RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 CYP3A43Q9HB55 503 aa28.05■■■□□ 2.08
SHOX2-204ENST00000483851 CISHQ9NSE2 258 aa28.05■■■□□ 2.08
SHOX2-204ENST00000483851 RAB21Q9UL25 225 aa28.05■■■□□ 2.08
SHOX2-204ENST00000483851 GNA15P30679 374 aa28.04■■■□□ 2.08
SHOX2-204ENST00000483851 ALKAL1Q6UXT8 129 aa28.04■■■□□ 2.08
SHOX2-204ENST00000483851 TSEN34Q9BSV6 310 aaKnown RBP28.04■■■□□ 2.08
SHOX2-204ENST00000483851 DPP3Q9NY33 737 aa28.04■■■□□ 2.08
SHOX2-204ENST00000483851 SNTG2Q9NY99 539 aa28.04■■■□□ 2.08
SHOX2-204ENST00000483851 CNTN3Q9P232 1028 aa28.04■■■□□ 2.08
SHOX2-204ENST00000483851 RNF14Q9UBS8 474 aa28.04■■■□□ 2.08
SHOX2-204ENST00000483851 CDY2AQ9Y6F7 541 aa28.04■■■□□ 2.08
SHOX2-204ENST00000483851 CTAGE15A4D2H0 777 aa28.04■■■□□ 2.08
SHOX2-204ENST00000483851 MOXD2PA6NHM9 499 aa28.04■■■□□ 2.08
SHOX2-204ENST00000483851 MTA2O94776 668 aa28.04■■■□□ 2.08
SHOX2-204ENST00000483851 CTAGE8P0CG41 777 aa28.04■■■□□ 2.08
SHOX2-204ENST00000483851 UNGP13051 313 aaPredicted RBP28.04■■■□□ 2.08
SHOX2-204ENST00000483851 ABCB4P21439 1286 aa28.04■■■□□ 2.08
SHOX2-204ENST00000483851 CTAGE6Q86UF2 777 aa28.04■■■□□ 2.08
SHOX2-204ENST00000483851 CTAGE4Q8IX94 777 aa28.04■■■□□ 2.08
SHOX2-204ENST00000483851 TTC39CQ8N584 583 aa28.04■■■□□ 2.08
SHOX2-204ENST00000483851 TRIM11Q96F44 468 aa28.04■■■□□ 2.08
SHOX2-204ENST00000483851 KIF12Q96FN5 646 aa28.04■■■□□ 2.08
SHOX2-204ENST00000483851 CYP1A1P04798 512 aaPredicted RBP28.03■■■□□ 2.08
SHOX2-204ENST00000483851 ZBTB6Q15916 424 aa28.03■■■□□ 2.08
SHOX2-204ENST00000483851 SCARA3Q6AZY7 606 aa28.03■■■□□ 2.08
SHOX2-204ENST00000483851 DNAAF5Q86Y56 855 aa28.03■■■□□ 2.08
SHOX2-204ENST00000483851 CHST12Q9NRB3 414 aa28.03■■■□□ 2.08
SHOX2-204ENST00000483851 GTF3C4Q9UKN8 822 aa28.03■■■□□ 2.08
SHOX2-204ENST00000483851 BRD3Q15059 726 aa28.02■■■□□ 2.08
SHOX2-204ENST00000483851 XKR4Q5GH76 650 aa28.02■■■□□ 2.08
SHOX2-204ENST00000483851 UBXN11Q5T124 520 aa28.02■■■□□ 2.08
SHOX2-204ENST00000483851 FAM228AQ86W67 206 aa28.02■■■□□ 2.08
SHOX2-204ENST00000483851 OSBPL9Q96SU4 736 aa28.02■■■□□ 2.08
SHOX2-204ENST00000483851 SENP6Q9GZR1 1112 aaPredicted RBP28.02■■■□□ 2.08
SHOX2-204ENST00000483851 CCDC151A5D8V7 595 aa28.02■■■□□ 2.08
SHOX2-204ENST00000483851 CES2O00748 559 aa28.02■■■□□ 2.08
SHOX2-204ENST00000483851 MYBL1P10243 752 aa28.02■■■□□ 2.08
SHOX2-204ENST00000483851 WDR72Q3MJ13 1102 aa28.02■■■□□ 2.08
SHOX2-204ENST00000483851 NOC2LQ9Y3T9 749 aaKnown RBP28.02■■■□□ 2.08
SHOX2-204ENST00000483851 GRIN2DO15399 1336 aa28.01■■■□□ 2.07
SHOX2-204ENST00000483851 CYP1A2P05177 515 aa28.01■■■□□ 2.07
SHOX2-204ENST00000483851 ACLYP53396 1101 aa28.01■■■□□ 2.07
SHOX2-204ENST00000483851 CENPCQ03188 943 aa28.01■■■□□ 2.07
SHOX2-204ENST00000483851 MGAT3Q09327 533 aa28.01■■■□□ 2.07
SHOX2-204ENST00000483851 BEST2Q8NFU1 509 aa28.01■■■□□ 2.07
SHOX2-204ENST00000483851 ARHGEF26Q96DR7 871 aa28.01■■■□□ 2.07
SHOX2-204ENST00000483851 HPDLQ96IR7 371 aa28.01■■■□□ 2.07
SHOX2-204ENST00000483851 HMX1Q9NP08 348 aaPredicted RBP28.01■■■□□ 2.07
SHOX2-204ENST00000483851 UVRAGQ9P2Y5 699 aa28.01■■■□□ 2.07
SHOX2-204ENST00000483851 XPOTO43592 962 aaKnown RBP28■■■□□ 2.07
SHOX2-204ENST00000483851 RECQL4O94761 1208 aa28■■■□□ 2.07
SHOX2-204ENST00000483851 SEC31AO94979 1220 aaKnown RBP28■■■□□ 2.07
SHOX2-204ENST00000483851 POLR2BP30876 1174 aaKnown RBP28■■■□□ 2.07
SHOX2-204ENST00000483851 PTK7Q13308 1070 aa28■■■□□ 2.07
SHOX2-204ENST00000483851 PTGISQ16647 500 aa28■■■□□ 2.07
SHOX2-204ENST00000483851 ZNF296Q8WUU4 475 aaPredicted RBP28■■■□□ 2.07
SHOX2-204ENST00000483851 HNRNPLLQ8WVV9 542 aaKnown RBP28■■■□□ 2.07
SHOX2-204ENST00000483851 VCPIP1Q96JH7 1222 aa28■■■□□ 2.07
SHOX2-204ENST00000483851 NXF3Q9H4D5 531 aaKnown RBP28■■■□□ 2.07
SHOX2-204ENST00000483851 UBQLN1Q9UMX0 589 aaKnown RBP28■■■□□ 2.07
SHOX2-204ENST00000483851 AGAP1Q9UPQ3 857 aa28■■■□□ 2.07
SHOX2-204ENST00000483851 RPS6KA5O75582 802 aa28■■■□□ 2.07
SHOX2-204ENST00000483851 INHAP05111 366 aa28■■■□□ 2.07
SHOX2-204ENST00000483851 ITIH3Q06033 890 aa28■■■□□ 2.07
SHOX2-204ENST00000483851 MYO1EQ12965 1108 aa28■■■□□ 2.07
SHOX2-204ENST00000483851 ITGA7Q13683 1181 aa28■■■□□ 2.07
SHOX2-204ENST00000483851 ZNF572Q7Z3I7 529 aaPredicted RBP28■■■□□ 2.07
SHOX2-204ENST00000483851 ZNF606Q8WXB4 792 aa28■■■□□ 2.07
SHOX2-204ENST00000483851 ABCB6Q9NP58 842 aa28■■■□□ 2.07
SHOX2-204ENST00000483851 AVENQ9NQS1 362 aaPredicted RBP28■■■□□ 2.07
SHOX2-204ENST00000483851 NXF1Q9UBU9 619 aaKnown RBP28■■■□□ 2.07
SHOX2-204ENST00000483851 PDCD11Q14690 1871 aaKnown RBP27.99■■■□□ 2.07
SHOX2-204ENST00000483851 THAP12O43422 761 aa27.99■■■□□ 2.07
SHOX2-204ENST00000483851 CAND2O75155 1236 aa27.99■■■□□ 2.07
SHOX2-204ENST00000483851 PAEPP09466 180 aa27.99■■■□□ 2.07
SHOX2-204ENST00000483851 KCNE1P15382 129 aa27.99■■■□□ 2.07
SHOX2-204ENST00000483851 LRRC52Q8N7C0 313 aa27.99■■■□□ 2.07
SHOX2-204ENST00000483851 PNKPQ96T60 521 aa27.99■■■□□ 2.07
SHOX2-204ENST00000483851 OSGEPQ9NPF4 335 aa27.99■■■□□ 2.07
SHOX2-204ENST00000483851 GPR182O15218 404 aa27.98■■■□□ 2.07
SHOX2-204ENST00000483851 SRGAP2O75044 1071 aa27.98■■■□□ 2.07
SHOX2-204ENST00000483851 LSM8O95777 96 aaKnown RBP27.98■■■□□ 2.07
SHOX2-204ENST00000483851 FTCDO95954 541 aa27.98■■■□□ 2.07
SHOX2-204ENST00000483851 CD4P01730 458 aa27.98■■■□□ 2.07
SHOX2-204ENST00000483851 CHRNA1P02708 482 aa27.98■■■□□ 2.07
SHOX2-204ENST00000483851 GRK4P32298 578 aa27.98■■■□□ 2.07
SHOX2-204ENST00000483851 PLA2G4AP47712 749 aa27.98■■■□□ 2.07
SHOX2-204ENST00000483851 RPS6KA1Q15418 735 aa27.98■■■□□ 2.07
SHOX2-204ENST00000483851 C11orf63Q6NUN7 778 aa27.98■■■□□ 2.07
SHOX2-204ENST00000483851 PEX26Q7Z412 305 aa27.98■■■□□ 2.07
SHOX2-204ENST00000483851 DAAM2Q86T65 1068 aa27.98■■■□□ 2.07
SHOX2-204ENST00000483851 CREG2Q8IUH2 290 aa27.98■■■□□ 2.07
SHOX2-204ENST00000483851 NOA1Q8NC60 698 aaKnown RBP27.98■■■□□ 2.07
SHOX2-204ENST00000483851 GLT1D1Q96MS3 346 aa27.98■■■□□ 2.07
SHOX2-204ENST00000483851 ARFGAP3Q9NP61 516 aa27.98■■■□□ 2.07
SHOX2-204ENST00000483851 CTTNBP2NLQ9P2B4 639 aa27.98■■■□□ 2.07
SHOX2-204ENST00000483851 TRIP11Q15643 1979 aa27.98■■■□□ 2.07
SHOX2-204ENST00000483851 MYCNP04198 464 aaPredicted RBP27.98■■■□□ 2.07
SHOX2-204ENST00000483851 WEE2P0C1S8 567 aa27.98■■■□□ 2.07
SHOX2-204ENST00000483851 CD58P19256 250 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms