RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 RNF19BQ6ZMZ0 732 aa14.65□□□□□ -0.06
NDC1-202ENST00000480952 KBTBD6Q86V97 674 aa14.65□□□□□ -0.06
NDC1-202ENST00000480952 ARID3BQ8IVW6 561 aaPredicted RBP14.65□□□□□ -0.06
NDC1-202ENST00000480952 APPL2Q8NEU8 664 aa14.65□□□□□ -0.06
NDC1-202ENST00000480952 MTMR9Q96QG7 549 aa14.65□□□□□ -0.06
NDC1-202ENST00000480952 GTSE1Q9NYZ3 720 aa14.65□□□□□ -0.06
NDC1-202ENST00000480952 ZMIZ1Q9ULJ6 1067 aa14.65□□□□□ -0.06
NDC1-202ENST00000480952 FRYQ5TBA9 3013 aa14.65□□□□□ -0.06
NDC1-202ENST00000480952 STK36Q9NRP7 1315 aa14.65□□□□□ -0.06
NDC1-202ENST00000480952 C1QTNF9BB2RNN3 333 aa14.64□□□□□ -0.07
NDC1-202ENST00000480952 K7ERI5 159 aa14.64□□□□□ -0.07
NDC1-202ENST00000480952 EXTL3O43909 919 aa14.64□□□□□ -0.07
NDC1-202ENST00000480952 MED24O75448 989 aa14.64□□□□□ -0.07
NDC1-202ENST00000480952 C1QTNF9P0C862 333 aa14.64□□□□□ -0.07
NDC1-202ENST00000480952 MARCKSP29966 332 aaPredicted RBP14.64□□□□□ -0.07
NDC1-202ENST00000480952 MCM4P33991 863 aa14.64□□□□□ -0.07
NDC1-202ENST00000480952 CCINQ13939 588 aa14.64□□□□□ -0.07
NDC1-202ENST00000480952 ARHGAP29Q52LW3 1261 aa14.64□□□□□ -0.07
NDC1-202ENST00000480952 XKR4Q5GH76 650 aa14.64□□□□□ -0.07
NDC1-202ENST00000480952 RNF43Q68DV7 783 aa14.64□□□□□ -0.07
NDC1-202ENST00000480952 UNQ6494/PRO21346Q6UXR6 183 aa14.64□□□□□ -0.07
NDC1-202ENST00000480952 CEP120Q8N960 986 aa14.64□□□□□ -0.07
NDC1-202ENST00000480952 WASF1Q92558 559 aa14.64□□□□□ -0.07
NDC1-202ENST00000480952 DDX12PQ92771 950 aa14.64□□□□□ -0.07
NDC1-202ENST00000480952 ZFYVE19Q96K21 471 aa14.64□□□□□ -0.07
NDC1-202ENST00000480952 SUSD3Q96L08 255 aa14.64□□□□□ -0.07
NDC1-202ENST00000480952 ZMAT2Q96NC0 199 aaKnown RBP14.64□□□□□ -0.07
NDC1-202ENST00000480952 SMOC1Q9H4F8 434 aa14.64□□□□□ -0.07
NDC1-202ENST00000480952 POLD4Q9HCU8 107 aa14.64□□□□□ -0.07
NDC1-202ENST00000480952 PDRG1Q9NUG6 133 aa14.64□□□□□ -0.07
NDC1-202ENST00000480952 TNFSF13BQ9Y275 285 aa14.64□□□□□ -0.07
NDC1-202ENST00000480952 PCDHGA5Q9Y5G8 931 aa14.64□□□□□ -0.07
NDC1-202ENST00000480952 TICRRQ7Z2Z1 1910 aa14.64□□□□□ -0.07
NDC1-202ENST00000480952 CEP295Q9C0D2 2601 aa14.63□□□□□ -0.07
NDC1-202ENST00000480952 FAM208BQ5VWN6 2430 aa14.63□□□□□ -0.07
NDC1-202ENST00000480952 MPLP40238 635 aa14.63□□□□□ -0.07
NDC1-202ENST00000480952 EPHB3P54753 998 aa14.63□□□□□ -0.07
NDC1-202ENST00000480952 PLD1Q13393 1074 aa14.63□□□□□ -0.07
NDC1-202ENST00000480952 PLA2G2CQ5R387 149 aa14.63□□□□□ -0.07
NDC1-202ENST00000480952 STXBP5Q5T5C0 1151 aa14.63□□□□□ -0.07
NDC1-202ENST00000480952 TNFRSF25Q93038 417 aa14.63□□□□□ -0.07
NDC1-202ENST00000480952 C18orf25Q96B23 403 aaPredicted RBP14.63□□□□□ -0.07
NDC1-202ENST00000480952 TBC1D32Q96NH3 1257 aa14.63□□□□□ -0.07
NDC1-202ENST00000480952 ACAP3Q96P50 834 aa14.63□□□□□ -0.07
NDC1-202ENST00000480952 POLR3CQ9BUI4 534 aaPredicted RBP14.63□□□□□ -0.07
NDC1-202ENST00000480952 VPS45Q9NRW7 570 aa14.63□□□□□ -0.07
NDC1-202ENST00000480952 ORC3Q9UBD5 711 aaPredicted RBP14.63□□□□□ -0.07
NDC1-202ENST00000480952 SLC8A2Q9UPR5 921 aa14.63□□□□□ -0.07
NDC1-202ENST00000480952 YIPF1Q9Y548 306 aa14.63□□□□□ -0.07
NDC1-202ENST00000480952 RALGAPA1Q6GYQ0 2036 aa14.63□□□□□ -0.07
NDC1-202ENST00000480952 CCDC163A0A0D9SF12 145 aa14.62□□□□□ -0.07
NDC1-202ENST00000480952 ATG13O75143 517 aa14.62□□□□□ -0.07
NDC1-202ENST00000480952 COL4A2P08572 1712 aa14.62□□□□□ -0.07
NDC1-202ENST00000480952 HOXB3P14651 431 aaPredicted RBP14.62□□□□□ -0.07
NDC1-202ENST00000480952 KCNE1P15382 129 aa14.62□□□□□ -0.07
NDC1-202ENST00000480952 ALDH1A3P47895 512 aa14.62□□□□□ -0.07
NDC1-202ENST00000480952 NOVA1P51513 510 aaKnown RBP14.62□□□□□ -0.07
NDC1-202ENST00000480952 ZNF568Q3ZCX4 644 aa14.62□□□□□ -0.07
NDC1-202ENST00000480952 ERMNQ8TAM6 284 aa14.62□□□□□ -0.07
NDC1-202ENST00000480952 KIFAP3Q92845 792 aa14.62□□□□□ -0.07
NDC1-202ENST00000480952 LRRC3BQ96PB8 259 aa14.62□□□□□ -0.07
NDC1-202ENST00000480952 PGLYRP2Q96PD5 576 aa14.62□□□□□ -0.07
NDC1-202ENST00000480952 ACO2Q99798 780 aaKnown RBP14.62□□□□□ -0.07
NDC1-202ENST00000480952 TCHPQ9BT92 498 aa14.62□□□□□ -0.07
NDC1-202ENST00000480952 LRRC3Q9BY71 257 aa14.62□□□□□ -0.07
NDC1-202ENST00000480952 CDT1Q9H211 546 aa14.62□□□□□ -0.07
NDC1-202ENST00000480952 ATXN3LQ9H3M9 355 aa14.62□□□□□ -0.07
NDC1-202ENST00000480952 PCDHB8Q9UN66 801 aa14.62□□□□□ -0.07
NDC1-202ENST00000480952 CCDC169A6NNP5 214 aa14.61□□□□□ -0.07
NDC1-202ENST00000480952 WNT7AO00755 349 aa14.61□□□□□ -0.07
NDC1-202ENST00000480952 AKAP3O75969 853 aa14.61□□□□□ -0.07
NDC1-202ENST00000480952 PLCB2Q00722 1185 aa14.61□□□□□ -0.07
NDC1-202ENST00000480952 YWHAHQ04917 246 aaPredicted RBP14.61□□□□□ -0.07
NDC1-202ENST00000480952 TNK2Q07912 1038 aa14.61□□□□□ -0.07
NDC1-202ENST00000480952 FOXC1Q12948 553 aa14.61□□□□□ -0.07
NDC1-202ENST00000480952 DUSP4Q13115 394 aa14.61□□□□□ -0.07
NDC1-202ENST00000480952 ACAP1Q15027 740 aa14.61□□□□□ -0.07
NDC1-202ENST00000480952 PTPAQ15257 358 aa14.61□□□□□ -0.07
NDC1-202ENST00000480952 ITPRIPL2Q3MIP1 535 aa14.61□□□□□ -0.07
NDC1-202ENST00000480952 TMC8Q8IU68 726 aa14.61□□□□□ -0.07
NDC1-202ENST00000480952 KDF1Q8NAX2 398 aaPredicted RBP14.61□□□□□ -0.07
NDC1-202ENST00000480952 ZC3H10Q96K80 434 aaKnown RBP14.61□□□□□ -0.07
NDC1-202ENST00000480952 TMEM209Q96SK2 561 aa14.61□□□□□ -0.07
NDC1-202ENST00000480952 MRPL4Q9BYD3 311 aaKnown RBP14.61□□□□□ -0.07
NDC1-202ENST00000480952 TM6SF1Q9BZW5 370 aa14.61□□□□□ -0.07
NDC1-202ENST00000480952 DNAJC25Q9H1X3 360 aa14.61□□□□□ -0.07
NDC1-202ENST00000480952 TMEM60Q9H2L4 133 aa14.61□□□□□ -0.07
NDC1-202ENST00000480952 THG1LQ9NWX6 298 aaKnown RBP14.61□□□□□ -0.07
NDC1-202ENST00000480952 OBP2AQ9NY56 170 aa14.61□□□□□ -0.07
NDC1-202ENST00000480952 CNTN3Q9P232 1028 aa14.61□□□□□ -0.07
NDC1-202ENST00000480952 TPCN1Q9ULQ1 816 aa14.61□□□□□ -0.07
NDC1-202ENST00000480952 SDK1Q7Z5N4 2213 aa14.61□□□□□ -0.07
NDC1-202ENST00000480952 BTBD18B2RXH4 712 aa14.6□□□□□ -0.07
NDC1-202ENST00000480952 PFKFB2O60825 505 aa14.6□□□□□ -0.07
NDC1-202ENST00000480952 FGF19O95750 216 aa14.6□□□□□ -0.07
NDC1-202ENST00000480952 OR4Q2P0C623 313 aa14.6□□□□□ -0.07
NDC1-202ENST00000480952 MCF2P10911 925 aa14.6□□□□□ -0.07
NDC1-202ENST00000480952 RPA1P27694 616 aa14.6□□□□□ -0.07
NDC1-202ENST00000480952 MCM7P33993 719 aa14.6□□□□□ -0.07
NDC1-202ENST00000480952 GRSF1Q12849 480 aaKnown RBP eCLIP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms