RNA–Protein interactions for RNA: ENST00000482195.5

DDX39B-220, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 1,232 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-220ENST00000482195 ATXN1P54253 815 aaKnown RBP11.29□□□□□ -0.6
DDX39B-220ENST00000482195 PEX3P56589 373 aa11.29□□□□□ -0.6
DDX39B-220ENST00000482195 ARHGAP8P85298 464 aa11.29□□□□□ -0.6
DDX39B-220ENST00000482195 DMP1Q13316 513 aaPredicted RBP11.29□□□□□ -0.6
DDX39B-220ENST00000482195 CTXN3Q4LDR2 81 aa11.29□□□□□ -0.6
DDX39B-220ENST00000482195 FAM78AQ5JUQ0 283 aa11.29□□□□□ -0.6
DDX39B-220ENST00000482195 PRSS36Q5K4E3 855 aa11.29□□□□□ -0.6
DDX39B-220ENST00000482195 CYP4A22Q5TCH4 519 aa11.29□□□□□ -0.6
DDX39B-220ENST00000482195 IQCEQ6IPM2 695 aa11.29□□□□□ -0.6
DDX39B-220ENST00000482195 ZNF280DQ6N043 979 aa11.29□□□□□ -0.6
DDX39B-220ENST00000482195 CD300LGQ6UXG3 332 aa11.29□□□□□ -0.6
DDX39B-220ENST00000482195 ZBTB44Q8NCP5 570 aa11.29□□□□□ -0.6
DDX39B-220ENST00000482195 ZNF461Q8TAF7 563 aa11.29□□□□□ -0.6
DDX39B-220ENST00000482195 CLDN23Q96B33 292 aa11.29□□□□□ -0.6
DDX39B-220ENST00000482195 BORCS6Q96GS4 357 aa11.29□□□□□ -0.6
DDX39B-220ENST00000482195 TCHPQ9BT92 498 aa11.29□□□□□ -0.6
DDX39B-220ENST00000482195 CDT1Q9H211 546 aa11.29□□□□□ -0.6
DDX39B-220ENST00000482195 ASAH2Q9NR71 780 aa11.29□□□□□ -0.6
DDX39B-220ENST00000482195 TNFSF13BQ9Y275 285 aa11.29□□□□□ -0.6
DDX39B-220ENST00000482195 PIAS3Q9Y6X2 628 aa11.29□□□□□ -0.6
DDX39B-220ENST00000482195 SPAG17Q6Q759 2223 aa11.29□□□□□ -0.6
DDX39B-220ENST00000482195 NUP210Q8TEM1 1887 aaPredicted RBP11.29□□□□□ -0.6
DDX39B-220ENST00000482195 MAP1BP46821 2468 aaKnown RBP11.29□□□□□ -0.6
DDX39B-220ENST00000482195 TCHHQ07283 1943 aa11.29□□□□□ -0.6
DDX39B-220ENST00000482195 DCDC2BA2VCK2 349 aa11.28□□□□□ -0.6
DDX39B-220ENST00000482195 SYN3O14994 580 aa11.28□□□□□ -0.6
DDX39B-220ENST00000482195 TBC1D4O60343 1298 aa11.28□□□□□ -0.6
DDX39B-220ENST00000482195 LILRB5O75023 590 aa11.28□□□□□ -0.6
DDX39B-220ENST00000482195 AP1G2O75843 785 aa11.28□□□□□ -0.6
DDX39B-220ENST00000482195 SEC24AO95486 1093 aa11.28□□□□□ -0.6
DDX39B-220ENST00000482195 GJA1P17302 382 aa11.28□□□□□ -0.6
DDX39B-220ENST00000482195 CCR2P41597 374 aa11.28□□□□□ -0.6
DDX39B-220ENST00000482195 MATR3P43243 847 aaKnown RBP eCLIP11.28□□□□□ -0.66e-9■□□□□ 9.9
DDX39B-220ENST00000482195 NRLP54845 237 aa11.28□□□□□ -0.6
DDX39B-220ENST00000482195 ANAPC15P60006 121 aa11.28□□□□□ -0.6
DDX39B-220ENST00000482195 SPEM2Q0P670 501 aa11.28□□□□□ -0.6
DDX39B-220ENST00000482195 TWF1Q12792 350 aa11.28□□□□□ -0.6
DDX39B-220ENST00000482195 TTC38Q5R3I4 469 aa11.28□□□□□ -0.6
DDX39B-220ENST00000482195 SLC8B1Q6J4K2 584 aa11.28□□□□□ -0.6
DDX39B-220ENST00000482195 YAF2Q8IY57 180 aa11.28□□□□□ -0.6
DDX39B-220ENST00000482195 SNX29Q8TEQ0 813 aa11.28□□□□□ -0.6
DDX39B-220ENST00000482195 FAM3CQ92520 227 aa11.28□□□□□ -0.6
DDX39B-220ENST00000482195 IRF7Q92985 503 aa11.28□□□□□ -0.6
DDX39B-220ENST00000482195 C18orf25Q96B23 403 aaPredicted RBP11.28□□□□□ -0.6
DDX39B-220ENST00000482195 C8orf76Q96K31 380 aa11.28□□□□□ -0.6
DDX39B-220ENST00000482195 ZNF512Q96ME7 567 aaPredicted RBP11.28□□□□□ -0.6
DDX39B-220ENST00000482195 ASB16Q96NS5 453 aa11.28□□□□□ -0.6
DDX39B-220ENST00000482195 MRPL4Q9BYD3 311 aaKnown RBP11.28□□□□□ -0.6
DDX39B-220ENST00000482195 FAM126AQ9BYI3 521 aaPredicted RBP11.28□□□□□ -0.6
DDX39B-220ENST00000482195 CHRDQ9H2X0 955 aa11.28□□□□□ -0.6
DDX39B-220ENST00000482195 GDPD2Q9HCC8 539 aa11.28□□□□□ -0.6
DDX39B-220ENST00000482195 AVENQ9NQS1 362 aaPredicted RBP11.28□□□□□ -0.6
DDX39B-220ENST00000482195 DDX19AQ9NUU7 478 aaKnown RBP11.28□□□□□ -0.6
DDX39B-220ENST00000482195 ANKFY1Q9P2R3 1169 aa11.28□□□□□ -0.6
DDX39B-220ENST00000482195 FBXL5Q9UKA1 691 aa11.28□□□□□ -0.6
DDX39B-220ENST00000482195 PCDHGC3Q9UN70 934 aa11.28□□□□□ -0.6
DDX39B-220ENST00000482195 KIAA1024Q9UPX6 916 aa11.28□□□□□ -0.6
DDX39B-220ENST00000482195 ZNF263O14978 683 aa11.27□□□□□ -0.61
DDX39B-220ENST00000482195 HIP1RO75146 1068 aa11.27□□□□□ -0.61
DDX39B-220ENST00000482195 ABLIM3O94929 683 aa11.27□□□□□ -0.61
DDX39B-220ENST00000482195 ATF2P15336 505 aa11.27□□□□□ -0.61
DDX39B-220ENST00000482195 PSMC3P17980 439 aa11.27□□□□□ -0.61
DDX39B-220ENST00000482195 VIPR2P41587 438 aa11.27□□□□□ -0.61
DDX39B-220ENST00000482195 CCR3P51677 355 aa11.27□□□□□ -0.61
DDX39B-220ENST00000482195 ECM1Q16610 540 aa11.27□□□□□ -0.61
DDX39B-220ENST00000482195 DMRTA1Q5VZB9 504 aa11.27□□□□□ -0.61
DDX39B-220ENST00000482195 VITQ6UXI7 678 aa11.27□□□□□ -0.61
DDX39B-220ENST00000482195 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.27□□□□□ -0.61
DDX39B-220ENST00000482195 TCEAL8Q8IYN2 117 aa11.27□□□□□ -0.61
DDX39B-220ENST00000482195 ZSCAN18Q8TBC5 510 aaPredicted RBP11.27□□□□□ -0.61
DDX39B-220ENST00000482195 FAM200AQ8TCP9 573 aa11.27□□□□□ -0.61
DDX39B-220ENST00000482195 CSGALNACT1Q8TDX6 532 aa11.27□□□□□ -0.61
DDX39B-220ENST00000482195 SMARCD2Q92925 531 aa11.27□□□□□ -0.61
DDX39B-220ENST00000482195 ACAP3Q96P50 834 aa11.27□□□□□ -0.61
DDX39B-220ENST00000482195 ACO2Q99798 780 aaKnown RBP11.27□□□□□ -0.61
DDX39B-220ENST00000482195 RTKNQ9BST9 563 aa11.27□□□□□ -0.61
DDX39B-220ENST00000482195 TARS2Q9BW92 718 aaKnown RBP11.27□□□□□ -0.61
DDX39B-220ENST00000482195 LMAN1LQ9HAT1 526 aa11.27□□□□□ -0.61
DDX39B-220ENST00000482195 ZNF334Q9HCZ1 680 aaPredicted RBP11.27□□□□□ -0.61
DDX39B-220ENST00000482195 PARD6AQ9NPB6 346 aa11.27□□□□□ -0.61
DDX39B-220ENST00000482195 KMT5AQ9NQR1 393 aa11.27□□□□□ -0.61
DDX39B-220ENST00000482195 LRWD1Q9UFC0 647 aa11.27□□□□□ -0.61
DDX39B-220ENST00000482195 NOL7Q9UMY1 257 aaKnown RBP11.27□□□□□ -0.61
DDX39B-220ENST00000482195 SDK1Q7Z5N4 2213 aa11.27□□□□□ -0.61
DDX39B-220ENST00000482195 ATG2BQ96BY7 2078 aa11.26□□□□□ -0.61
DDX39B-220ENST00000482195 TSC2P49815 1807 aa11.26□□□□□ -0.61
DDX39B-220ENST00000482195 NRG2O14511 850 aaPredicted RBP11.26□□□□□ -0.61
DDX39B-220ENST00000482195 MCF2P10911 925 aa11.26□□□□□ -0.61
DDX39B-220ENST00000482195 MUTP22033 750 aa11.26□□□□□ -0.61
DDX39B-220ENST00000482195 CCNE1P24864 410 aa11.26□□□□□ -0.61
DDX39B-220ENST00000482195 MARCKSP29966 332 aaPredicted RBP11.26□□□□□ -0.61
DDX39B-220ENST00000482195 NPTX2P47972 431 aa11.26□□□□□ -0.61
DDX39B-220ENST00000482195 NEK4P51957 841 aa11.26□□□□□ -0.61
DDX39B-220ENST00000482195 KPNA1P52294 538 aaPredicted RBP11.26□□□□□ -0.61
DDX39B-220ENST00000482195 SATB1Q01826 763 aa11.26□□□□□ -0.61
DDX39B-220ENST00000482195 ORC2Q13416 577 aaPredicted RBP11.26□□□□□ -0.61
DDX39B-220ENST00000482195 FZD5Q13467 585 aa11.26□□□□□ -0.61
DDX39B-220ENST00000482195 TEAD2Q15562 447 aa11.26□□□□□ -0.61
DDX39B-220ENST00000482195 ZRSR1Q15695 479 aaKnown RBP11.26□□□□□ -0.61
DDX39B-220ENST00000482195 TPGS2Q68CL5 300 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms