RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 TRIM5Q9C035 493 aa15.19■□□□□ 0.02
SRSF6-202ENST00000483871 INTS2Q9H0H0 1204 aaKnown RBP15.19■□□□□ 0.02
SRSF6-202ENST00000483871 CERS4Q9HA82 394 aa15.19■□□□□ 0.02
SRSF6-202ENST00000483871 NXF1Q9UBU9 619 aaKnown RBP15.19■□□□□ 0.02
SRSF6-202ENST00000483871 ADAM28Q9UKQ2 775 aa15.19■□□□□ 0.02
SRSF6-202ENST00000483871 POLIQ9UNA4 740 aa15.19■□□□□ 0.02
SRSF6-202ENST00000483871 SNX9Q9Y5X1 595 aa15.19■□□□□ 0.02
SRSF6-202ENST00000483871 GTPBP10A4D1E9 387 aaKnown RBP15.18■□□□□ 0.02
SRSF6-202ENST00000483871 ATICP31939 592 aa15.18■□□□□ 0.02
SRSF6-202ENST00000483871 NOP14P78316 857 aaKnown RBP15.18■□□□□ 0.02
SRSF6-202ENST00000483871 TAP1Q03518 808 aa15.18■□□□□ 0.02
SRSF6-202ENST00000483871 GSE1Q14687 1217 aa15.18■□□□□ 0.02
SRSF6-202ENST00000483871 PHLDB3Q6NSJ2 640 aa15.18■□□□□ 0.02
SRSF6-202ENST00000483871 DPY19L2P1Q6NXN4 242 aa15.18■□□□□ 0.02
SRSF6-202ENST00000483871 TRIM65Q6PJ69 517 aa15.18■□□□□ 0.02
SRSF6-202ENST00000483871 ARHGEF19Q8IW93 802 aa15.18■□□□□ 0.02
SRSF6-202ENST00000483871 SLC39A11Q8N1S5 342 aa15.18■□□□□ 0.02
SRSF6-202ENST00000483871 IGSF21Q96ID5 467 aa15.18■□□□□ 0.02
SRSF6-202ENST00000483871 GRPEL1Q9HAV7 217 aa15.18■□□□□ 0.02
SRSF6-202ENST00000483871 MSRAQ9UJ68 235 aa15.18■□□□□ 0.02
SRSF6-202ENST00000483871 SIK3Q9Y2K2 1263 aa15.18■□□□□ 0.02
SRSF6-202ENST00000483871 TIMM13Q9Y5L4 95 aaPredicted RBP15.18■□□□□ 0.02
SRSF6-202ENST00000483871 TMEM189-UBE2V1I3L0A0 370 aa15.17■□□□□ 0.02
SRSF6-202ENST00000483871 DNAJB2P25686 324 aa15.17■□□□□ 0.02
SRSF6-202ENST00000483871 BMPR1AP36894 532 aa15.17■□□□□ 0.02
SRSF6-202ENST00000483871 MYO1EQ12965 1108 aa15.17■□□□□ 0.02
SRSF6-202ENST00000483871 WDR44Q5JSH3 913 aa15.17■□□□□ 0.02
SRSF6-202ENST00000483871 TAS1R1Q7RTX1 841 aa15.17■□□□□ 0.02
SRSF6-202ENST00000483871 KLHL23Q8NBE8 558 aa15.17■□□□□ 0.02
SRSF6-202ENST00000483871 SENP8Q96LD8 212 aa15.17■□□□□ 0.02
SRSF6-202ENST00000483871 ZNF560Q96MR9 790 aa15.17■□□□□ 0.02
SRSF6-202ENST00000483871 ERGIC2Q96RQ1 377 aa15.17■□□□□ 0.02
SRSF6-202ENST00000483871 LSM14BQ9BX40 385 aaKnown RBP15.17■□□□□ 0.02
SRSF6-202ENST00000483871 SIX2Q9NPC8 291 aa15.17■□□□□ 0.02
SRSF6-202ENST00000483871 PCDHB12Q9Y5F1 795 aa15.17■□□□□ 0.02
SRSF6-202ENST00000483871 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.17■□□□□ 0.02
SRSF6-202ENST00000483871 CHD9Q3L8U1 2897 aa15.17■□□□□ 0.02
SRSF6-202ENST00000483871 SZT2Q5T011 3432 aa15.17■□□□□ 0.02
SRSF6-202ENST00000483871 EPHB6O15197 1021 aa15.16■□□□□ 0.02
SRSF6-202ENST00000483871 STAU1O95793 577 aaKnown RBP15.16■□□□□ 0.02
SRSF6-202ENST00000483871 CTNNB1P35222 781 aa15.16■□□□□ 0.02
SRSF6-202ENST00000483871 PNPLA4P41247 253 aa15.16■□□□□ 0.02
SRSF6-202ENST00000483871 AARSP49588 968 aaKnown RBP eCLIP15.16■□□□□ 0.02
SRSF6-202ENST00000483871 CDH8P55286 799 aa15.16■□□□□ 0.02
SRSF6-202ENST00000483871 RAB30Q15771 203 aa15.16■□□□□ 0.02
SRSF6-202ENST00000483871 SV2CQ496J9 727 aa15.16■□□□□ 0.02
SRSF6-202ENST00000483871 ZNF667Q5HYK9 610 aa15.16■□□□□ 0.02
SRSF6-202ENST00000483871 PRPF38BQ5VTL8 546 aaKnown RBP15.16■□□□□ 0.02
SRSF6-202ENST00000483871 FUT10Q6P4F1 479 aa15.16■□□□□ 0.02
SRSF6-202ENST00000483871 DSTYKQ6XUX3 929 aa15.16■□□□□ 0.02
SRSF6-202ENST00000483871 SCARA5Q6ZMJ2 495 aa15.16■□□□□ 0.02
SRSF6-202ENST00000483871 RRAGAQ7L523 313 aa15.16■□□□□ 0.02
SRSF6-202ENST00000483871 KAT5Q92993 513 aa15.16■□□□□ 0.02
SRSF6-202ENST00000483871 B3GALT6Q96L58 329 aa15.16■□□□□ 0.02
SRSF6-202ENST00000483871 PCMTD1Q96MG8 357 aaPredicted RBP15.16■□□□□ 0.02
SRSF6-202ENST00000483871 MMS19Q96T76 1030 aa15.16■□□□□ 0.02
SRSF6-202ENST00000483871 ARID3AQ99856 593 aa15.16■□□□□ 0.02
SRSF6-202ENST00000483871 VN1R3Q9BXE9 311 aa15.16■□□□□ 0.02
SRSF6-202ENST00000483871 IMPG2Q9BZV3 1241 aa15.16■□□□□ 0.02
SRSF6-202ENST00000483871 VRTNQ9H8Y1 702 aa15.16■□□□□ 0.02
SRSF6-202ENST00000483871 ALG13Q9NP73 1137 aaKnown RBP15.16■□□□□ 0.02
SRSF6-202ENST00000483871 AAASQ9NRG9 546 aa15.16■□□□□ 0.02
SRSF6-202ENST00000483871 FAM207AQ9NSI2 230 aaPredicted RBP15.16■□□□□ 0.02
SRSF6-202ENST00000483871 SPG21Q9NZD8 308 aa15.16■□□□□ 0.02
SRSF6-202ENST00000483871 NLRC5Q86WI3 1866 aa15.16■□□□□ 0.02
SRSF6-202ENST00000483871 CYB561D2O14569 222 aa15.16■□□□□ 0.02
SRSF6-202ENST00000483871 FGF18O76093 207 aa15.16■□□□□ 0.02
SRSF6-202ENST00000483871 NOL4O94818 638 aa15.16■□□□□ 0.02
SRSF6-202ENST00000483871 WEE2P0C1S8 567 aa15.16■□□□□ 0.02
SRSF6-202ENST00000483871 PBX1P40424 430 aa15.16■□□□□ 0.02
SRSF6-202ENST00000483871 RAP1GAPP47736 663 aa15.16■□□□□ 0.02
SRSF6-202ENST00000483871 SMAD3P84022 425 aaKnown RBP15.16■□□□□ 0.02
SRSF6-202ENST00000483871 SOWAHAQ2M3V2 549 aa15.16■□□□□ 0.02
SRSF6-202ENST00000483871 FAM171A1Q5VUB5 890 aa15.16■□□□□ 0.02
SRSF6-202ENST00000483871 PPP2R2DQ66LE6 453 aa15.16■□□□□ 0.02
SRSF6-202ENST00000483871 CEP57Q86XR8 500 aa15.16■□□□□ 0.02
SRSF6-202ENST00000483871 PPM1KQ8N3J5 372 aa15.16■□□□□ 0.02
SRSF6-202ENST00000483871 CCDC150Q8NCX0 1101 aa15.16■□□□□ 0.02
SRSF6-202ENST00000483871 TMEM169Q96HH4 297 aa15.16■□□□□ 0.02
SRSF6-202ENST00000483871 SUSD3Q96L08 255 aa15.16■□□□□ 0.02
SRSF6-202ENST00000483871 NT5C1BQ96P26 610 aa15.16■□□□□ 0.02
SRSF6-202ENST00000483871 TGS1Q96RS0 853 aaKnown RBP15.16■□□□□ 0.02
SRSF6-202ENST00000483871 SLC28A3Q9HAS3 691 aa15.16■□□□□ 0.02
SRSF6-202ENST00000483871 UBE2TQ9NPD8 197 aaPredicted RBP15.16■□□□□ 0.02
SRSF6-202ENST00000483871 GDAP2Q9NXN4 497 aa15.16■□□□□ 0.02
SRSF6-202ENST00000483871 AJAP1Q9UKB5 411 aaPredicted RBP15.16■□□□□ 0.02
SRSF6-202ENST00000483871 TRIOBPQ9H2D6 2365 aa15.15■□□□□ 0.02
SRSF6-202ENST00000483871 CBFA2T2O43439 604 aa15.15■□□□□ 0.02
SRSF6-202ENST00000483871 TKTP29401 623 aaKnown RBP15.15■□□□□ 0.02
SRSF6-202ENST00000483871 ASPAP45381 313 aa15.15■□□□□ 0.02
SRSF6-202ENST00000483871 ZNF75DP51815 510 aa15.15■□□□□ 0.02
SRSF6-202ENST00000483871 KLHDC7AQ5VTJ3 777 aa15.15■□□□□ 0.02
SRSF6-202ENST00000483871 WSCD1Q658N2 575 aa15.15■□□□□ 0.02
SRSF6-202ENST00000483871 TAF4BQ92750 862 aa15.15■□□□□ 0.02
SRSF6-202ENST00000483871 SDCBP2Q9H190 292 aa15.15■□□□□ 0.02
SRSF6-202ENST00000483871 SMYD3Q9H7B4 428 aa15.15■□□□□ 0.02
SRSF6-202ENST00000483871 APEX2Q9UBZ4 518 aa15.15■□□□□ 0.02
SRSF6-202ENST00000483871 L1RE1Q9UN81 338 aa15.15■□□□□ 0.02
SRSF6-202ENST00000483871 MYO9BQ13459 2157 aa15.14■□□□□ 0.01
SRSF6-202ENST00000483871 A0A1W2PQC6 194 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms