RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 AP3M2P53677 418 aa16.29■□□□□ 0.2
C9orf3-218ENST00000482056 ZNF280AP59817 542 aaPredicted RBP16.29■□□□□ 0.2
C9orf3-218ENST00000482056 VSTM1Q6UX27 236 aa16.29■□□□□ 0.2
C9orf3-218ENST00000482056 PPP1R21Q6ZMI0 780 aa16.29■□□□□ 0.2
C9orf3-218ENST00000482056 SCYL3Q8IZE3 742 aa16.29■□□□□ 0.2
C9orf3-218ENST00000482056 ZNF280CQ8ND82 737 aa16.29■□□□□ 0.2
C9orf3-218ENST00000482056 FEZF2Q8TBJ5 459 aa16.29■□□□□ 0.2
C9orf3-218ENST00000482056 MAGEC3Q8TD91 643 aa16.29■□□□□ 0.2
C9orf3-218ENST00000482056 HERPUD2Q9BSE4 406 aa16.29■□□□□ 0.2
C9orf3-218ENST00000482056 PORCNQ9H237 461 aa16.29■□□□□ 0.2
C9orf3-218ENST00000482056 ZNF302Q9NR11 478 aa16.29■□□□□ 0.2
C9orf3-218ENST00000482056 DNAJC17Q9NVM6 304 aaKnown RBP16.29■□□□□ 0.2
C9orf3-218ENST00000482056 CNTN6Q9UQ52 1028 aa16.29■□□□□ 0.2
C9orf3-218ENST00000482056 NEU2Q9Y3R4 380 aa16.29■□□□□ 0.2
C9orf3-218ENST00000482056 RGS20O76081 388 aa16.29■□□□□ 0.2
C9orf3-218ENST00000482056 OATP04181 439 aa16.29■□□□□ 0.2
C9orf3-218ENST00000482056 CALB1P05937 261 aa16.29■□□□□ 0.2
C9orf3-218ENST00000482056 ABHD2P08910 425 aa16.29■□□□□ 0.2
C9orf3-218ENST00000482056 GJC1P36383 396 aa16.29■□□□□ 0.2
C9orf3-218ENST00000482056 TAS2R40P59535 323 aa16.29■□□□□ 0.2
C9orf3-218ENST00000482056 NOP14P78316 857 aaKnown RBP16.29■□□□□ 0.2
C9orf3-218ENST00000482056 LRRC14Q15048 493 aa16.29■□□□□ 0.2
C9orf3-218ENST00000482056 C2CD6Q53TS8 623 aa16.29■□□□□ 0.2
C9orf3-218ENST00000482056 ZFYVE27Q5T4F4 411 aa16.29■□□□□ 0.2
C9orf3-218ENST00000482056 ANKRD35Q8N283 1001 aa16.29■□□□□ 0.2
C9orf3-218ENST00000482056 ANKRD42Q8N9B4 389 aa16.29■□□□□ 0.2
C9orf3-218ENST00000482056 CCDC63Q8NA47 563 aa16.29■□□□□ 0.2
C9orf3-218ENST00000482056 REPS2Q8NFH8 660 aa16.29■□□□□ 0.2
C9orf3-218ENST00000482056 CKAP2Q8WWK9 683 aa16.29■□□□□ 0.2
C9orf3-218ENST00000482056 SLC7A3Q8WY07 619 aa16.29■□□□□ 0.2
C9orf3-218ENST00000482056 WNK4Q96J92 1243 aa16.29■□□□□ 0.2
C9orf3-218ENST00000482056 CFAP57Q96MR6 1250 aa16.29■□□□□ 0.2
C9orf3-218ENST00000482056 YY1AP1Q9H869 796 aa16.29■□□□□ 0.2
C9orf3-218ENST00000482056 CYP39A1Q9NYL5 469 aa16.29■□□□□ 0.2
C9orf3-218ENST00000482056 SIP14410 1827 aa16.29■□□□□ 0.2
C9orf3-218ENST00000482056 TJP3O95049 919 aa16.28■□□□□ 0.2
C9orf3-218ENST00000482056 CD58P19256 250 aa16.28■□□□□ 0.2
C9orf3-218ENST00000482056 SLC8A1P32418 973 aa16.28■□□□□ 0.2
C9orf3-218ENST00000482056 STX2P32856 288 aa16.28■□□□□ 0.2
C9orf3-218ENST00000482056 NFX1Q12986 1120 aaKnown RBP16.28■□□□□ 0.2
C9orf3-218ENST00000482056 NR1H3Q13133 447 aa16.28■□□□□ 0.2
C9orf3-218ENST00000482056 LLGL2Q6P1M3 1020 aa16.28■□□□□ 0.2
C9orf3-218ENST00000482056 ZCCHC9Q8N567 271 aaKnown RBP16.28■□□□□ 0.2
C9orf3-218ENST00000482056 TMEM143Q96AN5 459 aa16.28■□□□□ 0.2
C9orf3-218ENST00000482056 FAM84AQ96KN4 292 aa16.28■□□□□ 0.2
C9orf3-218ENST00000482056 TTC25Q96NG3 672 aa16.28■□□□□ 0.2
C9orf3-218ENST00000482056 TACO1Q9BSH4 297 aaKnown RBP16.28■□□□□ 0.2
C9orf3-218ENST00000482056 TEX13BQ9BXU2 312 aa16.28■□□□□ 0.2
C9orf3-218ENST00000482056 APOBEC3GQ9HC16 384 aaKnown RBP16.28■□□□□ 0.2
C9orf3-218ENST00000482056 ANKFY1Q9P2R3 1169 aa16.28■□□□□ 0.2
C9orf3-218ENST00000482056 O00370 1275 aa16.27■□□□□ 0.2
C9orf3-218ENST00000482056 ATP2A1O14983 1001 aa16.27■□□□□ 0.2
C9orf3-218ENST00000482056 OAS1P00973 400 aaKnown RBP16.27■□□□□ 0.2
C9orf3-218ENST00000482056 KCNA3P22001 575 aa16.27■□□□□ 0.2
C9orf3-218ENST00000482056 KLRC2P26717 231 aa16.27■□□□□ 0.2
C9orf3-218ENST00000482056 COPS2P61201 443 aa16.27■□□□□ 0.2
C9orf3-218ENST00000482056 MCL1Q07820 350 aa16.27■□□□□ 0.2
C9orf3-218ENST00000482056 NUGGCQ68CJ6 796 aa16.27■□□□□ 0.2
C9orf3-218ENST00000482056 HIBCHQ6NVY1 386 aaPredicted RBP16.27■□□□□ 0.2
C9orf3-218ENST00000482056 CRELD2Q6UXH1 353 aaPredicted RBP16.27■□□□□ 0.2
C9orf3-218ENST00000482056 MTFR1LQ9H019 292 aa16.27■□□□□ 0.2
C9orf3-218ENST00000482056 DHX33Q9H6R0 707 aaKnown RBP16.27■□□□□ 0.2
C9orf3-218ENST00000482056 FGFR1OP2Q9NVK5 253 aa16.27■□□□□ 0.2
C9orf3-218ENST00000482056 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.27■□□□□ 0.2
C9orf3-218ENST00000482056 ARL2BPQ9Y2Y0 163 aa16.27■□□□□ 0.2
C9orf3-218ENST00000482056 CD2APQ9Y5K6 639 aa16.27■□□□□ 0.2
C9orf3-218ENST00000482056 PTPRJQ12913 1337 aa16.27■□□□□ 0.2
C9orf3-218ENST00000482056 A0A0B4J269 797 aa16.27■□□□□ 0.19
C9orf3-218ENST00000482056 C19orf81C9J6K1 198 aa16.27■□□□□ 0.19
C9orf3-218ENST00000482056 MGRN1O60291 552 aa16.27■□□□□ 0.19
C9orf3-218ENST00000482056 LSM8O95777 96 aaKnown RBP16.27■□□□□ 0.19
C9orf3-218ENST00000482056 GLRA2P23416 452 aa16.27■□□□□ 0.19
C9orf3-218ENST00000482056 ARL2P36404 184 aa16.27■□□□□ 0.19
C9orf3-218ENST00000482056 RFC5P40937 340 aa16.27■□□□□ 0.19
C9orf3-218ENST00000482056 MAGEA4P43358 317 aa16.27■□□□□ 0.19
C9orf3-218ENST00000482056 TAP1Q03518 808 aa16.27■□□□□ 0.19
C9orf3-218ENST00000482056 NCOA4Q13772 614 aa16.27■□□□□ 0.19
C9orf3-218ENST00000482056 P3H1Q32P28 736 aa16.27■□□□□ 0.19
C9orf3-218ENST00000482056 EAPPQ56P03 285 aaPredicted RBP16.27■□□□□ 0.19
C9orf3-218ENST00000482056 LRRC38Q5VT99 294 aa16.27■□□□□ 0.19
C9orf3-218ENST00000482056 DRICH1Q6PGQ1 229 aaPredicted RBP16.27■□□□□ 0.19
C9orf3-218ENST00000482056 SPATA21Q7Z572 469 aa16.27■□□□□ 0.19
C9orf3-218ENST00000482056 ASAP3Q8TDY4 903 aa16.27■□□□□ 0.19
C9orf3-218ENST00000482056 ZKSCAN4Q969J2 545 aaPredicted RBP16.27■□□□□ 0.19
C9orf3-218ENST00000482056 GRAMD1AQ96CP6 724 aa16.27■□□□□ 0.19
C9orf3-218ENST00000482056 C12orf42Q96LP6 360 aa16.27■□□□□ 0.19
C9orf3-218ENST00000482056 RBM15Q96T37 977 aaKnown RBP eCLIP16.27■□□□□ 0.19
C9orf3-218ENST00000482056 TMEM134Q9H6X4 195 aa16.27■□□□□ 0.19
C9orf3-218ENST00000482056 CD248Q9HCU0 757 aa16.27■□□□□ 0.19
C9orf3-218ENST00000482056 CTNNAL1Q9UBT7 734 aa16.27■□□□□ 0.19
C9orf3-218ENST00000482056 ZNF214Q9UL59 606 aaPredicted RBP16.27■□□□□ 0.19
C9orf3-218ENST00000482056 ADAMTS5Q9UNA0 930 aa16.27■□□□□ 0.19
C9orf3-218ENST00000482056 MAFBQ9Y5Q3 323 aaPredicted RBP16.27■□□□□ 0.19
C9orf3-218ENST00000482056 KRT1P04264 644 aa16.26■□□□□ 0.19
C9orf3-218ENST00000482056 STXBP2Q15833 593 aa16.26■□□□□ 0.19
C9orf3-218ENST00000482056 FAM133BQ5BKY9 247 aaKnown RBP16.26■□□□□ 0.19
C9orf3-218ENST00000482056 DAB2IPQ5VWQ8 1189 aa16.26■□□□□ 0.19
C9orf3-218ENST00000482056 FAM212AQ96EL1 285 aa16.26■□□□□ 0.19
C9orf3-218ENST00000482056 MAGEB18Q96M61 343 aa16.26■□□□□ 0.19
C9orf3-218ENST00000482056 TGS1Q96RS0 853 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms