RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 U2AF1L4Q8WU68 220 aaKnown RBP13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 WDR60Q8WVS4 1066 aa13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 NRG4Q8WWG1 115 aa13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 ESR2Q92731 530 aa13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 SLC35B4Q969S0 331 aa13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 ZKSCAN3Q9BRR0 538 aa13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 NT5C3AQ9H0P0 336 aa13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 MKNK2Q9HBH9 465 aa13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 ZNF287Q9HBT7 754 aa13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 TBCCD1Q9NVR7 557 aa13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 DBR1Q9UK59 544 aaKnown RBP13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 DOCK3Q8IZD9 2030 aa13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 A8MXQ7 604 aa13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 DDAH1O94760 285 aa13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 SGPL1O95470 568 aa13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 TTLL1O95922 423 aa13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 T-ENOLP0DO92 83 aa13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 FCER1AP12319 257 aa13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 VAV1P15498 845 aa13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 TAC1P20366 129 aa13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 CYP2B6P20813 491 aa13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 DSG3P32926 999 aa13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 KBTBD12Q3ZCT8 623 aa13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 GALNT17Q6IS24 598 aa13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 TSHZ1Q6ZSZ6 1077 aa13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 CCDC80Q76M96 950 aa13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 ALDH16A1Q8IZ83 802 aa13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 ANKRD42Q8N9B4 389 aa13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 HAUS1Q96CS2 278 aa13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 KCNK9Q9NPC2 374 aa13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 DDX25Q9UHL0 483 aaKnown RBP13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 TACC3Q9Y6A5 838 aa13.95□□□□□ -0.18
CNKSR3-204ENST00000479339 GREB1LQ9C091 1923 aaPredicted RBP13.94□□□□□ -0.18
CNKSR3-204ENST00000479339 TNKSO95271 1327 aa13.94□□□□□ -0.18
CNKSR3-204ENST00000479339 CNTNAP5Q8WYK1 1306 aa13.94□□□□□ -0.18
CNKSR3-204ENST00000479339 IGKV6D-41A0A0C4DH26 115 aa13.94□□□□□ -0.18
CNKSR3-204ENST00000479339 SLC15A5A6NIM6 579 aa13.94□□□□□ -0.18
CNKSR3-204ENST00000479339 DDX3XO00571 662 aaKnown RBP eCLIP13.94□□□□□ -0.18
CNKSR3-204ENST00000479339 CCDC22O60826 627 aa13.94□□□□□ -0.18
CNKSR3-204ENST00000479339 PHF2O75151 1096 aa13.94□□□□□ -0.18
CNKSR3-204ENST00000479339 TCEA3O75764 348 aa13.94□□□□□ -0.18
CNKSR3-204ENST00000479339 PIM1P11309 404 aaPredicted RBP13.94□□□□□ -0.18
CNKSR3-204ENST00000479339 BRAFP15056 766 aa13.94□□□□□ -0.18
CNKSR3-204ENST00000479339 CPA3P15088 417 aa13.94□□□□□ -0.18
CNKSR3-204ENST00000479339 SLC45A4Q5BKX6 768 aa13.94□□□□□ -0.18
CNKSR3-204ENST00000479339 TMTC3Q6ZXV5 915 aa13.94□□□□□ -0.18
CNKSR3-204ENST00000479339 CYFIP1Q7L576 1253 aa13.94□□□□□ -0.18
CNKSR3-204ENST00000479339 VPS36Q86VN1 386 aa13.94□□□□□ -0.18
CNKSR3-204ENST00000479339 ZNF398Q8TD17 642 aa13.94□□□□□ -0.18
CNKSR3-204ENST00000479339 TRIB2Q92519 343 aa13.94□□□□□ -0.18
CNKSR3-204ENST00000479339 TCP11L1Q9NUJ3 509 aa13.94□□□□□ -0.18
CNKSR3-204ENST00000479339 NYAP2Q9P242 653 aa13.94□□□□□ -0.18
CNKSR3-204ENST00000479339 ARMCX3Q9UH62 379 aaPredicted RBP13.94□□□□□ -0.18
CNKSR3-204ENST00000479339 ZNF148Q9UQR1 794 aa13.94□□□□□ -0.18
CNKSR3-204ENST00000479339 SNX24Q9Y343 169 aa13.94□□□□□ -0.18
CNKSR3-204ENST00000479339 COL4A3BPQ9Y5P4 624 aa13.94□□□□□ -0.18
CNKSR3-204ENST00000479339 PFASO15067 1338 aa13.94□□□□□ -0.18
CNKSR3-204ENST00000479339 A0A0J9YVX5 310 aa13.93□□□□□ -0.18
CNKSR3-204ENST00000479339 SCG2P13521 617 aa13.93□□□□□ -0.18
CNKSR3-204ENST00000479339 PLCG1P19174 1290 aa13.93□□□□□ -0.18
CNKSR3-204ENST00000479339 CD97P48960 835 aa13.93□□□□□ -0.18
CNKSR3-204ENST00000479339 DSG1Q02413 1049 aa13.93□□□□□ -0.18
CNKSR3-204ENST00000479339 MAP2K5Q13163 448 aa13.93□□□□□ -0.18
CNKSR3-204ENST00000479339 WDR72Q3MJ13 1102 aa13.93□□□□□ -0.18
CNKSR3-204ENST00000479339 ZNF568Q3ZCX4 644 aa13.93□□□□□ -0.18
CNKSR3-204ENST00000479339 MAP3K21Q5TCX8 1036 aa13.93□□□□□ -0.18
CNKSR3-204ENST00000479339 CABP7Q86V35 215 aa13.93□□□□□ -0.18
CNKSR3-204ENST00000479339 FAM133AQ8N9E0 248 aa13.93□□□□□ -0.18
CNKSR3-204ENST00000479339 GDAP1Q8TB36 358 aa13.93□□□□□ -0.18
CNKSR3-204ENST00000479339 APBA2Q99767 749 aa13.93□□□□□ -0.18
CNKSR3-204ENST00000479339 CRISPLD2Q9H0B8 497 aa13.93□□□□□ -0.18
CNKSR3-204ENST00000479339 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.93□□□□□ -0.183e-11■■■■■ 34.2
CNKSR3-204ENST00000479339 TIMMDC1Q9NPL8 285 aa13.93□□□□□ -0.18
CNKSR3-204ENST00000479339 DNAJB4Q9UDY4 337 aa13.93□□□□□ -0.18
CNKSR3-204ENST00000479339 SUN2Q9UH99 717 aa13.93□□□□□ -0.18
CNKSR3-204ENST00000479339 PCYOX1Q9UHG3 505 aa13.93□□□□□ -0.18
CNKSR3-204ENST00000479339 NAGPAQ9UK23 515 aa13.93□□□□□ -0.18
CNKSR3-204ENST00000479339 BARX2Q9UMQ3 279 aaPredicted RBP13.93□□□□□ -0.18
CNKSR3-204ENST00000479339 NENFQ9UMX5 172 aa13.93□□□□□ -0.18
CNKSR3-204ENST00000479339 HNRNPCP07910 306 aaKnown RBP eCLIP13.93□□□□□ -0.185e-7■■■■□ 21.2
CNKSR3-204ENST00000479339 H2AFZP0C0S5 128 aa13.93□□□□□ -0.18
CNKSR3-204ENST00000479339 UBTFL6P0CB48 400 aaPredicted RBP13.93□□□□□ -0.18
CNKSR3-204ENST00000479339 FGFR4P22455 802 aa13.93□□□□□ -0.18
CNKSR3-204ENST00000479339 PRKCIP41743 596 aa13.93□□□□□ -0.18
CNKSR3-204ENST00000479339 SERPINB8P50452 374 aa13.93□□□□□ -0.18
CNKSR3-204ENST00000479339 TRIM32Q13049 653 aa13.93□□□□□ -0.18
CNKSR3-204ENST00000479339 ZCWPW2Q504Y3 356 aa13.93□□□□□ -0.18
CNKSR3-204ENST00000479339 ZC2HC1CQ53FD0 456 aaPredicted RBP13.93□□□□□ -0.18
CNKSR3-204ENST00000479339 ALKBH5Q6P6C2 394 aaKnown RBP13.93□□□□□ -0.18
CNKSR3-204ENST00000479339 H2AFVQ71UI9 128 aa13.93□□□□□ -0.18
CNKSR3-204ENST00000479339 GPIHBP1Q8IV16 184 aa13.93□□□□□ -0.18
CNKSR3-204ENST00000479339 ARHGAP24Q8N264 748 aa13.93□□□□□ -0.18
CNKSR3-204ENST00000479339 SHCBP1Q8NEM2 672 aa13.93□□□□□ -0.18
CNKSR3-204ENST00000479339 PIP4K2CQ8TBX8 421 aa13.93□□□□□ -0.18
CNKSR3-204ENST00000479339 CEP63Q96MT8 703 aa13.93□□□□□ -0.18
CNKSR3-204ENST00000479339 DEFB118Q96PH6 123 aa13.93□□□□□ -0.18
CNKSR3-204ENST00000479339 ETNK2Q9NVF9 386 aa13.93□□□□□ -0.18
CNKSR3-204ENST00000479339 HSFX1Q9UBD0 423 aa13.93□□□□□ -0.18
CNKSR3-204ENST00000479339 LGALS13Q9UHV8 139 aa13.93□□□□□ -0.18
CNKSR3-204ENST00000479339 CHMP2BQ9UQN3 213 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms