RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 TRIML1Q8N9V2 468 aa22.57■■□□□ 1.2
SEC13-217ENST00000482647 OR5B17Q8NGF7 314 aa22.57■■□□□ 1.2
SEC13-217ENST00000482647 MSLNLQ96KJ4 702 aa22.57■■□□□ 1.2
SEC13-217ENST00000482647 ZNF560Q96MR9 790 aa22.57■■□□□ 1.2
SEC13-217ENST00000482647 POP1Q99575 1024 aaKnown RBP22.57■■□□□ 1.2
SEC13-217ENST00000482647 CGRRF1Q99675 332 aa22.57■■□□□ 1.2
SEC13-217ENST00000482647 CLSTN3Q9BQT9 956 aa22.57■■□□□ 1.2
SEC13-217ENST00000482647 DZANK1Q9NVP4 752 aa22.57■■□□□ 1.2
SEC13-217ENST00000482647 MTRRQ9UBK8 725 aa22.57■■□□□ 1.2
SEC13-217ENST00000482647 DPP7Q9UHL4 492 aa22.57■■□□□ 1.2
SEC13-217ENST00000482647 PTPRJQ12913 1337 aa22.57■■□□□ 1.2
SEC13-217ENST00000482647 MAPK13O15264 365 aa22.56■■□□□ 1.2
SEC13-217ENST00000482647 SPTLC1O15269 473 aa22.56■■□□□ 1.2
SEC13-217ENST00000482647 GLUD1P00367 558 aa22.56■■□□□ 1.2
SEC13-217ENST00000482647 KRT19P08727 400 aa22.56■■□□□ 1.2
SEC13-217ENST00000482647 CASP4P49662 377 aa22.56■■□□□ 1.2
SEC13-217ENST00000482647 SV2CQ496J9 727 aa22.56■■□□□ 1.2
SEC13-217ENST00000482647 USP37Q86T82 979 aa22.56■■□□□ 1.2
SEC13-217ENST00000482647 LRRC52Q8N7C0 313 aa22.56■■□□□ 1.2
SEC13-217ENST00000482647 BRWD1Q9NSI6 2320 aa22.56■■□□□ 1.2
SEC13-217ENST00000482647 ATG2AQ2TAZ0 1938 aa22.55■■□□□ 1.2
SEC13-217ENST00000482647 CETN3O15182 167 aa22.55■■□□□ 1.2
SEC13-217ENST00000482647 AKAP3O75969 853 aa22.55■■□□□ 1.2
SEC13-217ENST00000482647 ODC1P11926 461 aa22.55■■□□□ 1.2
SEC13-217ENST00000482647 BMP6P22004 513 aa22.55■■□□□ 1.2
SEC13-217ENST00000482647 PSMC2P35998 433 aaKnown RBP22.55■■□□□ 1.2
SEC13-217ENST00000482647 AP3M2P53677 418 aa22.55■■□□□ 1.2
SEC13-217ENST00000482647 LRRC63Q05C16 580 aa22.55■■□□□ 1.2
SEC13-217ENST00000482647 MRPL58Q14197 206 aaKnown RBP22.55■■□□□ 1.2
SEC13-217ENST00000482647 CLUL1Q15846 466 aa22.55■■□□□ 1.2
SEC13-217ENST00000482647 ANKRD40Q6AI12 368 aa22.55■■□□□ 1.2
SEC13-217ENST00000482647 PTCRAQ6ISU1 281 aaPredicted RBP22.55■■□□□ 1.2
SEC13-217ENST00000482647 TRAPPC11Q7Z392 1133 aa22.55■■□□□ 1.2
SEC13-217ENST00000482647 GLYCTKQ8IVS8 523 aa22.55■■□□□ 1.2
SEC13-217ENST00000482647 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.55■■□□□ 1.2
SEC13-217ENST00000482647 CXorf38Q8TB03 319 aa22.55■■□□□ 1.2
SEC13-217ENST00000482647 PARD3BQ8TEW8 1205 aa22.55■■□□□ 1.2
SEC13-217ENST00000482647 FAM84AQ96KN4 292 aa22.55■■□□□ 1.2
SEC13-217ENST00000482647 SENP8Q96LD8 212 aa22.55■■□□□ 1.2
SEC13-217ENST00000482647 NUP62CLQ9H1M0 184 aa22.55■■□□□ 1.2
SEC13-217ENST00000482647 DSEQ9UL01 958 aa22.55■■□□□ 1.2
SEC13-217ENST00000482647 FAM50BQ9Y247 325 aa22.55■■□□□ 1.2
SEC13-217ENST00000482647 KPNA7A9QM74 516 aa22.54■■□□□ 1.2
SEC13-217ENST00000482647 TGM5O43548 720 aa22.54■■□□□ 1.2
SEC13-217ENST00000482647 OAZ2O95190 189 aa22.54■■□□□ 1.2
SEC13-217ENST00000482647 TYMPP19971 482 aa22.54■■□□□ 1.2
SEC13-217ENST00000482647 CCNE1P24864 410 aa22.54■■□□□ 1.2
SEC13-217ENST00000482647 OR1D2P34982 312 aa22.54■■□□□ 1.2
SEC13-217ENST00000482647 KCNQ1P51787 676 aa22.54■■□□□ 1.2
SEC13-217ENST00000482647 CLDN10P78369 228 aa22.54■■□□□ 1.2
SEC13-217ENST00000482647 YWHAHQ04917 246 aaPredicted RBP22.54■■□□□ 1.2
SEC13-217ENST00000482647 MYO1EQ12965 1108 aa22.54■■□□□ 1.2
SEC13-217ENST00000482647 CTXN3Q4LDR2 81 aa22.54■■□□□ 1.2
SEC13-217ENST00000482647 TJAP1Q5JTD0 557 aa22.54■■□□□ 1.2
SEC13-217ENST00000482647 INTS8Q75QN2 995 aaKnown RBP22.54■■□□□ 1.2
SEC13-217ENST00000482647 FAM186BQ8IYM0 893 aa22.54■■□□□ 1.2
SEC13-217ENST00000482647 TMC2Q8TDI7 906 aa22.54■■□□□ 1.2
SEC13-217ENST00000482647 OXCT2Q9BYC2 517 aaPredicted RBP22.54■■□□□ 1.2
SEC13-217ENST00000482647 GZF1Q9H116 711 aaPredicted RBP22.54■■□□□ 1.2
SEC13-217ENST00000482647 SIX4Q9UIU6 781 aa22.54■■□□□ 1.2
SEC13-217ENST00000482647 TIMM13Q9Y5L4 95 aaPredicted RBP22.54■■□□□ 1.2
SEC13-217ENST00000482647 CDY1Q9Y6F8 540 aa22.54■■□□□ 1.2
SEC13-217ENST00000482647 PDCD11Q14690 1871 aaKnown RBP22.54■■□□□ 1.2
SEC13-217ENST00000482647 SPDYE4A6NLX3 237 aa22.53■■□□□ 1.2
SEC13-217ENST00000482647 PPP1R3GB7ZBB8 358 aa22.53■■□□□ 1.2
SEC13-217ENST00000482647 CYB561D2O14569 222 aa22.53■■□□□ 1.2
SEC13-217ENST00000482647 TBC1D4O60343 1298 aa22.53■■□□□ 1.2
SEC13-217ENST00000482647 KRT13P13646 458 aa22.53■■□□□ 1.2
SEC13-217ENST00000482647 CD44P16070 742 aaKnown RBP22.53■■□□□ 1.2
SEC13-217ENST00000482647 FKBP3Q00688 224 aaKnown RBP22.53■■□□□ 1.2
SEC13-217ENST00000482647 SMAD4Q13485 552 aaKnown RBP22.53■■□□□ 1.2
SEC13-217ENST00000482647 RAB33AQ14088 237 aa22.53■■□□□ 1.2
SEC13-217ENST00000482647 ZNF280DQ6N043 979 aa22.53■■□□□ 1.2
SEC13-217ENST00000482647 LILRA6Q6PI73 481 aa22.53■■□□□ 1.2
SEC13-217ENST00000482647 SYCE2Q6PIF2 218 aa22.53■■□□□ 1.2
SEC13-217ENST00000482647 METTL23Q86XA0 190 aa22.53■■□□□ 1.2
SEC13-217ENST00000482647 GPT2Q8TD30 523 aa22.53■■□□□ 1.2
SEC13-217ENST00000482647 PLEKHO2Q8TD55 490 aa22.53■■□□□ 1.2
SEC13-217ENST00000482647 HDAC7Q8WUI4 952 aa22.53■■□□□ 1.2
SEC13-217ENST00000482647 ZNF516Q92618 1163 aa22.53■■□□□ 1.2
SEC13-217ENST00000482647 BORCS6Q96GS4 357 aa22.53■■□□□ 1.2
SEC13-217ENST00000482647 PLEKHA4Q9H4M7 779 aa22.53■■□□□ 1.2
SEC13-217ENST00000482647 FBXL5Q9UKA1 691 aa22.53■■□□□ 1.2
SEC13-217ENST00000482647 GRXCR2A6NFK2 248 aa22.52■■□□□ 1.2
SEC13-217ENST00000482647 LRRIQ3A6PVS8 624 aaPredicted RBP22.52■■□□□ 1.2
SEC13-217ENST00000482647 IKBKBO14920 756 aa22.52■■□□□ 1.2
SEC13-217ENST00000482647 ADAM12O43184 909 aa22.52■■□□□ 1.2
SEC13-217ENST00000482647 PHACTR2O75167 634 aa22.52■■□□□ 1.2
SEC13-217ENST00000482647 SPATA31D3P0C874 917 aa22.52■■□□□ 1.2
SEC13-217ENST00000482647 BMP1P13497 986 aa22.52■■□□□ 1.2
SEC13-217ENST00000482647 VAMP7P51809 220 aa22.52■■□□□ 1.2
SEC13-217ENST00000482647 PMS1P54277 932 aaKnown RBP22.52■■□□□ 1.2
SEC13-217ENST00000482647 ENPEPQ07075 957 aa22.52■■□□□ 1.2
SEC13-217ENST00000482647 BFSP1Q12934 665 aa22.52■■□□□ 1.2
SEC13-217ENST00000482647 OVOS1Q6IE37 1185 aa22.52■■□□□ 1.2
SEC13-217ENST00000482647 SLC8B1Q6J4K2 584 aa22.52■■□□□ 1.2
SEC13-217ENST00000482647 KLHL10Q6JEL2 608 aa22.52■■□□□ 1.2
SEC13-217ENST00000482647 RSPO2Q6UXX9 243 aaPredicted RBP22.52■■□□□ 1.2
SEC13-217ENST00000482647 SPATA31D4Q6ZUB0 917 aa22.52■■□□□ 1.2
SEC13-217ENST00000482647 SMRP1Q8NCR6 262 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms