RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 HPF1Q9NWY4 346 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 PPP1R14DQ9NXH3 145 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 NSMCE4AQ9NXX6 385 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 CEP72Q9P209 647 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 MTRRQ9UBK8 725 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 EXTL2Q9UBQ6 330 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 ZNF180Q9UJW8 692 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 NOB1Q9ULX3 412 aaKnown RBP3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 MAPRE3Q9UPY8 281 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 SSX2IPQ9Y2D8 614 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 MAPKBP1O60336 1514 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 SPAG9O60271 1321 aaKnown RBP3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 KDRP35968 1356 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 SYNDIG1LA6NDD5 238 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 PRAMEF25A6NGN4 478 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 FAM90A27PA6NNH2 459 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 A8MVJ9 347 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 ACOT7O00154 380 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 CBX4O00257 560 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 FFAR3O14843 346 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 ZSCAN9O15535 394 aaPredicted RBP3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 NMT2O60551 498 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 CYP7B1O75881 506 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 SLITRK3O94933 977 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 FGFR1OPO95684 399 aaKnown RBP3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 ENO2P09104 434 aaPredicted RBP3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 HSPA1AP0DMV8 641 aaKnown RBP3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 HSPA1BP0DMV9 641 aaKnown RBP3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 ZSCAN22P10073 491 aaPredicted RBP3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 FERP16591 822 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 POU3F2P20265 443 aaPredicted RBP3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 THBS2P35442 1172 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 KRT20P35900 424 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 GRK6P43250 576 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 MECP2P51608 486 aaKnown RBP3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 ALDH5A1P51649 535 aaPredicted RBP3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 NEK4P51957 841 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 GTF2A1P52655 376 aaPredicted RBP3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 RWDD2BP57060 319 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 HERVK_113P62684 666 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 JAG1P78504 1218 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 IRF9Q00978 393 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 AKAP17AQ02040 695 aaKnown RBP3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 CCDC173Q0VFZ6 552 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 DBPQ10586 325 aaPredicted RBP3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 ADAM9Q13443 819 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 TCIRG1Q13488 830 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 SEMA3AQ14563 771 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 ANKRD1Q15327 319 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 PROSER3Q2NL68 480 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 KRT71Q3SY84 523 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 TUBB8Q3ZCM7 444 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 KRBOX4Q5JUW0 171 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 GPATCH4Q5T3I0 446 aaKnown RBP3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 GPR158Q5T848 1215 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 CD276Q5ZPR3 534 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 CPZQ66K79 652 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 XRRA1Q6P2D8 792 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 CNNM4Q6P4Q7 775 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 MTHFD1LQ6UB35 978 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 TMC5Q6UXY8 1006 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 TTLL7Q6ZT98 887 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 BTN2A1Q7KYR7 527 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 OTOP1Q7RTM1 612 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 ZER1Q7Z7L7 766 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 DZIP1Q86YF9 867 aaKnown RBP3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 SIAH1Q8IUQ4 282 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 EPHX4Q8IUS5 362 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 NOSTRINQ8IVI9 506 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 CCDC65Q8IXS2 484 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 TBC1D21Q8IYX1 336 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 ZNF619Q8N2I2 560 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 ZNF540Q8NDQ6 660 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 ERMNQ8TAM6 284 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 FBXO30Q8TB52 745 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 DDX1Q92499 740 aaKnown RBP3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 TNPO1Q92973 898 aaKnown RBP3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 NRBF2Q96F24 287 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 BICD1Q96G01 975 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 CNDP2Q96KP4 475 aaKnown RBP3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 RMDN3Q96TC7 470 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 NT5C3AQ9H0P0 336 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 AGO4Q9HCK5 861 aaKnown RBP3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 DLL4Q9NR61 685 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 PAPOLBQ9NRJ5 636 aaKnown RBP3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 PLSCR4Q9NRQ2 329 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 CWC15Q9P013 229 aaKnown RBP3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 NTMQ9P121 344 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 DMTF1Q9Y222 760 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 RRP7AQ9Y3A4 280 aaKnown RBP3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 KDM6BO15054 1643 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 KIF27Q86VH2 1401 aa3.87□□□□□ -1.79
FNDC3B-209ENST00000478016 TSPOAP1O95153 1857 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 IQGAP2Q13576 1575 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 CYP2D7A0A087X1C5 515 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 GPR75-ASB3A0A0A6YYF3 556 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 C17orf113A0A1B0GUU1 675 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 PTPDC1A2A3K4 754 aa3.86□□□□□ -1.79
FNDC3B-209ENST00000478016 SH3D21A4FU49 640 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms