RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 CGRRF1Q99675 332 aa17.91■□□□□ 0.46
HMGN1-214ENST00000482733 CLSTN3Q9BQT9 956 aa17.91■□□□□ 0.46
HMGN1-214ENST00000482733 MTMR12Q9C0I1 747 aa17.91■□□□□ 0.46
HMGN1-214ENST00000482733 DSEQ9UL01 958 aa17.91■□□□□ 0.46
HMGN1-214ENST00000482733 UNC80Q8N2C7 3258 aa17.9■□□□□ 0.46
HMGN1-214ENST00000482733 PSMA7O14818 248 aa17.9■□□□□ 0.46
HMGN1-214ENST00000482733 PPEF2O14830 753 aa17.9■□□□□ 0.46
HMGN1-214ENST00000482733 ITGB3P05106 788 aa17.9■□□□□ 0.46
HMGN1-214ENST00000482733 RPL17P18621 184 aaKnown RBP17.9■□□□□ 0.46
HMGN1-214ENST00000482733 POLR2BP30876 1174 aaKnown RBP17.9■□□□□ 0.46
HMGN1-214ENST00000482733 ADAM9Q13443 819 aa17.9■□□□□ 0.46
HMGN1-214ENST00000482733 MORC3Q14149 939 aa17.9■□□□□ 0.46
HMGN1-214ENST00000482733 CEP135Q66GS9 1140 aa17.9■□□□□ 0.46
HMGN1-214ENST00000482733 CENPPQ6IPU0 288 aa17.9■□□□□ 0.46
HMGN1-214ENST00000482733 ZNF280DQ6N043 979 aa17.9■□□□□ 0.46
HMGN1-214ENST00000482733 TMEM130Q8N3G9 435 aa17.9■□□□□ 0.46
HMGN1-214ENST00000482733 SMRP1Q8NCR6 262 aa17.9■□□□□ 0.46
HMGN1-214ENST00000482733 DHTKD1Q96HY7 919 aaPredicted RBP17.9■□□□□ 0.46
HMGN1-214ENST00000482733 SENP8Q96LD8 212 aa17.9■□□□□ 0.46
HMGN1-214ENST00000482733 PLEKHA4Q9H4M7 779 aa17.9■□□□□ 0.46
HMGN1-214ENST00000482733 KIAA1468Q9P260 1216 aa17.9■□□□□ 0.46
HMGN1-214ENST00000482733 AGAP1Q9UPQ3 857 aa17.9■□□□□ 0.46
HMGN1-214ENST00000482733 TRIP11Q15643 1979 aa17.9■□□□□ 0.46
HMGN1-214ENST00000482733 PDCD11Q14690 1871 aaKnown RBP17.89■□□□□ 0.45
HMGN1-214ENST00000482733 GRXCR2A6NFK2 248 aa17.89■□□□□ 0.45
HMGN1-214ENST00000482733 KPNA7A9QM74 516 aa17.89■□□□□ 0.45
HMGN1-214ENST00000482733 CETN3O15182 167 aa17.89■□□□□ 0.45
HMGN1-214ENST00000482733 SPTLC1O15269 473 aa17.89■□□□□ 0.45
HMGN1-214ENST00000482733 TGM5O43548 720 aa17.89■□□□□ 0.45
HMGN1-214ENST00000482733 OAZ2O95190 189 aa17.89■□□□□ 0.45
HMGN1-214ENST00000482733 KRT19P08727 400 aa17.89■□□□□ 0.45
HMGN1-214ENST00000482733 BMP1P13497 986 aa17.89■□□□□ 0.45
HMGN1-214ENST00000482733 PSMC2P35998 433 aaKnown RBP17.89■□□□□ 0.45
HMGN1-214ENST00000482733 KCNQ1P51787 676 aa17.89■□□□□ 0.45
HMGN1-214ENST00000482733 YWHAHQ04917 246 aaPredicted RBP17.89■□□□□ 0.45
HMGN1-214ENST00000482733 LRRC63Q05C16 580 aa17.89■□□□□ 0.45
HMGN1-214ENST00000482733 ITIH3Q06033 890 aa17.89■□□□□ 0.45
HMGN1-214ENST00000482733 ENPEPQ07075 957 aa17.89■□□□□ 0.45
HMGN1-214ENST00000482733 RAB33AQ14088 237 aa17.89■□□□□ 0.45
HMGN1-214ENST00000482733 CLUL1Q15846 466 aa17.89■□□□□ 0.45
HMGN1-214ENST00000482733 CAMK4Q16566 473 aa17.89■□□□□ 0.45
HMGN1-214ENST00000482733 LMBRD2Q68DH5 695 aaPredicted RBP17.89■□□□□ 0.45
HMGN1-214ENST00000482733 SLC8B1Q6J4K2 584 aa17.89■□□□□ 0.45
HMGN1-214ENST00000482733 LILRA6Q6PI73 481 aa17.89■□□□□ 0.45
HMGN1-214ENST00000482733 SYCE2Q6PIF2 218 aa17.89■□□□□ 0.45
HMGN1-214ENST00000482733 PALB2Q86YC2 1186 aa17.89■□□□□ 0.45
HMGN1-214ENST00000482733 OR5B17Q8NGF7 314 aa17.89■□□□□ 0.45
HMGN1-214ENST00000482733 TMC2Q8TDI7 906 aa17.89■□□□□ 0.45
HMGN1-214ENST00000482733 PARD3BQ8TEW8 1205 aa17.89■□□□□ 0.45
HMGN1-214ENST00000482733 CLSTN2Q9H4D0 955 aa17.89■□□□□ 0.45
HMGN1-214ENST00000482733 SFXN1Q9H9B4 322 aa17.89■□□□□ 0.45
HMGN1-214ENST00000482733 CDY1Q9Y6F8 540 aa17.89■□□□□ 0.45
HMGN1-214ENST00000482733 SPDYE4A6NLX3 237 aa17.88■□□□□ 0.45
HMGN1-214ENST00000482733 MBTPS2O43462 519 aa17.88■□□□□ 0.45
HMGN1-214ENST00000482733 TBC1D4O60343 1298 aa17.88■□□□□ 0.45
HMGN1-214ENST00000482733 CYP11A1P05108 521 aa17.88■□□□□ 0.45
HMGN1-214ENST00000482733 OR1D2P34982 312 aa17.88■□□□□ 0.45
HMGN1-214ENST00000482733 CASP4P49662 377 aa17.88■□□□□ 0.45
HMGN1-214ENST00000482733 CLDN10P78369 228 aa17.88■□□□□ 0.45
HMGN1-214ENST00000482733 MYO1EQ12965 1108 aa17.88■□□□□ 0.45
HMGN1-214ENST00000482733 CTXN3Q4LDR2 81 aa17.88■□□□□ 0.45
HMGN1-214ENST00000482733 ISM2Q6H9L7 571 aa17.88■□□□□ 0.45
HMGN1-214ENST00000482733 CES5AQ6NT32 575 aa17.88■□□□□ 0.45
HMGN1-214ENST00000482733 INTS8Q75QN2 995 aaKnown RBP17.88■□□□□ 0.45
HMGN1-214ENST00000482733 TRAPPC11Q7Z392 1133 aa17.88■□□□□ 0.45
HMGN1-214ENST00000482733 METTL23Q86XA0 190 aa17.88■□□□□ 0.45
HMGN1-214ENST00000482733 GLYCTKQ8IVS8 523 aa17.88■□□□□ 0.45
HMGN1-214ENST00000482733 CXorf38Q8TB03 319 aa17.88■□□□□ 0.45
HMGN1-214ENST00000482733 BORCS6Q96GS4 357 aa17.88■□□□□ 0.45
HMGN1-214ENST00000482733 MKNK1Q9BUB5 465 aa17.88■□□□□ 0.45
HMGN1-214ENST00000482733 S1PR5Q9H228 398 aa17.88■□□□□ 0.45
HMGN1-214ENST00000482733 ADAM7Q9H2U9 754 aa17.88■□□□□ 0.45
HMGN1-214ENST00000482733 MAN1C1Q9NR34 630 aa17.88■□□□□ 0.45
HMGN1-214ENST00000482733 SIX4Q9UIU6 781 aa17.88■□□□□ 0.45
HMGN1-214ENST00000482733 PTPRJQ12913 1337 aa17.88■□□□□ 0.45
HMGN1-214ENST00000482733 OR6C75A6NL08 312 aa17.87■□□□□ 0.45
HMGN1-214ENST00000482733 CYB561D2O14569 222 aa17.87■□□□□ 0.45
HMGN1-214ENST00000482733 IKBKBO14920 756 aa17.87■□□□□ 0.45
HMGN1-214ENST00000482733 AKAP3O75969 853 aa17.87■□□□□ 0.45
HMGN1-214ENST00000482733 KRT13P13646 458 aa17.87■□□□□ 0.45
HMGN1-214ENST00000482733 CCNE1P24864 410 aa17.87■□□□□ 0.45
HMGN1-214ENST00000482733 FKBP3Q00688 224 aaKnown RBP17.87■□□□□ 0.45
HMGN1-214ENST00000482733 SMAD2Q15796 467 aaKnown RBP17.87■□□□□ 0.45
HMGN1-214ENST00000482733 OVOS1Q6IE37 1185 aa17.87■□□□□ 0.45
HMGN1-214ENST00000482733 FOXR2Q6PJQ5 311 aa17.87■□□□□ 0.45
HMGN1-214ENST00000482733 CYP26C1Q6V0L0 522 aa17.87■□□□□ 0.45
HMGN1-214ENST00000482733 RTL10Q7L3V2 364 aa17.87■□□□□ 0.45
HMGN1-214ENST00000482733 FAM186BQ8IYM0 893 aa17.87■□□□□ 0.45
HMGN1-214ENST00000482733 KREMEN2Q8NCW0 462 aa17.87■□□□□ 0.45
HMGN1-214ENST00000482733 CMASQ8NFW8 434 aaPredicted RBP17.87■□□□□ 0.45
HMGN1-214ENST00000482733 POP1Q99575 1024 aaKnown RBP17.87■□□□□ 0.45
HMGN1-214ENST00000482733 GZF1Q9H116 711 aaPredicted RBP17.87■□□□□ 0.45
HMGN1-214ENST00000482733 NUP62CLQ9H1M0 184 aa17.87■□□□□ 0.45
HMGN1-214ENST00000482733 FBXL5Q9UKA1 691 aa17.87■□□□□ 0.45
HMGN1-214ENST00000482733 BICDL2A1A5D9 508 aa17.86■□□□□ 0.45
HMGN1-214ENST00000482733 LRRIQ3A6PVS8 624 aaPredicted RBP17.86■□□□□ 0.45
HMGN1-214ENST00000482733 BIN1O00499 593 aa17.86■□□□□ 0.45
HMGN1-214ENST00000482733 ADAM12O43184 909 aa17.86■□□□□ 0.45
HMGN1-214ENST00000482733 EPB41P11171 864 aaKnown RBP17.86■□□□□ 0.45
HMGN1-214ENST00000482733 BMP6P22004 513 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms