RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 STK39Q9UEW8 545 aa12.04□□□□□ -0.48
CLDN11-205ENST00000480067 SF3B1O75533 1304 aaKnown RBP eCLIP12.04□□□□□ -0.48
CLDN11-205ENST00000480067 COL4A6Q14031 1691 aa12.03□□□□□ -0.48
CLDN11-205ENST00000480067 FNDC1Q4ZHG4 1894 aaPredicted RBP12.03□□□□□ -0.48
CLDN11-205ENST00000480067 PTPRSQ13332 1948 aa12.03□□□□□ -0.48
CLDN11-205ENST00000480067 GTPBP10A4D1E9 387 aaKnown RBP12.03□□□□□ -0.48
CLDN11-205ENST00000480067 LGALS16A8MUM7 142 aa12.03□□□□□ -0.48
CLDN11-205ENST00000480067 C5orf67F2Z3F1 127 aa12.03□□□□□ -0.48
CLDN11-205ENST00000480067 SPTLC1O15269 473 aa12.03□□□□□ -0.48
CLDN11-205ENST00000480067 ASS1P00966 412 aaKnown RBP12.03□□□□□ -0.48
CLDN11-205ENST00000480067 P4HA1P13674 534 aa12.03□□□□□ -0.48
CLDN11-205ENST00000480067 UBASH3AP57075 661 aa12.03□□□□□ -0.48
CLDN11-205ENST00000480067 PLCB3Q01970 1234 aa12.03□□□□□ -0.48
CLDN11-205ENST00000480067 ELAVL2Q12926 359 aaKnown RBP12.03□□□□□ -0.48
CLDN11-205ENST00000480067 TIGD5Q53EQ6 642 aa12.03□□□□□ -0.48
CLDN11-205ENST00000480067 EHBP1Q8NDI1 1231 aa12.03□□□□□ -0.48
CLDN11-205ENST00000480067 ARNTL2Q8WYA1 636 aa12.03□□□□□ -0.48
CLDN11-205ENST00000480067 SEMA4DQ92854 862 aa12.03□□□□□ -0.48
CLDN11-205ENST00000480067 MMS19Q96T76 1030 aa12.03□□□□□ -0.48
CLDN11-205ENST00000480067 PI4K2AQ9BTU6 479 aa12.03□□□□□ -0.48
CLDN11-205ENST00000480067 XYLT2Q9H1B5 865 aa12.03□□□□□ -0.48
CLDN11-205ENST00000480067 CERS4Q9HA82 394 aa12.03□□□□□ -0.48
CLDN11-205ENST00000480067 GCNT4Q9P109 453 aa12.03□□□□□ -0.48
CLDN11-205ENST00000480067 NXF1Q9UBU9 619 aaKnown RBP12.03□□□□□ -0.48
CLDN11-205ENST00000480067 SNX9Q9Y5X1 595 aa12.03□□□□□ -0.48
CLDN11-205ENST00000480067 ARHGEF37A1IGU5 675 aa12.02□□□□□ -0.49
CLDN11-205ENST00000480067 I3L4J1 428 aa12.02□□□□□ -0.49
CLDN11-205ENST00000480067 HUS1O60921 280 aa12.02□□□□□ -0.49
CLDN11-205ENST00000480067 STAU1O95793 577 aaKnown RBP12.02□□□□□ -0.49
CLDN11-205ENST00000480067 TPM3P06753 285 aa12.02□□□□□ -0.49
CLDN11-205ENST00000480067 BRCC3P46736 316 aa12.02□□□□□ -0.49
CLDN11-205ENST00000480067 AARSP49588 968 aaKnown RBP eCLIP12.02□□□□□ -0.49
CLDN11-205ENST00000480067 TNNC1P63316 161 aa12.02□□□□□ -0.49
CLDN11-205ENST00000480067 ZNF667Q5HYK9 610 aa12.02□□□□□ -0.49
CLDN11-205ENST00000480067 FAM171A1Q5VUB5 890 aa12.02□□□□□ -0.49
CLDN11-205ENST00000480067 KIAA1841Q6NSI8 718 aa12.02□□□□□ -0.49
CLDN11-205ENST00000480067 FUT10Q6P4F1 479 aa12.02□□□□□ -0.49
CLDN11-205ENST00000480067 CD300LGQ6UXG3 332 aa12.02□□□□□ -0.49
CLDN11-205ENST00000480067 DDX53Q86TM3 631 aaKnown RBP12.02□□□□□ -0.49
CLDN11-205ENST00000480067 FBXO22Q8NEZ5 403 aa12.02□□□□□ -0.49
CLDN11-205ENST00000480067 BCL7CQ8WUZ0 217 aaPredicted RBP12.02□□□□□ -0.49
CLDN11-205ENST00000480067 SENP8Q96LD8 212 aa12.02□□□□□ -0.49
CLDN11-205ENST00000480067 NAP1L5Q96NT1 182 aaPredicted RBP12.02□□□□□ -0.49
CLDN11-205ENST00000480067 GPR62Q9BZJ7 368 aa12.02□□□□□ -0.49
CLDN11-205ENST00000480067 VRTNQ9H8Y1 702 aa12.02□□□□□ -0.49
CLDN11-205ENST00000480067 ALG13Q9NP73 1137 aaKnown RBP12.02□□□□□ -0.49
CLDN11-205ENST00000480067 RTN4Q9NQC3 1192 aaKnown RBP12.02□□□□□ -0.49
CLDN11-205ENST00000480067 GDAP2Q9NXN4 497 aa12.02□□□□□ -0.49
CLDN11-205ENST00000480067 SZT2Q5T011 3432 aa12.02□□□□□ -0.49
CLDN11-205ENST00000480067 TRIP11Q15643 1979 aa12.02□□□□□ -0.49
CLDN11-205ENST00000480067 TRANK1O15050 2925 aa12.02□□□□□ -0.49
CLDN11-205ENST00000480067 A0A1B0GTH6 734 aa12.01□□□□□ -0.49
CLDN11-205ENST00000480067 CYB561D2O14569 222 aa12.01□□□□□ -0.49
CLDN11-205ENST00000480067 LRRN2O75325 713 aa12.01□□□□□ -0.49
CLDN11-205ENST00000480067 PON1P27169 355 aa12.01□□□□□ -0.49
CLDN11-205ENST00000480067 NOP14P78316 857 aaKnown RBP12.01□□□□□ -0.49
CLDN11-205ENST00000480067 LRMPQ12912 555 aa12.01□□□□□ -0.49
CLDN11-205ENST00000480067 BMS1Q14692 1282 aaKnown RBP12.01□□□□□ -0.49
CLDN11-205ENST00000480067 NR1I3Q14994 352 aa12.01□□□□□ -0.49
CLDN11-205ENST00000480067 UVSSAQ2YD98 709 aa12.01□□□□□ -0.49
CLDN11-205ENST00000480067 SPOPLQ6IQ16 392 aa12.01□□□□□ -0.49
CLDN11-205ENST00000480067 SPRED2Q7Z698 418 aa12.01□□□□□ -0.49
CLDN11-205ENST00000480067 CEP57Q86XR8 500 aa12.01□□□□□ -0.49
CLDN11-205ENST00000480067 VPS52Q8N1B4 723 aa12.01□□□□□ -0.49
CLDN11-205ENST00000480067 APPL2Q8NEU8 664 aa12.01□□□□□ -0.49
CLDN11-205ENST00000480067 ELMO3Q96BJ8 720 aa12.01□□□□□ -0.49
CLDN11-205ENST00000480067 SUSD3Q96L08 255 aa12.01□□□□□ -0.49
CLDN11-205ENST00000480067 PCMTD1Q96MG8 357 aaPredicted RBP12.01□□□□□ -0.49
CLDN11-205ENST00000480067 NT5C1BQ96P26 610 aa12.01□□□□□ -0.49
CLDN11-205ENST00000480067 INTS2Q9H0H0 1204 aaKnown RBP12.01□□□□□ -0.49
CLDN11-205ENST00000480067 ZNF576Q9H609 170 aa12.01□□□□□ -0.49
CLDN11-205ENST00000480067 IFNKQ9P0W0 207 aa12.01□□□□□ -0.49
CLDN11-205ENST00000480067 RALGAPA2Q2PPJ7 1873 aa12.01□□□□□ -0.49
CLDN11-205ENST00000480067 TDRD15B5MCY1 1934 aaKnown RBP12.01□□□□□ -0.49
CLDN11-205ENST00000480067 ANK1P16157 1881 aa12.01□□□□□ -0.49
CLDN11-205ENST00000480067 H3BNC9 293 aa12.01□□□□□ -0.49
CLDN11-205ENST00000480067 M0QZQ0 153 aa12.01□□□□□ -0.49
CLDN11-205ENST00000480067 CBFA2T2O43439 604 aa12.01□□□□□ -0.49
CLDN11-205ENST00000480067 ODC1P11926 461 aa12.01□□□□□ -0.49
CLDN11-205ENST00000480067 SLC9A1P19634 815 aa12.01□□□□□ -0.49
CLDN11-205ENST00000480067 UBE3AQ05086 875 aa12.01□□□□□ -0.49
CLDN11-205ENST00000480067 GPM6BQ13491 265 aa12.01□□□□□ -0.49
CLDN11-205ENST00000480067 USP41Q3LFD5 358 aa12.01□□□□□ -0.49
CLDN11-205ENST00000480067 TRIM65Q6PJ69 517 aa12.01□□□□□ -0.49
CLDN11-205ENST00000480067 TAS1R1Q7RTX1 841 aa12.01□□□□□ -0.49
CLDN11-205ENST00000480067 METTL23Q86XA0 190 aa12.01□□□□□ -0.49
CLDN11-205ENST00000480067 LMO3Q8TAP4 145 aa12.01□□□□□ -0.49
CLDN11-205ENST00000480067 SPPL3Q8TCT6 385 aa12.01□□□□□ -0.49
CLDN11-205ENST00000480067 TTPALQ9BTX7 342 aa12.01□□□□□ -0.49
CLDN11-205ENST00000480067 APOBEC3GQ9HC16 384 aaKnown RBP12.01□□□□□ -0.49
CLDN11-205ENST00000480067 DSEQ9UL01 958 aa12.01□□□□□ -0.49
CLDN11-205ENST00000480067 PCDHB8Q9UN66 801 aa12.01□□□□□ -0.49
CLDN11-205ENST00000480067 LZTS1Q9Y250 596 aa12.01□□□□□ -0.49
CLDN11-205ENST00000480067 SYN3O14994 580 aa12□□□□□ -0.49
CLDN11-205ENST00000480067 TEX33O43247 280 aa12□□□□□ -0.49
CLDN11-205ENST00000480067 SOD2P04179 222 aa12□□□□□ -0.49
CLDN11-205ENST00000480067 FGFR3P22607 806 aa12□□□□□ -0.49
CLDN11-205ENST00000480067 KCNMA1Q12791 1236 aa12□□□□□ -0.49
CLDN11-205ENST00000480067 SYCP1Q15431 976 aa12□□□□□ -0.49
CLDN11-205ENST00000480067 SOWAHAQ2M3V2 549 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms