RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 TCEAL3Q969E4 200 aa11.94□□□□□ -0.5
SMARCC1-205ENST00000483847 MSANTD3Q96H12 275 aa11.94□□□□□ -0.5
SMARCC1-205ENST00000483847 LRRC3Q9BY71 257 aa11.94□□□□□ -0.5
SMARCC1-205ENST00000483847 C8orf33Q9H7E9 229 aaPredicted RBP11.94□□□□□ -0.5
SMARCC1-205ENST00000483847 ZSWIM6Q9HCJ5 1215 aa11.94□□□□□ -0.5
SMARCC1-205ENST00000483847 H7C4K7 107 aa11.93□□□□□ -0.5
SMARCC1-205ENST00000483847 GIPC1O14908 333 aa11.93□□□□□ -0.5
SMARCC1-205ENST00000483847 SYN3O14994 580 aa11.93□□□□□ -0.5
SMARCC1-205ENST00000483847 MEFVO15553 781 aaPredicted RBP11.93□□□□□ -0.5
SMARCC1-205ENST00000483847 MED24O75448 989 aa11.93□□□□□ -0.5
SMARCC1-205ENST00000483847 RPP40O75818 363 aaKnown RBP11.93□□□□□ -0.5
SMARCC1-205ENST00000483847 SPINK2P20155 84 aa11.93□□□□□ -0.5
SMARCC1-205ENST00000483847 NAMPTP43490 491 aa11.93□□□□□ -0.5
SMARCC1-205ENST00000483847 TNK2Q07912 1038 aa11.93□□□□□ -0.5
SMARCC1-205ENST00000483847 XKR4Q5GH76 650 aa11.93□□□□□ -0.5
SMARCC1-205ENST00000483847 ATF7IP2Q5U623 682 aa11.93□□□□□ -0.5
SMARCC1-205ENST00000483847 C1orf228Q6PIY5 440 aa11.93□□□□□ -0.5
SMARCC1-205ENST00000483847 CPLX2Q6PUV4 134 aaKnown RBP11.93□□□□□ -0.5
SMARCC1-205ENST00000483847 PADI6Q6TGC4 694 aa11.93□□□□□ -0.5
SMARCC1-205ENST00000483847 ALKAL1Q6UXT8 129 aa11.93□□□□□ -0.5
SMARCC1-205ENST00000483847 CACNA2D4Q7Z3S7 1137 aa11.93□□□□□ -0.5
SMARCC1-205ENST00000483847 RALGPS2Q86X27 583 aaPredicted RBP11.93□□□□□ -0.5
SMARCC1-205ENST00000483847 CATSPER3Q86XQ3 398 aa11.93□□□□□ -0.5
SMARCC1-205ENST00000483847 TMC8Q8IU68 726 aa11.93□□□□□ -0.5
SMARCC1-205ENST00000483847 ARID3BQ8IVW6 561 aaPredicted RBP11.93□□□□□ -0.5
SMARCC1-205ENST00000483847 TMEM130Q8N3G9 435 aa11.93□□□□□ -0.5
SMARCC1-205ENST00000483847 LEMD2Q8NC56 503 aa11.93□□□□□ -0.5
SMARCC1-205ENST00000483847 E2F7Q96AV8 911 aa11.93□□□□□ -0.5
SMARCC1-205ENST00000483847 C18orf25Q96B23 403 aaPredicted RBP11.93□□□□□ -0.5
SMARCC1-205ENST00000483847 LOXL4Q96JB6 756 aa11.93□□□□□ -0.5
SMARCC1-205ENST00000483847 MTMR9Q96QG7 549 aa11.93□□□□□ -0.5
SMARCC1-205ENST00000483847 MKNK1Q9BUB5 465 aa11.93□□□□□ -0.5
SMARCC1-205ENST00000483847 CRISPLD1Q9H336 500 aa11.93□□□□□ -0.5
SMARCC1-205ENST00000483847 POLR3BQ9NW08 1133 aaPredicted RBP11.93□□□□□ -0.5
SMARCC1-205ENST00000483847 AFF4Q9UHB7 1163 aaKnown RBP11.93□□□□□ -0.5
SMARCC1-205ENST00000483847 YIPF1Q9Y548 306 aa11.93□□□□□ -0.5
SMARCC1-205ENST00000483847 TOP3BO95985 862 aaKnown RBP11.92□□□□□ -0.5
SMARCC1-205ENST00000483847 CPB1P15086 417 aa11.92□□□□□ -0.5
SMARCC1-205ENST00000483847 CYP11B2P19099 503 aa11.92□□□□□ -0.5
SMARCC1-205ENST00000483847 MPLP40238 635 aa11.92□□□□□ -0.5
SMARCC1-205ENST00000483847 GRM5P41594 1212 aa11.92□□□□□ -0.5
SMARCC1-205ENST00000483847 SCRN1Q12765 414 aa11.92□□□□□ -0.5
SMARCC1-205ENST00000483847 ZNF280DQ6N043 979 aa11.92□□□□□ -0.5
SMARCC1-205ENST00000483847 FAM200AQ8TCP9 573 aa11.92□□□□□ -0.5
SMARCC1-205ENST00000483847 SUSD3Q96L08 255 aa11.92□□□□□ -0.5
SMARCC1-205ENST00000483847 TMEM121BQ9BXQ6 578 aaPredicted RBP11.92□□□□□ -0.5
SMARCC1-205ENST00000483847 GPR88Q9GZN0 384 aa11.92□□□□□ -0.5
SMARCC1-205ENST00000483847 DNAJC25Q9H1X3 360 aa11.92□□□□□ -0.5
SMARCC1-205ENST00000483847 CDT1Q9H211 546 aa11.92□□□□□ -0.5
SMARCC1-205ENST00000483847 WASF3Q9UPY6 502 aa11.92□□□□□ -0.5
SMARCC1-205ENST00000483847 NUB1Q9Y5A7 615 aa11.92□□□□□ -0.5
SMARCC1-205ENST00000483847 DMXL2Q8TDJ6 3036 aa11.92□□□□□ -0.5
SMARCC1-205ENST00000483847 NUP210Q8TEM1 1887 aaPredicted RBP11.91□□□□□ -0.5
SMARCC1-205ENST00000483847 STK36Q9NRP7 1315 aa11.91□□□□□ -0.5
SMARCC1-205ENST00000483847 NEMFO60524 1076 aa11.91□□□□□ -0.5
SMARCC1-205ENST00000483847 OR4Q2P0C623 313 aa11.91□□□□□ -0.5
SMARCC1-205ENST00000483847 CCDC192P0DO97 292 aa11.91□□□□□ -0.5
SMARCC1-205ENST00000483847 XBP1P17861 261 aa11.91□□□□□ -0.5
SMARCC1-205ENST00000483847 NOVA1P51513 510 aaKnown RBP11.91□□□□□ -0.5
SMARCC1-205ENST00000483847 YARSP54577 528 aaKnown RBP11.91□□□□□ -0.5
SMARCC1-205ENST00000483847 CACNB1Q02641 598 aaPredicted RBP11.91□□□□□ -0.5
SMARCC1-205ENST00000483847 FOXC1Q12948 553 aa11.91□□□□□ -0.5
SMARCC1-205ENST00000483847 ACAP1Q15027 740 aa11.91□□□□□ -0.5
SMARCC1-205ENST00000483847 RNF43Q68DV7 783 aa11.91□□□□□ -0.5
SMARCC1-205ENST00000483847 KDF1Q8NAX2 398 aaPredicted RBP11.91□□□□□ -0.5
SMARCC1-205ENST00000483847 DDX12PQ92771 950 aa11.91□□□□□ -0.5
SMARCC1-205ENST00000483847 TBC1D32Q96NH3 1257 aa11.91□□□□□ -0.5
SMARCC1-205ENST00000483847 PGLYRP2Q96PD5 576 aa11.91□□□□□ -0.5
SMARCC1-205ENST00000483847 TMEM60Q9H2L4 133 aa11.91□□□□□ -0.5
SMARCC1-205ENST00000483847 TUFT1Q9NNX1 390 aa11.91□□□□□ -0.5
SMARCC1-205ENST00000483847 SLC38A7Q9NVC3 462 aa11.91□□□□□ -0.5
SMARCC1-205ENST00000483847 TNFSF13BQ9Y275 285 aa11.91□□□□□ -0.5
SMARCC1-205ENST00000483847 CYP46A1Q9Y6A2 500 aa11.91□□□□□ -0.5
SMARCC1-205ENST00000483847 CTDNEP1O95476 244 aa11.9□□□□□ -0.5
SMARCC1-205ENST00000483847 PRAMEF12O95522 483 aa11.9□□□□□ -0.5
SMARCC1-205ENST00000483847 KCNE1P15382 129 aa11.9□□□□□ -0.5
SMARCC1-205ENST00000483847 MCM4P33991 863 aa11.9□□□□□ -0.5
SMARCC1-205ENST00000483847 KRT2P35908 639 aa11.9□□□□□ -0.5
SMARCC1-205ENST00000483847 EFNA5P52803 228 aa11.9□□□□□ -0.5
SMARCC1-205ENST00000483847 ZNF252P-AS1Q0IIN9 211 aa11.9□□□□□ -0.5
SMARCC1-205ENST00000483847 ZNF568Q3ZCX4 644 aa11.9□□□□□ -0.5
SMARCC1-205ENST00000483847 ARHGAP29Q52LW3 1261 aa11.9□□□□□ -0.5
SMARCC1-205ENST00000483847 GAREM2Q75VX8 874 aa11.9□□□□□ -0.5
SMARCC1-205ENST00000483847 SYNPOQ8N3V7 929 aa11.9□□□□□ -0.5
SMARCC1-205ENST00000483847 BEST2Q8NFU1 509 aa11.9□□□□□ -0.5
SMARCC1-205ENST00000483847 CHFRQ96EP1 664 aa11.9□□□□□ -0.5
SMARCC1-205ENST00000483847 ZC3H10Q96K80 434 aaKnown RBP11.9□□□□□ -0.5
SMARCC1-205ENST00000483847 NACC1Q96RE7 527 aa11.9□□□□□ -0.5
SMARCC1-205ENST00000483847 EDEM2Q9BV94 578 aa11.9□□□□□ -0.5
SMARCC1-205ENST00000483847 CCDC94Q9BW85 323 aaPredicted RBP11.9□□□□□ -0.5
SMARCC1-205ENST00000483847 PTPRHQ9HD43 1115 aa11.9□□□□□ -0.5
SMARCC1-205ENST00000483847 VPS45Q9NRW7 570 aa11.9□□□□□ -0.5
SMARCC1-205ENST00000483847 TOPORSQ9NS56 1045 aaPredicted RBP11.9□□□□□ -0.5
SMARCC1-205ENST00000483847 MAFFQ9ULX9 164 aa11.9□□□□□ -0.5
SMARCC1-205ENST00000483847 PCDHGA5Q9Y5G8 931 aa11.9□□□□□ -0.5
SMARCC1-205ENST00000483847 TIMM13Q9Y5L4 95 aaPredicted RBP11.9□□□□□ -0.5
SMARCC1-205ENST00000483847 SETXQ7Z333 2677 aaKnown RBP11.9□□□□□ -0.5
SMARCC1-205ENST00000483847 GCN1Q92616 2671 aaKnown RBP11.9□□□□□ -0.5
SMARCC1-205ENST00000483847 ATG2BQ96BY7 2078 aa11.9□□□□□ -0.51
SMARCC1-205ENST00000483847 CITO14578 2027 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms