RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 ZC2HC1CQ53FD0 456 aaPredicted RBP16.56■□□□□ 0.24
LIMS3-203ENST00000480744 PRSS36Q5K4E3 855 aa16.56■□□□□ 0.24
LIMS3-203ENST00000480744 TANGO2Q6ICL3 276 aa16.56■□□□□ 0.24
LIMS3-203ENST00000480744 JADE1Q6IE81 842 aa16.56■□□□□ 0.24
LIMS3-203ENST00000480744 SLC39A4Q6P5W5 647 aa16.56■□□□□ 0.24
LIMS3-203ENST00000480744 POTEHQ6S545 545 aa16.56■□□□□ 0.24
LIMS3-203ENST00000480744 USP49Q70CQ1 688 aa16.56■□□□□ 0.24
LIMS3-203ENST00000480744 KRI1Q8N9T8 703 aaKnown RBP16.56■□□□□ 0.24
LIMS3-203ENST00000480744 BEST2Q8NFU1 509 aa16.56■□□□□ 0.24
LIMS3-203ENST00000480744 KCNG4Q8TDN1 519 aa16.56■□□□□ 0.24
LIMS3-203ENST00000480744 EPSTI1Q96J88 318 aa16.56■□□□□ 0.24
LIMS3-203ENST00000480744 PGLYRP2Q96PD5 576 aa16.56■□□□□ 0.24
LIMS3-203ENST00000480744 DLGAP2Q9P1A6 1054 aa16.56■□□□□ 0.24
LIMS3-203ENST00000480744 CEP72Q9P209 647 aa16.56■□□□□ 0.24
LIMS3-203ENST00000480744 CLIC4Q9Y696 253 aa16.56■□□□□ 0.24
LIMS3-203ENST00000480744 R4GN57 208 aa16.56■□□□□ 0.24
LIMS3-203ENST00000480744 TULP1O00294 542 aaPredicted RBP16.55■□□□□ 0.24
LIMS3-203ENST00000480744 OAZ2O95190 189 aa16.55■□□□□ 0.24
LIMS3-203ENST00000480744 GLULP15104 373 aa16.55■□□□□ 0.24
LIMS3-203ENST00000480744 GJA1P17302 382 aa16.55■□□□□ 0.24
LIMS3-203ENST00000480744 CD72P21854 359 aa16.55■□□□□ 0.24
LIMS3-203ENST00000480744 CCR2P41597 374 aa16.55■□□□□ 0.24
LIMS3-203ENST00000480744 ACOT2P49753 483 aa16.55■□□□□ 0.24
LIMS3-203ENST00000480744 GTF2BQ00403 316 aa16.55■□□□□ 0.24
LIMS3-203ENST00000480744 CEBPZQ03701 1054 aaKnown RBP16.55■□□□□ 0.24
LIMS3-203ENST00000480744 CUL4AQ13619 759 aa16.55■□□□□ 0.24
LIMS3-203ENST00000480744 GRM2Q14416 872 aa16.55■□□□□ 0.24
LIMS3-203ENST00000480744 FAM78AQ5JUQ0 283 aa16.55■□□□□ 0.24
LIMS3-203ENST00000480744 TPRG1Q6ZUI0 275 aa16.55■□□□□ 0.24
LIMS3-203ENST00000480744 DYMQ7RTS9 669 aa16.55■□□□□ 0.24
LIMS3-203ENST00000480744 MAP4K3Q8IVH8 894 aa16.55■□□□□ 0.24
LIMS3-203ENST00000480744 C1orf210Q8IVY1 113 aa16.55■□□□□ 0.24
LIMS3-203ENST00000480744 ADSSL1Q8N142 457 aa16.55■□□□□ 0.24
LIMS3-203ENST00000480744 KCNN1Q92952 543 aa16.55■□□□□ 0.24
LIMS3-203ENST00000480744 BCO2Q9BYV7 579 aa16.55■□□□□ 0.24
LIMS3-203ENST00000480744 CCSER1Q9C0I3 900 aa16.55■□□□□ 0.24
LIMS3-203ENST00000480744 ASAH2Q9NR71 780 aa16.55■□□□□ 0.24
LIMS3-203ENST00000480744 CCDC39Q9UFE4 941 aa16.55■□□□□ 0.24
LIMS3-203ENST00000480744 CPSF3Q9UKF6 684 aaKnown RBP16.55■□□□□ 0.24
LIMS3-203ENST00000480744 MAFFQ9ULX9 164 aa16.55■□□□□ 0.24
LIMS3-203ENST00000480744 MTF2Q9Y483 593 aaPredicted RBP16.55■□□□□ 0.24
LIMS3-203ENST00000480744 YIPF1Q9Y548 306 aa16.55■□□□□ 0.24
LIMS3-203ENST00000480744 CFAP54Q96N23 3096 aa16.55■□□□□ 0.24
LIMS3-203ENST00000480744 FAM170BA6NMN3 283 aa16.54■□□□□ 0.24
LIMS3-203ENST00000480744 TISP43B9A030 160 aa16.54■□□□□ 0.24
LIMS3-203ENST00000480744 ANKRD63C9JTQ0 380 aa16.54■□□□□ 0.24
LIMS3-203ENST00000480744 NRG2O14511 850 aaPredicted RBP16.54■□□□□ 0.24
LIMS3-203ENST00000480744 NFICP08651 508 aa16.54■□□□□ 0.24
LIMS3-203ENST00000480744 ABCD1P33897 745 aa16.54■□□□□ 0.24
LIMS3-203ENST00000480744 DDIT3P35638 169 aa16.54■□□□□ 0.24
LIMS3-203ENST00000480744 AARSP49588 968 aaKnown RBP eCLIP16.54■□□□□ 0.24
LIMS3-203ENST00000480744 TMEM132DQ14C87 1099 aa16.54■□□□□ 0.24
LIMS3-203ENST00000480744 SPATA1Q5VX52 437 aa16.54■□□□□ 0.24
LIMS3-203ENST00000480744 ADALQ6DHV7 355 aa16.54■□□□□ 0.24
LIMS3-203ENST00000480744 OVOS1Q6IE37 1185 aa16.54■□□□□ 0.24
LIMS3-203ENST00000480744 FAM173BQ6P4H8 233 aa16.54■□□□□ 0.24
LIMS3-203ENST00000480744 SFR1Q86XK3 245 aa16.54■□□□□ 0.24
LIMS3-203ENST00000480744 CD302Q8IX05 232 aa16.54■□□□□ 0.24
LIMS3-203ENST00000480744 ELSPBP1Q96BH3 223 aa16.54■□□□□ 0.24
LIMS3-203ENST00000480744 TSPAN18Q96SJ8 248 aa16.54■□□□□ 0.24
LIMS3-203ENST00000480744 FIZ1Q96SL8 496 aa16.54■□□□□ 0.24
LIMS3-203ENST00000480744 DDX23Q9BUQ8 820 aaKnown RBP16.54■□□□□ 0.24
LIMS3-203ENST00000480744 ZFP14Q9HCL3 533 aa16.54■□□□□ 0.24
LIMS3-203ENST00000480744 SPATA6Q9NWH7 488 aaPredicted RBP16.54■□□□□ 0.24
LIMS3-203ENST00000480744 OR6C75A6NL08 312 aa16.53■□□□□ 0.24
LIMS3-203ENST00000480744 SP9P0CG40 484 aa16.53■□□□□ 0.24
LIMS3-203ENST00000480744 ODC1P11926 461 aa16.53■□□□□ 0.24
LIMS3-203ENST00000480744 FCARP24071 287 aa16.53■□□□□ 0.24
LIMS3-203ENST00000480744 TXLNAP40222 546 aa16.53■□□□□ 0.24
LIMS3-203ENST00000480744 DUSP4Q13115 394 aa16.53■□□□□ 0.24
LIMS3-203ENST00000480744 PTPAQ15257 358 aa16.53■□□□□ 0.24
LIMS3-203ENST00000480744 SENP8Q96LD8 212 aa16.53■□□□□ 0.24
LIMS3-203ENST00000480744 ASB16Q96NS5 453 aa16.53■□□□□ 0.24
LIMS3-203ENST00000480744 CLIC6Q96NY7 704 aa16.53■□□□□ 0.24
LIMS3-203ENST00000480744 OXCT2Q9BYC2 517 aaPredicted RBP16.53■□□□□ 0.24
LIMS3-203ENST00000480744 SLITRK6Q9H5Y7 841 aa16.53■□□□□ 0.24
LIMS3-203ENST00000480744 BRD9Q9H8M2 597 aa16.53■□□□□ 0.24
LIMS3-203ENST00000480744 LTB4R2Q9NPC1 389 aa16.53■□□□□ 0.24
LIMS3-203ENST00000480744 HEBP1Q9NRV9 189 aa16.53■□□□□ 0.24
LIMS3-203ENST00000480744 STK17AQ9UEE5 414 aa16.53■□□□□ 0.24
LIMS3-203ENST00000480744 FBXO2Q9UK22 296 aaPredicted RBP16.53■□□□□ 0.24
LIMS3-203ENST00000480744 AGO2Q9UKV8 859 aaKnown RBP16.53■□□□□ 0.24
LIMS3-203ENST00000480744 SLC27A5Q9Y2P5 690 aa16.53■□□□□ 0.24
LIMS3-203ENST00000480744 DMDP11532 3685 aa16.53■□□□□ 0.24
LIMS3-203ENST00000480744 SPTLC1O15269 473 aa16.52■□□□□ 0.24
LIMS3-203ENST00000480744 MICAL2O94851 1124 aa16.52■□□□□ 0.24
LIMS3-203ENST00000480744 VNN2O95498 520 aa16.52■□□□□ 0.24
LIMS3-203ENST00000480744 ADRB2P07550 413 aa16.52■□□□□ 0.24
LIMS3-203ENST00000480744 TYMPP19971 482 aa16.52■□□□□ 0.24
LIMS3-203ENST00000480744 EPHB3P54753 998 aa16.52■□□□□ 0.24
LIMS3-203ENST00000480744 LILRA4P59901 499 aa16.52■□□□□ 0.24
LIMS3-203ENST00000480744 RESTQ13127 1097 aa16.52■□□□□ 0.24
LIMS3-203ENST00000480744 GPR17Q13304 367 aa16.52■□□□□ 0.24
LIMS3-203ENST00000480744 PLD1Q13393 1074 aa16.52■□□□□ 0.24
LIMS3-203ENST00000480744 TEAD2Q15562 447 aa16.52■□□□□ 0.24
LIMS3-203ENST00000480744 RRAGBQ5VZM2 374 aa16.52■□□□□ 0.24
LIMS3-203ENST00000480744 C9orf57Q5W0N0 161 aa16.52■□□□□ 0.24
LIMS3-203ENST00000480744 SLFN12LQ6IEE8 588 aa16.52■□□□□ 0.24
LIMS3-203ENST00000480744 ARMCX5Q6P1M9 558 aa16.52■□□□□ 0.24
LIMS3-203ENST00000480744 LEMD2Q8NC56 503 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms