RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 FBXO46Q6PJ61 603 aaPredicted RBP6.46□□□□□ -1.38
CCDC171-207ENST00000478913 POLNQ7Z5Q5 900 aa6.46□□□□□ -1.38
CCDC171-207ENST00000478913 PQLC1Q8N2U9 271 aa6.46□□□□□ -1.38
CCDC171-207ENST00000478913 OR2I1PQ8NGU4 316 aa6.46□□□□□ -1.38
CCDC171-207ENST00000478913 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.46□□□□□ -1.38
CCDC171-207ENST00000478913 NUP88Q99567 741 aaPredicted RBP6.46□□□□□ -1.38
CCDC171-207ENST00000478913 ENKD1Q9H0I2 346 aa6.46□□□□□ -1.38
CCDC171-207ENST00000478913 THSD7BQ9C0I4 1608 aa6.46□□□□□ -1.38
CCDC171-207ENST00000478913 CCDC18Q5T9S5 1454 aa6.46□□□□□ -1.38
CCDC171-207ENST00000478913 PRUNE2Q8WUY3 3088 aa6.46□□□□□ -1.38
CCDC171-207ENST00000478913 ZFHX4Q86UP3 3567 aa6.46□□□□□ -1.38
CCDC171-207ENST00000478913 EYSQ5T1H1 3165 aa6.45□□□□□ -1.38
CCDC171-207ENST00000478913 PARP4Q9UKK3 1724 aaKnown RBP6.45□□□□□ -1.38
CCDC171-207ENST00000478913 CCDC154A6NI56 674 aa6.45□□□□□ -1.38
CCDC171-207ENST00000478913 HTRA2O43464 458 aaPredicted RBP6.45□□□□□ -1.38
CCDC171-207ENST00000478913 DTNBO60941 627 aa6.45□□□□□ -1.38
CCDC171-207ENST00000478913 PTPN7P35236 360 aa6.45□□□□□ -1.38
CCDC171-207ENST00000478913 SREBF1P36956 1147 aa6.45□□□□□ -1.38
CCDC171-207ENST00000478913 APBA1Q02410 837 aa6.45□□□□□ -1.38
CCDC171-207ENST00000478913 CST9Q5W186 159 aa6.45□□□□□ -1.38
CCDC171-207ENST00000478913 RHOT1Q8IXI2 618 aa6.45□□□□□ -1.38
CCDC171-207ENST00000478913 TRMT2AQ8IZ69 625 aaKnown RBP6.45□□□□□ -1.38
CCDC171-207ENST00000478913 D2HGDHQ8N465 521 aa6.45□□□□□ -1.38
CCDC171-207ENST00000478913 MDM1Q8TC05 714 aa6.45□□□□□ -1.38
CCDC171-207ENST00000478913 RELTQ969Z4 430 aa6.45□□□□□ -1.38
CCDC171-207ENST00000478913 LOXL4Q96JB6 756 aa6.45□□□□□ -1.38
CCDC171-207ENST00000478913 LRFN3Q9BTN0 628 aa6.45□□□□□ -1.38
CCDC171-207ENST00000478913 C1QTNF1Q9BXJ1 281 aa6.45□□□□□ -1.38
CCDC171-207ENST00000478913 SENP6Q9GZR1 1112 aaPredicted RBP6.45□□□□□ -1.38
CCDC171-207ENST00000478913 MANSC1Q9H8J5 431 aa6.45□□□□□ -1.38
CCDC171-207ENST00000478913 LANCL2Q9NS86 450 aa6.45□□□□□ -1.38
CCDC171-207ENST00000478913 RNF186Q9NXI6 227 aa6.45□□□□□ -1.38
CCDC171-207ENST00000478913 CCNL1Q9UK58 526 aaPredicted RBP6.45□□□□□ -1.38
CCDC171-207ENST00000478913 PNMA8BQ9ULN7 279 aaPredicted RBP6.45□□□□□ -1.38
CCDC171-207ENST00000478913 LIMCH1Q9UPQ0 1083 aa6.45□□□□□ -1.38
CCDC171-207ENST00000478913 IPPQ9Y573 584 aa6.45□□□□□ -1.38
CCDC171-207ENST00000478913 KANK1Q14678 1352 aa6.44□□□□□ -1.38
CCDC171-207ENST00000478913 ATRXP46100 2492 aa6.44□□□□□ -1.38
CCDC171-207ENST00000478913 PATE3B3GLJ2 98 aa6.44□□□□□ -1.38
CCDC171-207ENST00000478913 K7ESM1 405 aa6.44□□□□□ -1.38
CCDC171-207ENST00000478913 RFPL1O75677 317 aa6.44□□□□□ -1.38
CCDC171-207ENST00000478913 STC2O76061 302 aa6.44□□□□□ -1.38
CCDC171-207ENST00000478913 MMP10P09238 476 aa6.44□□□□□ -1.38
CCDC171-207ENST00000478913 FOXL1Q12952 345 aa6.44□□□□□ -1.38
CCDC171-207ENST00000478913 MRPL49Q13405 166 aaKnown RBP6.44□□□□□ -1.38
CCDC171-207ENST00000478913 LRRC41Q15345 812 aa6.44□□□□□ -1.38
CCDC171-207ENST00000478913 C3orf36Q3SXR2 165 aa6.44□□□□□ -1.38
CCDC171-207ENST00000478913 RRP12Q5JTH9 1297 aaKnown RBP6.44□□□□□ -1.38
CCDC171-207ENST00000478913 PRAMEF14Q5SWL7 426 aa6.44□□□□□ -1.38
CCDC171-207ENST00000478913 FKBP15Q5T1M5 1219 aa6.44□□□□□ -1.38
CCDC171-207ENST00000478913 PPP4R3AQ6IN85 833 aa6.44□□□□□ -1.38
CCDC171-207ENST00000478913 MFSD5Q6N075 450 aa6.44□□□□□ -1.38
CCDC171-207ENST00000478913 TOM1L2Q6ZVM7 507 aa6.44□□□□□ -1.38
CCDC171-207ENST00000478913 CHPFQ8IZ52 775 aa6.44□□□□□ -1.38
CCDC171-207ENST00000478913 REPS2Q8NFH8 660 aa6.44□□□□□ -1.38
CCDC171-207ENST00000478913 ZNF512Q96ME7 567 aaPredicted RBP6.44□□□□□ -1.38
CCDC171-207ENST00000478913 MPHOSPH9Q99550 1183 aa6.44□□□□□ -1.38
CCDC171-207ENST00000478913 PDCD2LQ9BRP1 358 aa6.44□□□□□ -1.38
CCDC171-207ENST00000478913 NAIPQ13075 1403 aa6.43□□□□□ -1.38
CCDC171-207ENST00000478913 CCDC141Q6ZP82 1450 aa6.43□□□□□ -1.38
CCDC171-207ENST00000478913 QSER1Q2KHR3 1735 aa6.43□□□□□ -1.38
CCDC171-207ENST00000478913 ZNF623O75123 536 aa6.43□□□□□ -1.38
CCDC171-207ENST00000478913 SYN1P17600 705 aa6.43□□□□□ -1.38
CCDC171-207ENST00000478913 COMTP21964 271 aa6.43□□□□□ -1.38
CCDC171-207ENST00000478913 EDNRBP24530 442 aa6.43□□□□□ -1.38
CCDC171-207ENST00000478913 AKAP5P24588 427 aa6.43□□□□□ -1.38
CCDC171-207ENST00000478913 CYP2C19P33261 490 aa6.43□□□□□ -1.38
CCDC171-207ENST00000478913 SLC6A9P48067 706 aa6.43□□□□□ -1.38
CCDC171-207ENST00000478913 HHEXQ03014 270 aa6.43□□□□□ -1.38
CCDC171-207ENST00000478913 ICAM4Q14773 271 aa6.43□□□□□ -1.38
CCDC171-207ENST00000478913 FAM214AQ32MH5 1076 aa6.43□□□□□ -1.38
CCDC171-207ENST00000478913 HS1BP3Q53T59 392 aa6.43□□□□□ -1.38
CCDC171-207ENST00000478913 TPH2Q8IWU9 490 aa6.43□□□□□ -1.38
CCDC171-207ENST00000478913 DNERQ8NFT8 737 aa6.43□□□□□ -1.38
CCDC171-207ENST00000478913 FBXO18Q8NFZ0 1043 aa6.43□□□□□ -1.38
CCDC171-207ENST00000478913 CCHCR1Q8TD31 782 aa6.43□□□□□ -1.38
CCDC171-207ENST00000478913 CYFIP2Q96F07 1278 aa6.43□□□□□ -1.38
CCDC171-207ENST00000478913 SAMD11Q96NU1 681 aa6.43□□□□□ -1.38
CCDC171-207ENST00000478913 LDAHQ9H6V9 325 aa6.43□□□□□ -1.38
CCDC171-207ENST00000478913 TDP1Q9NUW8 608 aa6.43□□□□□ -1.38
CCDC171-207ENST00000478913 TMEM140Q9NV12 185 aa6.43□□□□□ -1.38
CCDC171-207ENST00000478913 SAGE1Q9NXZ1 904 aa6.43□□□□□ -1.38
CCDC171-207ENST00000478913 CNOT11Q9UKZ1 510 aaKnown RBP6.43□□□□□ -1.38
CCDC171-207ENST00000478913 SIK3Q9Y2K2 1263 aa6.43□□□□□ -1.38
CCDC171-207ENST00000478913 PCDHA13Q9Y5I0 950 aa6.43□□□□□ -1.38
CCDC171-207ENST00000478913 KIF7Q2M1P5 1343 aa6.43□□□□□ -1.38
CCDC171-207ENST00000478913 MYO5BQ9ULV0 1848 aa6.43□□□□□ -1.38
CCDC171-207ENST00000478913 EIF2AK4Q9P2K8 1649 aaKnown RBP6.43□□□□□ -1.38
CCDC171-207ENST00000478913 TUBGCP6Q96RT7 1819 aa6.42□□□□□ -1.38
CCDC171-207ENST00000478913 A0A1W2PPC1 479 aa6.42□□□□□ -1.38
CCDC171-207ENST00000478913 HOXA3O43365 443 aaPredicted RBP6.42□□□□□ -1.38
CCDC171-207ENST00000478913 TSPAN6O43657 245 aa6.42□□□□□ -1.38
CCDC171-207ENST00000478913 FOXD2O60548 495 aaPredicted RBP6.42□□□□□ -1.38
CCDC171-207ENST00000478913 GPR32O75388 356 aa6.42□□□□□ -1.38
CCDC171-207ENST00000478913 RPLP2P05387 115 aaKnown RBP6.42□□□□□ -1.38
CCDC171-207ENST00000478913 IL2RBP14784 551 aa6.42□□□□□ -1.38
CCDC171-207ENST00000478913 GNAT2P19087 354 aa6.42□□□□□ -1.38
CCDC171-207ENST00000478913 PDCP20941 246 aa6.42□□□□□ -1.38
CCDC171-207ENST00000478913 FLT3LGP49771 235 aa6.42□□□□□ -1.38
CCDC171-207ENST00000478913 IL10RAQ13651 578 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms