RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 PACS2Q86VP3 889 aa9.68□□□□□ -0.86
CALD1-220ENST00000482470 FBXO16Q8IX29 292 aaPredicted RBP9.68□□□□□ -0.86
CALD1-220ENST00000482470 FEZF2Q8TBJ5 459 aa9.68□□□□□ -0.86
CALD1-220ENST00000482470 PLEKHO2Q8TD55 490 aa9.68□□□□□ -0.86
CALD1-220ENST00000482470 TMC2Q8TDI7 906 aa9.68□□□□□ -0.86
CALD1-220ENST00000482470 SHC3Q92529 594 aa9.68□□□□□ -0.86
CALD1-220ENST00000482470 ZBTB10Q96DT7 871 aa9.68□□□□□ -0.86
CALD1-220ENST00000482470 CFAP57Q96MR6 1250 aa9.68□□□□□ -0.86
CALD1-220ENST00000482470 PITPNM3Q9BZ71 974 aa9.68□□□□□ -0.86
CALD1-220ENST00000482470 CXorf56Q9H5V9 222 aa9.68□□□□□ -0.86
CALD1-220ENST00000482470 FGFR1OP2Q9NVK5 253 aa9.68□□□□□ -0.86
CALD1-220ENST00000482470 CYP39A1Q9NYL5 469 aa9.68□□□□□ -0.86
CALD1-220ENST00000482470 DDX3YO15523 660 aaKnown RBP9.68□□□□□ -0.86
CALD1-220ENST00000482470 TBC1D12O60347 775 aa9.68□□□□□ -0.86
CALD1-220ENST00000482470 DDNO94850 711 aaPredicted RBP9.68□□□□□ -0.86
CALD1-220ENST00000482470 IRX4P78413 519 aa9.68□□□□□ -0.86
CALD1-220ENST00000482470 CCDC6Q16204 474 aa9.68□□□□□ -0.86
CALD1-220ENST00000482470 AGBL2Q5U5Z8 902 aa9.68□□□□□ -0.86
CALD1-220ENST00000482470 EFCAB12Q6NXP0 572 aa9.68□□□□□ -0.86
CALD1-220ENST00000482470 ZNF449Q6P9G9 518 aa9.68□□□□□ -0.86
CALD1-220ENST00000482470 C1orf228Q6PIY5 440 aa9.68□□□□□ -0.86
CALD1-220ENST00000482470 ARHGEF18Q6ZSZ5 1173 aa9.68□□□□□ -0.86
CALD1-220ENST00000482470 LRRC34Q8IZ02 419 aa9.68□□□□□ -0.86
CALD1-220ENST00000482470 CCDC33Q8N5R6 958 aa9.68□□□□□ -0.86
CALD1-220ENST00000482470 OR6B3Q8NGW1 331 aa9.68□□□□□ -0.86
CALD1-220ENST00000482470 C17orf75Q9HAS0 396 aa9.68□□□□□ -0.86
CALD1-220ENST00000482470 AGAP1Q9UPQ3 857 aa9.68□□□□□ -0.86
CALD1-220ENST00000482470 TELO2Q9Y4R8 837 aa9.68□□□□□ -0.86
CALD1-220ENST00000482470 ZNF536O15090 1300 aa9.68□□□□□ -0.86
CALD1-220ENST00000482470 FOXO6A8MYZ6 492 aa9.68□□□□□ -0.86
CALD1-220ENST00000482470 KIAA0391O15091 583 aaKnown RBP9.68□□□□□ -0.86
CALD1-220ENST00000482470 DHX15O43143 795 aaKnown RBP9.68□□□□□ -0.86
CALD1-220ENST00000482470 ZSCAN5DPP0CG00 497 aa9.68□□□□□ -0.86
CALD1-220ENST00000482470 ITIH2P19823 946 aa9.68□□□□□ -0.86
CALD1-220ENST00000482470 SLC1A1P43005 524 aa9.68□□□□□ -0.86
CALD1-220ENST00000482470 FAM182AQ5T1J6 154 aa9.68□□□□□ -0.86
CALD1-220ENST00000482470 C11orf63Q6NUN7 778 aa9.68□□□□□ -0.86
CALD1-220ENST00000482470 NIPA1Q7RTP0 329 aa9.68□□□□□ -0.86
CALD1-220ENST00000482470 ZNF606Q8WXB4 792 aa9.68□□□□□ -0.86
CALD1-220ENST00000482470 P3H4Q92791 437 aa9.68□□□□□ -0.86
CALD1-220ENST00000482470 TRAIPQ9BWF2 469 aa9.68□□□□□ -0.86
CALD1-220ENST00000482470 YY1AP1Q9H869 796 aa9.68□□□□□ -0.86
CALD1-220ENST00000482470 TXNDC16Q9P2K2 825 aa9.68□□□□□ -0.86
CALD1-220ENST00000482470 SAE1Q9UBE0 346 aaPredicted RBP9.68□□□□□ -0.86
CALD1-220ENST00000482470 CTNNAL1Q9UBT7 734 aa9.68□□□□□ -0.86
CALD1-220ENST00000482470 BTNL10A8MVZ5 291 aa9.67□□□□□ -0.86
CALD1-220ENST00000482470 PRPSAP2O60256 369 aa9.67□□□□□ -0.86
CALD1-220ENST00000482470 MYBL1P10243 752 aa9.67□□□□□ -0.86
CALD1-220ENST00000482470 MAP2K2P36507 400 aa9.67□□□□□ -0.86
CALD1-220ENST00000482470 TNFSF9P41273 254 aa9.67□□□□□ -0.86
CALD1-220ENST00000482470 IFRD2Q12894 506 aaPredicted RBP9.67□□□□□ -0.86
CALD1-220ENST00000482470 NFX1Q12986 1120 aaKnown RBP9.67□□□□□ -0.86
CALD1-220ENST00000482470 BIRC2Q13490 618 aa9.67□□□□□ -0.86
CALD1-220ENST00000482470 DPY19L2Q6NUT2 758 aa9.67□□□□□ -0.86
CALD1-220ENST00000482470 MOB2Q70IA6 237 aa9.67□□□□□ -0.86
CALD1-220ENST00000482470 CENPUQ71F23 418 aa9.67□□□□□ -0.86
CALD1-220ENST00000482470 MSL3Q8N5Y2 521 aaKnown RBP9.67□□□□□ -0.86
CALD1-220ENST00000482470 PAF1Q8N7H5 531 aa9.67□□□□□ -0.86
CALD1-220ENST00000482470 TRPM4Q8TD43 1214 aa9.67□□□□□ -0.86
CALD1-220ENST00000482470 CRYGNQ8WXF5 182 aa9.67□□□□□ -0.86
CALD1-220ENST00000482470 MMP19Q99542 508 aa9.67□□□□□ -0.86
CALD1-220ENST00000482470 HAUS2Q9NVX0 235 aa9.67□□□□□ -0.86
CALD1-220ENST00000482470 NEU2Q9Y3R4 380 aa9.67□□□□□ -0.86
CALD1-220ENST00000482470 PCDHA3Q9Y5H8 950 aa9.67□□□□□ -0.86
CALD1-220ENST00000482470 DDX60Q8IY21 1712 aaKnown RBP9.67□□□□□ -0.86
CALD1-220ENST00000482470 COL16A1Q07092 1604 aaPredicted RBP9.67□□□□□ -0.86
CALD1-220ENST00000482470 MYH1P12882 1939 aa9.67□□□□□ -0.86
CALD1-220ENST00000482470 MED7O43513 233 aa9.67□□□□□ -0.86
CALD1-220ENST00000482470 CST8O60676 142 aa9.67□□□□□ -0.86
CALD1-220ENST00000482470 MAPTP10636 758 aaKnown RBP9.67□□□□□ -0.86
CALD1-220ENST00000482470 GLRA2P23416 452 aa9.67□□□□□ -0.86
CALD1-220ENST00000482470 RPS12P25398 132 aaKnown RBP9.67□□□□□ -0.86
CALD1-220ENST00000482470 MSH2P43246 934 aa9.67□□□□□ -0.86
CALD1-220ENST00000482470 TDRD10Q5VZ19 366 aaKnown RBP9.67□□□□□ -0.86
CALD1-220ENST00000482470 TRIM72Q6ZMU5 477 aa9.67□□□□□ -0.86
CALD1-220ENST00000482470 CEP128Q6ZU80 1094 aa9.67□□□□□ -0.86
CALD1-220ENST00000482470 PDIK1LQ8N165 341 aa9.67□□□□□ -0.86
CALD1-220ENST00000482470 TTC16Q8NEE8 873 aa9.67□□□□□ -0.86
CALD1-220ENST00000482470 COPS5Q92905 334 aa9.67□□□□□ -0.86
CALD1-220ENST00000482470 CFAP36Q96G28 342 aa9.67□□□□□ -0.86
CALD1-220ENST00000482470 TGS1Q96RS0 853 aaKnown RBP9.67□□□□□ -0.86
CALD1-220ENST00000482470 TMEM121Q9BTD3 319 aa9.67□□□□□ -0.86
CALD1-220ENST00000482470 CISHQ9NSE2 258 aa9.67□□□□□ -0.86
CALD1-220ENST00000482470 ATRNL1Q5VV63 1379 aa9.67□□□□□ -0.86
CALD1-220ENST00000482470 F8VP50 259 aa9.67□□□□□ -0.86
CALD1-220ENST00000482470 CES2O00748 559 aa9.67□□□□□ -0.86
CALD1-220ENST00000482470 AGTP01019 485 aa9.67□□□□□ -0.86
CALD1-220ENST00000482470 INHBAP08476 426 aa9.67□□□□□ -0.86
CALD1-220ENST00000482470 PHBP35232 272 aa9.67□□□□□ -0.86
CALD1-220ENST00000482470 PSMC4P43686 418 aa9.67□□□□□ -0.86
CALD1-220ENST00000482470 CDH6P55285 790 aa9.67□□□□□ -0.86
CALD1-220ENST00000482470 SNRPFP62306 86 aaKnown RBP9.67□□□□□ -0.86
CALD1-220ENST00000482470 GJC2Q5T442 439 aaPredicted RBP9.67□□□□□ -0.86
CALD1-220ENST00000482470 ATF7IP2Q5U623 682 aa9.67□□□□□ -0.86
CALD1-220ENST00000482470 FYB2Q5VWT5 728 aa9.67□□□□□ -0.86
CALD1-220ENST00000482470 XRRA1Q6P2D8 792 aa9.67□□□□□ -0.86
CALD1-220ENST00000482470 RDM1Q8NG50 284 aa9.67□□□□□ -0.86
CALD1-220ENST00000482470 SLC10A4Q96EP9 437 aa9.67□□□□□ -0.86
CALD1-220ENST00000482470 FAM167AQ96KS9 214 aa9.67□□□□□ -0.86
CALD1-220ENST00000482470 LBHD1Q9BQE6 289 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms