RNA–Protein interactions for RNA: ENST00000480737.1

FN1-221, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 384 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-221ENST00000480737 TLE1Q04724 770 aa4.09□□□□□ -1.75
FN1-221ENST00000480737 PTPRRQ15256 657 aa4.09□□□□□ -1.75
FN1-221ENST00000480737 SF3B3Q15393 1217 aaKnown RBP4.09□□□□□ -1.75
FN1-221ENST00000480737 CLNKQ7Z7G1 428 aa4.09□□□□□ -1.75
FN1-221ENST00000480737 DDX42Q86XP3 938 aaKnown RBP eCLIP4.09□□□□□ -1.75
FN1-221ENST00000480737 RHOT1Q8IXI2 618 aa4.09□□□□□ -1.75
FN1-221ENST00000480737 ATL2Q8NHH9 583 aa4.09□□□□□ -1.75
FN1-221ENST00000480737 HDAC10Q969S8 669 aa4.09□□□□□ -1.75
FN1-221ENST00000480737 SARAFQ96BY9 339 aa4.09□□□□□ -1.75
FN1-221ENST00000480737 TMX3Q96JJ7 454 aa4.09□□□□□ -1.75
FN1-221ENST00000480737 KLHL32Q96NJ5 620 aa4.09□□□□□ -1.75
FN1-221ENST00000480737 RSAD1Q9HA92 442 aa4.09□□□□□ -1.75
FN1-221ENST00000480737 TDP1Q9NUW8 608 aa4.09□□□□□ -1.75
FN1-221ENST00000480737 INTS13Q9NVM9 706 aa4.09□□□□□ -1.75
FN1-221ENST00000480737 SAP30BPQ9UHR5 308 aaKnown RBP4.09□□□□□ -1.75
FN1-221ENST00000480737 PCDHGA9Q9Y5G4 932 aaKnown RBP4.09□□□□□ -1.75
FN1-221ENST00000480737 PCDHGA8Q9Y5G5 932 aa4.09□□□□□ -1.75
FN1-221ENST00000480737 PCDHGA7Q9Y5G6 932 aa4.09□□□□□ -1.75
FN1-221ENST00000480737 PCDHGA6Q9Y5G7 932 aa4.09□□□□□ -1.75
FN1-221ENST00000480737 PCDHGA3Q9Y5H0 932 aa4.09□□□□□ -1.75
FN1-221ENST00000480737 RB1CC1Q8TDY2 1594 aa4.09□□□□□ -1.75
FN1-221ENST00000480737 LRRC3CA6NJW4 275 aa4.08□□□□□ -1.76
FN1-221ENST00000480737 CGB1A6NKQ9 187 aa4.08□□□□□ -1.76
FN1-221ENST00000480737 PEX1O43933 1283 aa4.08□□□□□ -1.76
FN1-221ENST00000480737 SUN1O94901 812 aa4.08□□□□□ -1.76
FN1-221ENST00000480737 AGFG2O95081 481 aa4.08□□□□□ -1.76
FN1-221ENST00000480737 COL3A1P02461 1466 aaPredicted RBP4.08□□□□□ -1.76
FN1-221ENST00000480737 ANXA1P04083 346 aa4.08□□□□□ -1.76
FN1-221ENST00000480737 MAPK10P53779 464 aa4.08□□□□□ -1.76
FN1-221ENST00000480737 SLC16A1P53985 500 aa4.08□□□□□ -1.76
FN1-221ENST00000480737 RPS7P62081 194 aaKnown RBP4.08□□□□□ -1.76
FN1-221ENST00000480737 DYRK1AQ13627 763 aa4.08□□□□□ -1.76
FN1-221ENST00000480737 HLXQ14774 488 aaPredicted RBP4.08□□□□□ -1.76
FN1-221ENST00000480737 GRASPQ7Z6J2 395 aaPredicted RBP4.08□□□□□ -1.76
FN1-221ENST00000480737 NSUN6Q8TEA1 469 aaKnown RBP4.08□□□□□ -1.76
FN1-221ENST00000480737 HEPHQ9BQS7 1158 aa4.08□□□□□ -1.76
FN1-221ENST00000480737 LIMCH1Q9UPQ0 1083 aa4.08□□□□□ -1.76
FN1-221ENST00000480737 ATP8A1Q9Y2Q0 1164 aa4.08□□□□□ -1.76
FN1-221ENST00000480737 ARHGEF17Q96PE2 2063 aaPredicted RBP4.07□□□□□ -1.76
FN1-221ENST00000480737 CCDC195A0A1B0GUA6 201 aa4.07□□□□□ -1.76
FN1-221ENST00000480737 YY2O15391 372 aa4.07□□□□□ -1.76
FN1-221ENST00000480737 EIF5BO60841 1220 aaKnown RBP4.07□□□□□ -1.76
FN1-221ENST00000480737 CDK4P11802 303 aa4.07□□□□□ -1.76
FN1-221ENST00000480737 LMO1P25800 156 aa4.07□□□□□ -1.76
FN1-221ENST00000480737 ITPKBP27987 946 aa4.07□□□□□ -1.76
FN1-221ENST00000480737 GRIA3P42263 894 aa4.07□□□□□ -1.76
FN1-221ENST00000480737 SOX10P56693 466 aa4.07□□□□□ -1.76
FN1-221ENST00000480737 TCF15Q12870 199 aa4.07□□□□□ -1.76
FN1-221ENST00000480737 C3orf36Q3SXR2 165 aa4.07□□□□□ -1.76
FN1-221ENST00000480737 UTP14CQ5TAP6 766 aaKnown RBP4.07□□□□□ -1.76
FN1-221ENST00000480737 SYDE2Q5VT97 1194 aa4.07□□□□□ -1.76
FN1-221ENST00000480737 ADGRG5Q8IZF4 528 aa4.07□□□□□ -1.76
FN1-221ENST00000480737 TMIEQ8NEW7 156 aa4.07□□□□□ -1.76
FN1-221ENST00000480737 FAXDC2Q96IV6 333 aa4.07□□□□□ -1.76
FN1-221ENST00000480737 LRIG1Q96JA1 1093 aa4.07□□□□□ -1.76
FN1-221ENST00000480737 KIAA1586Q9HCI6 787 aa4.07□□□□□ -1.76
FN1-221ENST00000480737 KMT5AQ9NQR1 393 aa4.07□□□□□ -1.76
FN1-221ENST00000480737 RLIMQ9NVW2 624 aa4.07□□□□□ -1.76
FN1-221ENST00000480737 PCDHB1Q9Y5F3 818 aa4.07□□□□□ -1.76
FN1-221ENST00000480737 SPATA31A3Q5VYP0 1347 aa4.06□□□□□ -1.76
FN1-221ENST00000480737 NT5C1B-RDH14C9J2C7 533 aa4.06□□□□□ -1.76
FN1-221ENST00000480737 E9PLN8 166 aa4.06□□□□□ -1.76
FN1-221ENST00000480737 CD1AP06126 327 aa4.06□□□□□ -1.76
FN1-221ENST00000480737 ELFN1P0C7U0 828 aa4.06□□□□□ -1.76
FN1-221ENST00000480737 GATA3P23771 443 aa4.06□□□□□ -1.76
FN1-221ENST00000480737 ZNF280AP59817 542 aaPredicted RBP4.06□□□□□ -1.76
FN1-221ENST00000480737 ZNF844Q08AG5 666 aa4.06□□□□□ -1.76
FN1-221ENST00000480737 TXNRD1Q16881 649 aa4.06□□□□□ -1.76
FN1-221ENST00000480737 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.06□□□□□ -1.76
FN1-221ENST00000480737 MICALCLQ6ZW33 695 aa4.06□□□□□ -1.76
FN1-221ENST00000480737 C1QL2Q7Z5L3 287 aa4.06□□□□□ -1.76
FN1-221ENST00000480737 PEG10Q86TG7 708 aaKnown RBP4.06□□□□□ -1.76
FN1-221ENST00000480737 RSPH3Q86UC2 560 aa4.06□□□□□ -1.76
FN1-221ENST00000480737 PDSS2Q86YH6 399 aa4.06□□□□□ -1.76
FN1-221ENST00000480737 CFAP52Q8N1V2 620 aa4.06□□□□□ -1.76
FN1-221ENST00000480737 SH2D3CQ8N5H7 860 aa4.06□□□□□ -1.76
FN1-221ENST00000480737 POC1BQ8TC44 478 aa4.06□□□□□ -1.76
FN1-221ENST00000480737 LPIN2Q92539 896 aa4.06□□□□□ -1.76
FN1-221ENST00000480737 TMEM125Q96AQ2 219 aa4.06□□□□□ -1.76
FN1-221ENST00000480737 COA7Q96BR5 231 aa4.06□□□□□ -1.76
FN1-221ENST00000480737 PGBD1Q96JS3 809 aa4.06□□□□□ -1.76
FN1-221ENST00000480737 TEKT5Q96M29 485 aa4.06□□□□□ -1.76
FN1-221ENST00000480737 VKORC1Q9BQB6 163 aa4.06□□□□□ -1.76
FN1-221ENST00000480737 PACSIN1Q9BY11 444 aa4.06□□□□□ -1.76
FN1-221ENST00000480737 SLC13A1Q9BZW2 595 aa4.06□□□□□ -1.76
FN1-221ENST00000480737 SIDT1Q9NXL6 827 aaKnown RBP4.06□□□□□ -1.76
FN1-221ENST00000480737 CDYLQ9Y232 598 aa4.06□□□□□ -1.76
FN1-221ENST00000480737 PCDHA13Q9Y5I0 950 aa4.06□□□□□ -1.76
FN1-221ENST00000480737 CFAP20Q9Y6A4 193 aaKnown RBP4.06□□□□□ -1.76
FN1-221ENST00000480737 SCRIBQ14160 1630 aa4.06□□□□□ -1.76
FN1-221ENST00000480737 KLHL33A6NCF5 533 aa4.05□□□□□ -1.76
FN1-221ENST00000480737 ADM5C9JUS6 153 aa4.05□□□□□ -1.76
FN1-221ENST00000480737 GABRDO14764 452 aa4.05□□□□□ -1.76
FN1-221ENST00000480737 ADKP55263 362 aaKnown RBP4.05□□□□□ -1.76
FN1-221ENST00000480737 MC2RQ01718 297 aa4.05□□□□□ -1.76
FN1-221ENST00000480737 DSC2Q02487 901 aa4.05□□□□□ -1.76
FN1-221ENST00000480737 PIGFQ07326 219 aa4.05□□□□□ -1.76
FN1-221ENST00000480737 MTMR1Q13613 665 aa4.05□□□□□ -1.76
FN1-221ENST00000480737 IL10RAQ13651 578 aa4.05□□□□□ -1.76
FN1-221ENST00000480737 PAPD7Q5XG87 772 aaKnown RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms