RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 GATMP50440 423 aa18.85■□□□□ 0.61
UPF3A-206ENST00000480362 CDK17Q00537 523 aa18.85■□□□□ 0.61
UPF3A-206ENST00000480362 FMNL3Q8IVF7 1028 aa18.85■□□□□ 0.61
UPF3A-206ENST00000480362 FAM71AQ8IYT1 594 aa18.85■□□□□ 0.61
UPF3A-206ENST00000480362 ABI1Q8IZP0 508 aa18.85■□□□□ 0.61
UPF3A-206ENST00000480362 FAXDC2Q96IV6 333 aa18.85■□□□□ 0.61
UPF3A-206ENST00000480362 ZNF560Q96MR9 790 aa18.85■□□□□ 0.61
UPF3A-206ENST00000480362 CACNG4Q9UBN1 327 aa18.85■□□□□ 0.61
UPF3A-206ENST00000480362 CASTOR2A6NHX0 329 aa18.84■□□□□ 0.61
UPF3A-206ENST00000480362 HOXA2O43364 376 aa18.84■□□□□ 0.61
UPF3A-206ENST00000480362 SERPING1P05155 500 aa18.84■□□□□ 0.61
UPF3A-206ENST00000480362 P4HA1P13674 534 aa18.84■□□□□ 0.61
UPF3A-206ENST00000480362 ACO1P21399 889 aaKnown RBP18.84■□□□□ 0.61
UPF3A-206ENST00000480362 PNPLA4P41247 253 aa18.84■□□□□ 0.61
UPF3A-206ENST00000480362 CLCNKBP51801 687 aa18.84■□□□□ 0.61
UPF3A-206ENST00000480362 TNNC1P63316 161 aa18.84■□□□□ 0.61
UPF3A-206ENST00000480362 FPGSQ05932 587 aa18.84■□□□□ 0.61
UPF3A-206ENST00000480362 KLHL30Q0D2K2 578 aa18.84■□□□□ 0.61
UPF3A-206ENST00000480362 PPIGQ13427 754 aaKnown RBP eCLIP18.84■□□□□ 0.61
UPF3A-206ENST00000480362 TUSC3Q13454 348 aa18.84■□□□□ 0.61
UPF3A-206ENST00000480362 HGSNATQ68CP4 663 aa18.84■□□□□ 0.61
UPF3A-206ENST00000480362 SCARA5Q6ZMJ2 495 aa18.84■□□□□ 0.61
UPF3A-206ENST00000480362 CASD1Q96PB1 797 aa18.84■□□□□ 0.61
UPF3A-206ENST00000480362 BCO2Q9BYV7 579 aa18.84■□□□□ 0.61
UPF3A-206ENST00000480362 TBC1D13Q9NVG8 400 aa18.84■□□□□ 0.61
UPF3A-206ENST00000480362 ARHGAP20Q9P2F6 1191 aa18.84■□□□□ 0.61
UPF3A-206ENST00000480362 PCDHB4Q9Y5E5 795 aa18.84■□□□□ 0.61
UPF3A-206ENST00000480362 MICAL3Q7RTP6 2002 aa18.84■□□□□ 0.61
UPF3A-206ENST00000480362 TTC3P53804 2025 aa18.83■□□□□ 0.61
UPF3A-206ENST00000480362 TDRD15B5MCY1 1934 aaKnown RBP18.83■□□□□ 0.6
UPF3A-206ENST00000480362 SOWAHDA6NJG2 315 aa18.83■□□□□ 0.6
UPF3A-206ENST00000480362 PODXLO00592 558 aa18.83■□□□□ 0.6
UPF3A-206ENST00000480362 SPTLC1O15269 473 aa18.83■□□□□ 0.6
UPF3A-206ENST00000480362 EFCAB14O75071 495 aa18.83■□□□□ 0.6
UPF3A-206ENST00000480362 DDHD2O94830 711 aa18.83■□□□□ 0.6
UPF3A-206ENST00000480362 UPP2O95045 317 aa18.83■□□□□ 0.6
UPF3A-206ENST00000480362 AMHP03971 560 aa18.83■□□□□ 0.6
UPF3A-206ENST00000480362 PLEKP08567 350 aaPredicted RBP18.83■□□□□ 0.6
UPF3A-206ENST00000480362 WEE2P0C1S8 567 aa18.83■□□□□ 0.6
UPF3A-206ENST00000480362 CCDC172P0C7W6 258 aa18.83■□□□□ 0.6
UPF3A-206ENST00000480362 KRT5P13647 590 aa18.83■□□□□ 0.6
UPF3A-206ENST00000480362 SYN1P17600 705 aa18.83■□□□□ 0.6
UPF3A-206ENST00000480362 PRKCIP41743 596 aa18.83■□□□□ 0.6
UPF3A-206ENST00000480362 TAF6P49848 677 aa18.83■□□□□ 0.6
UPF3A-206ENST00000480362 SV2CQ496J9 727 aa18.83■□□□□ 0.6
UPF3A-206ENST00000480362 C16orf59Q7L2K0 433 aa18.83■□□□□ 0.6
UPF3A-206ENST00000480362 ZNF280BQ86YH2 543 aa18.83■□□□□ 0.6
UPF3A-206ENST00000480362 UBR7Q8N806 425 aa18.83■□□□□ 0.6
UPF3A-206ENST00000480362 RABGGTAQ92696 567 aa18.83■□□□□ 0.6
UPF3A-206ENST00000480362 DDX27Q96GQ7 796 aaKnown RBP18.83■□□□□ 0.6
UPF3A-206ENST00000480362 MMS19Q96T76 1030 aa18.83■□□□□ 0.6
UPF3A-206ENST00000480362 PAAF1Q9BRP4 392 aa18.83■□□□□ 0.6
UPF3A-206ENST00000480362 SDCBP2Q9H190 292 aa18.83■□□□□ 0.6
UPF3A-206ENST00000480362 CYP3A43Q9HB55 503 aa18.83■□□□□ 0.6
UPF3A-206ENST00000480362 SNX9Q9Y5X1 595 aa18.83■□□□□ 0.6
UPF3A-206ENST00000480362 KPNA7A9QM74 516 aa18.82■□□□□ 0.6
UPF3A-206ENST00000480362 CYP26A1O43174 497 aa18.82■□□□□ 0.6
UPF3A-206ENST00000480362 ARHGAP6O43182 974 aa18.82■□□□□ 0.6
UPF3A-206ENST00000480362 FGBP02675 491 aa18.82■□□□□ 0.6
UPF3A-206ENST00000480362 CD58P19256 250 aa18.82■□□□□ 0.6
UPF3A-206ENST00000480362 IGFBP6P24592 240 aaPredicted RBP18.82■□□□□ 0.6
UPF3A-206ENST00000480362 CLCN1P35523 988 aa18.82■□□□□ 0.6
UPF3A-206ENST00000480362 EIF4A3P38919 411 aaKnown RBP18.82■□□□□ 0.6
UPF3A-206ENST00000480362 RAP1GAPP47736 663 aa18.82■□□□□ 0.6
UPF3A-206ENST00000480362 CDH8P55286 799 aa18.82■□□□□ 0.6
UPF3A-206ENST00000480362 LILRA4P59901 499 aa18.82■□□□□ 0.6
UPF3A-206ENST00000480362 YWHAEP62258 255 aaKnown RBP18.82■□□□□ 0.6
UPF3A-206ENST00000480362 RNASELQ05823 741 aaKnown RBP18.82■□□□□ 0.6
UPF3A-206ENST00000480362 MTF1Q14872 753 aa18.82■□□□□ 0.6
UPF3A-206ENST00000480362 UPP1Q16831 310 aa18.82■□□□□ 0.6
UPF3A-206ENST00000480362 TDRD12Q587J7 1177 aaKnown RBP18.82■□□□□ 0.6
UPF3A-206ENST00000480362 RAD9BQ6WBX8 426 aa18.82■□□□□ 0.6
UPF3A-206ENST00000480362 DPF3Q92784 378 aa18.82■□□□□ 0.6
UPF3A-206ENST00000480362 UROC1Q96N76 676 aa18.82■□□□□ 0.6
UPF3A-206ENST00000480362 FAM193BQ96PV7 902 aaPredicted RBP18.82■□□□□ 0.6
UPF3A-206ENST00000480362 HAUS4Q9H6D7 363 aa18.82■□□□□ 0.6
UPF3A-206ENST00000480362 SMYD3Q9H7B4 428 aa18.82■□□□□ 0.6
UPF3A-206ENST00000480362 NHEJ1Q9H9Q4 299 aaPredicted RBP18.82■□□□□ 0.6
UPF3A-206ENST00000480362 CISHQ9NSE2 258 aa18.82■□□□□ 0.6
UPF3A-206ENST00000480362 PYCARDQ9ULZ3 195 aa18.82■□□□□ 0.6
UPF3A-206ENST00000480362 BZW2Q9Y6E2 419 aaKnown RBP18.82■□□□□ 0.6
UPF3A-206ENST00000480362 SCN1AP35498 2009 aa18.82■□□□□ 0.6
UPF3A-206ENST00000480362 LTBP2Q14767 1821 aa18.81■□□□□ 0.6
UPF3A-206ENST00000480362 TBKBP1A7MCY6 615 aa18.81■□□□□ 0.6
UPF3A-206ENST00000480362 BAIAP3O94812 1187 aa18.81■□□□□ 0.6
UPF3A-206ENST00000480362 WDR5P61964 334 aaKnown RBP18.81■□□□□ 0.6
UPF3A-206ENST00000480362 DEFB103AP81534 67 aa18.81■□□□□ 0.6
UPF3A-206ENST00000480362 DSC1Q08554 894 aa18.81■□□□□ 0.6
UPF3A-206ENST00000480362 MAPK8IP2Q13387 824 aaPredicted RBP18.81■□□□□ 0.6
UPF3A-206ENST00000480362 TMEM270Q6UE05 265 aa18.81■□□□□ 0.6
UPF3A-206ENST00000480362 ZNF365Q70YC5 407 aa18.81■□□□□ 0.6
UPF3A-206ENST00000480362 OTOP2Q7RTS6 562 aa18.81■□□□□ 0.6
UPF3A-206ENST00000480362 COLGALT2Q8IYK4 626 aa18.81■□□□□ 0.6
UPF3A-206ENST00000480362 TOP1MTQ969P6 601 aa18.81■□□□□ 0.6
UPF3A-206ENST00000480362 CCDC42Q96M95 316 aa18.81■□□□□ 0.6
UPF3A-206ENST00000480362 GDAP2Q9NXN4 497 aa18.81■□□□□ 0.6
UPF3A-206ENST00000480362 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.81■□□□□ 0.6
UPF3A-206ENST00000480362 ZMYND8Q9ULU4 1186 aaPredicted RBP18.81■□□□□ 0.6
UPF3A-206ENST00000480362 CNTN6Q9UQ52 1028 aa18.81■□□□□ 0.6
UPF3A-206ENST00000480362 ZKSCAN5Q9Y2L8 839 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms