RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 GSX1Q9H4S2 264 aaPredicted RBP3.76□□□□□ -1.81
SMC6-208ENST00000481708 RAD18Q9NS91 495 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 PCDHGB4Q9UN71 923 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 AP4E1Q9UPM8 1137 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 DAGLAQ9Y4D2 1042 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 ROBO3Q96MS0 1386 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 MEGF11A6BM72 1044 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 SYT5O00445 386 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 MAN2B1O00754 1011 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 FANCGO15287 622 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 WFS1O76024 890 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 TGDSO95455 350 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 HSPA4LO95757 839 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 PORP16435 677 aaPredicted RBP3.76□□□□□ -1.81
SMC6-208ENST00000481708 RGS2P41220 211 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 ARL13BQ3SXY8 428 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 C3orf38Q5JPI3 329 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 CATSPEREQ5SY80 951 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 GJC2Q5T442 439 aaPredicted RBP3.76□□□□□ -1.81
SMC6-208ENST00000481708 SVOPQ8N4V2 548 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 CCDC33Q8N5R6 958 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 ISL2Q96A47 359 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 ZUFSPQ96AP4 578 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 ZSCAN31Q96LW9 406 aaPredicted RBP3.76□□□□□ -1.81
SMC6-208ENST00000481708 KCNJ15Q99712 375 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 UNC45AQ9H3U1 944 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 CNPY2Q9Y2B0 182 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 ACTL7BQ9Y614 415 aa3.76□□□□□ -1.81
SMC6-208ENST00000481708 PRSS38A1L453 326 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 TRIM64CA6NLI5 447 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 GOLGA6L22H0YM25 854 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 CHL1O00533 1208 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 PTP4A3O75365 173 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 IL11P20809 199 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 AFMP43652 599 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 NKX6-1P78426 367 aaPredicted RBP3.75□□□□□ -1.81
SMC6-208ENST00000481708 PPP3CAQ08209 521 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 ITPK1Q13572 414 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 GRIK4Q16099 956 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 SNX30Q5VWJ9 437 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 DIEXFQ68CQ4 756 aaKnown RBP3.75□□□□□ -1.81
SMC6-208ENST00000481708 GALNT4Q8N4A0 578 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 GLIS1Q8NBF1 620 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 C2CD4AQ8NCU7 369 aaPredicted RBP3.75□□□□□ -1.81
SMC6-208ENST00000481708 TBC1D31Q96DN5 1066 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 SDF4Q9BRK5 362 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 ARHGAP39Q9C0H5 1083 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 OLA1Q9NTK5 396 aaKnown RBP3.75□□□□□ -1.81
SMC6-208ENST00000481708 TBK1Q9UHD2 729 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 PCDHB12Q9Y5F1 795 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 C1QTNF9BB2RNN3 333 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 FYB1O15117 783 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 ERAL1O75616 437 aaKnown RBP3.75□□□□□ -1.81
SMC6-208ENST00000481708 SOAT2O75908 522 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 ALX3O95076 343 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 KRT15P19012 456 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 FGFR2P21802 821 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 GRK3P35626 688 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 SOX4Q06945 474 aaPredicted RBP3.75□□□□□ -1.81
SMC6-208ENST00000481708 LRP8Q14114 963 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.75□□□□□ -1.81
SMC6-208ENST00000481708 MUM1Q2TAK8 710 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 TMCO3Q6UWJ1 677 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 HHIPL2Q6UWX4 724 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 RBM12BQ8IXT5 1001 aaKnown RBP3.75□□□□□ -1.81
SMC6-208ENST00000481708 MSL3Q8N5Y2 521 aaKnown RBP3.75□□□□□ -1.81
SMC6-208ENST00000481708 SMG8Q8ND04 991 aaKnown RBP3.75□□□□□ -1.81
SMC6-208ENST00000481708 OR8H1Q8NGG4 311 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 TDRD7Q8NHU6 1098 aaKnown RBP3.75□□□□□ -1.81
SMC6-208ENST00000481708 HEPHQ9BQS7 1158 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 CNPPD1Q9BV87 410 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 ZDHHC7Q9NXF8 308 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 ZNF711Q9Y462 761 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 TTLL3Q9Y4R7 772 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 PCDHA2Q9Y5H9 948 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 AGAP14A8MT82 685 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 SKAP2O75563 359 aaPredicted RBP3.75□□□□□ -1.81
SMC6-208ENST00000481708 KIF11P52732 1056 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 IFI35P80217 286 aaPredicted RBP3.75□□□□□ -1.81
SMC6-208ENST00000481708 OCRLQ01968 901 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 PLCB4Q15147 1175 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 NUTM2GQ5VZR2 741 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 TANGO2Q6ICL3 276 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 CCDC62Q6P9F0 684 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 RSPO2Q6UXX9 243 aaPredicted RBP3.75□□□□□ -1.81
SMC6-208ENST00000481708 C16orf59Q7L2K0 433 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 DAAM2Q86T65 1068 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 HID1Q8IV36 788 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 OXR1Q8N573 874 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 NEDD1Q8NHV4 660 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 ZFPM2Q8WW38 1151 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 DPF3Q92784 378 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 ZFYVE21Q9BQ24 234 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 SLF1Q9BQI6 1058 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 PDCD2LQ9BRP1 358 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 LSM14BQ9BX40 385 aaKnown RBP3.75□□□□□ -1.81
SMC6-208ENST00000481708 TXLNGYQ9BZA5 131 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 RNF208Q9H0X6 261 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 BABAM1Q9NWV8 329 aa3.75□□□□□ -1.81
SMC6-208ENST00000481708 TMOD4Q9NZQ9 345 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms