 aa	Predicted RBP	4.84	□□□□□ -1.63
VPS8-223	ENST00000485024	DGKD	Q16760	1214 aa		4.84	□□□□□ -1.63
VPS8-223	ENST00000485024	LMBR1L	Q6UX01	489 aa		4.84	□□□□□ -1.63
VPS8-223	ENST00000485024	PRR18	Q8N4B5	295 aa		4.84	□□□□□ -1.63
VPS8-223	ENST00000485024	PPM1N	Q8N819	430 aa		4.84	□□□□□ -1.63
VPS8-223	ENST00000485024	TIFA	Q96CG3	184 aa		4.84	□□□□□ -1.63
VPS8-223	ENST00000485024	ELAC2	Q9BQ52	826 aa	Known RBP	4.84	□□□□□ -1.63
VPS8-223	ENST00000485024	TMPRSS11E	Q9UL52	423 aa		4.84	□□□□□ -1.63
VPS8-223	ENST00000485024	USP18	Q9UMW8	372 aa		4.84	□□□□□ -1.63
VPS8-223	ENST00000485024	SETD1A	O15047	1707 aa	Known RBP	4.83	□□□□□ -1.64
VPS8-223	ENST00000485024	ADAMTSL3	P82987	1691 aa		4.83	□□□□□ -1.64
VPS8-223	ENST00000485024	EIF4G3	O43432	1585 aa	Known RBP	4.83	□□□□□ -1.64
VPS8-223	ENST00000485024	MAST3	O60307	1309 aa		4.83	□□□□□ -1.64
VPS8-223	ENST00000485024	IFRD1	O00458	451 aa	Predicted RBP	4.83	□□□□□ -1.64
VPS8-223	ENST00000485024	PHF2	O75151	1096 aa		4.83	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms