RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 TUBGCP2Q9BSJ2 902 aa16.51■□□□□ 0.23
SEC13-215ENST00000477547 COLEC11Q9BWP8 271 aa16.51■□□□□ 0.23
SEC13-215ENST00000477547 AGAP1Q9UPQ3 857 aa16.51■□□□□ 0.23
SEC13-215ENST00000477547 NUB1Q9Y5A7 615 aa16.51■□□□□ 0.23
SEC13-215ENST00000477547 ANO9A1A5B4 782 aa16.5■□□□□ 0.23
SEC13-215ENST00000477547 RFXAPO00287 272 aa16.5■□□□□ 0.23
SEC13-215ENST00000477547 PES1O00541 588 aaKnown RBP16.5■□□□□ 0.23
SEC13-215ENST00000477547 C4BPAP04003 597 aaKnown RBP16.5■□□□□ 0.23
SEC13-215ENST00000477547 ALDH2P05091 517 aa16.5■□□□□ 0.23
SEC13-215ENST00000477547 ITGB1P05556 798 aa16.5■□□□□ 0.23
SEC13-215ENST00000477547 TPM2P07951 284 aa16.5■□□□□ 0.23
SEC13-215ENST00000477547 CDK11BP21127 795 aaKnown RBP16.5■□□□□ 0.23
SEC13-215ENST00000477547 RBP5P82980 135 aa16.5■□□□□ 0.23
SEC13-215ENST00000477547 KCNH2Q12809 1159 aa16.5■□□□□ 0.23
SEC13-215ENST00000477547 TRPC3Q13507 836 aa16.5■□□□□ 0.23
SEC13-215ENST00000477547 NCOA4Q13772 614 aa16.5■□□□□ 0.23
SEC13-215ENST00000477547 LRRC52Q8N7C0 313 aa16.5■□□□□ 0.23
SEC13-215ENST00000477547 CXorf38Q8TB03 319 aa16.5■□□□□ 0.23
SEC13-215ENST00000477547 TAS1R2Q8TE23 839 aa16.5■□□□□ 0.23
SEC13-215ENST00000477547 TMEM169Q96HH4 297 aa16.5■□□□□ 0.23
SEC13-215ENST00000477547 SPG21Q9NZD8 308 aa16.5■□□□□ 0.23
SEC13-215ENST00000477547 ADAM28Q9UKQ2 775 aa16.5■□□□□ 0.23
SEC13-215ENST00000477547 PIRO00625 290 aa16.49■□□□□ 0.23
SEC13-215ENST00000477547 VNN1O95497 513 aa16.49■□□□□ 0.23
SEC13-215ENST00000477547 HLA-DRAP01903 254 aa16.49■□□□□ 0.23
SEC13-215ENST00000477547 BMPR1AP36894 532 aa16.49■□□□□ 0.23
SEC13-215ENST00000477547 PNPLA4P41247 253 aa16.49■□□□□ 0.23
SEC13-215ENST00000477547 TAF6P49848 677 aa16.49■□□□□ 0.23
SEC13-215ENST00000477547 ERVK-21P61565 698 aa16.49■□□□□ 0.23
SEC13-215ENST00000477547 AAK1Q2M2I8 961 aa16.49■□□□□ 0.23
SEC13-215ENST00000477547 ZNF699Q32M78 642 aa16.49■□□□□ 0.23
SEC13-215ENST00000477547 SV2CQ496J9 727 aa16.49■□□□□ 0.23
SEC13-215ENST00000477547 EPC2Q52LR7 807 aa16.49■□□□□ 0.23
SEC13-215ENST00000477547 MIIPQ5JXC2 388 aa16.49■□□□□ 0.23
SEC13-215ENST00000477547 FUT10Q6P4F1 479 aa16.49■□□□□ 0.23
SEC13-215ENST00000477547 DCLRE1AQ6PJP8 1040 aa16.49■□□□□ 0.23
SEC13-215ENST00000477547 FBXO22Q8NEZ5 403 aa16.49■□□□□ 0.23
SEC13-215ENST00000477547 KHSRPQ92945 711 aaKnown RBP eCLIP16.49■□□□□ 0.23
SEC13-215ENST00000477547 IGSF21Q96ID5 467 aa16.49■□□□□ 0.23
SEC13-215ENST00000477547 C11orf84Q9BUA3 381 aaPredicted RBP16.49■□□□□ 0.23
SEC13-215ENST00000477547 PLVAPQ9BX97 442 aa16.49■□□□□ 0.23
SEC13-215ENST00000477547 IMPG2Q9BZV3 1241 aa16.49■□□□□ 0.23
SEC13-215ENST00000477547 CERS4Q9HA82 394 aa16.49■□□□□ 0.23
SEC13-215ENST00000477547 LIMA1Q9UHB6 759 aaKnown RBP16.49■□□□□ 0.23
SEC13-215ENST00000477547 ARIH1Q9Y4X5 557 aaPredicted RBP16.49■□□□□ 0.23
SEC13-215ENST00000477547 PRRC2BQ5JSZ5 2229 aaKnown RBP16.49■□□□□ 0.23
SEC13-215ENST00000477547 SF3B1O75533 1304 aaKnown RBP eCLIP16.49■□□□□ 0.234e-7■■■■■ 40.1
SEC13-215ENST00000477547 FAM86C2PA6NEL3 165 aa16.48■□□□□ 0.23
SEC13-215ENST00000477547 C5orf67F2Z3F1 127 aa16.48■□□□□ 0.23
SEC13-215ENST00000477547 FGF18O76093 207 aa16.48■□□□□ 0.23
SEC13-215ENST00000477547 COPB1P53618 953 aaKnown RBP16.48■□□□□ 0.23
SEC13-215ENST00000477547 MYL6P60660 151 aa16.48■□□□□ 0.23
SEC13-215ENST00000477547 MYO1EQ12965 1108 aa16.48■□□□□ 0.23
SEC13-215ENST00000477547 VWA3BQ502W6 1294 aa16.48■□□□□ 0.23
SEC13-215ENST00000477547 TMEM31Q5JXX7 168 aa16.48■□□□□ 0.23
SEC13-215ENST00000477547 SCARA3Q6AZY7 606 aa16.48■□□□□ 0.23
SEC13-215ENST00000477547 KLHL23Q8NBE8 558 aa16.48■□□□□ 0.23
SEC13-215ENST00000477547 FBXL13Q8NEE6 735 aa16.48■□□□□ 0.23
SEC13-215ENST00000477547 ARNTL2Q8WYA1 636 aa16.48■□□□□ 0.23
SEC13-215ENST00000477547 HPDLQ96IR7 371 aa16.48■□□□□ 0.23
SEC13-215ENST00000477547 VPS16Q9H269 839 aa16.48■□□□□ 0.23
SEC13-215ENST00000477547 NDST4Q9H3R1 872 aa16.48■□□□□ 0.23
SEC13-215ENST00000477547 GCNT4Q9P109 453 aa16.48■□□□□ 0.23
SEC13-215ENST00000477547 I3L4J1 428 aa16.47■□□□□ 0.23
SEC13-215ENST00000477547 P4HA2O15460 535 aa16.47■□□□□ 0.23
SEC13-215ENST00000477547 TADA2AO75478 443 aa16.47■□□□□ 0.23
SEC13-215ENST00000477547 IGFBP6P24592 240 aaPredicted RBP16.47■□□□□ 0.23
SEC13-215ENST00000477547 BRCC3P46736 316 aa16.47■□□□□ 0.23
SEC13-215ENST00000477547 NOP14P78316 857 aaKnown RBP16.47■□□□□ 0.23
SEC13-215ENST00000477547 CETN1Q12798 172 aa16.47■□□□□ 0.23
SEC13-215ENST00000477547 GAS2L3Q86XJ1 694 aa16.47■□□□□ 0.23
SEC13-215ENST00000477547 GDPD5Q8WTR4 605 aa16.47■□□□□ 0.23
SEC13-215ENST00000477547 C11orf16Q9NQ32 467 aa16.47■□□□□ 0.23
SEC13-215ENST00000477547 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.47■□□□□ 0.232e-6■■■■■ 35.4
SEC13-215ENST00000477547 TRANK1O15050 2925 aa16.47■□□□□ 0.23
SEC13-215ENST00000477547 LGALS16A8MUM7 142 aa16.46■□□□□ 0.23
SEC13-215ENST00000477547 SPTLC1O15269 473 aa16.46■□□□□ 0.23
SEC13-215ENST00000477547 TRAPPC3O43617 180 aa16.46■□□□□ 0.23
SEC13-215ENST00000477547 ASS1P00966 412 aaKnown RBP16.46■□□□□ 0.23
SEC13-215ENST00000477547 RB1P06400 928 aa16.46■□□□□ 0.23
SEC13-215ENST00000477547 ATICP31939 592 aa16.46■□□□□ 0.23
SEC13-215ENST00000477547 AARSP49588 968 aaKnown RBP eCLIP16.46■□□□□ 0.23
SEC13-215ENST00000477547 LILRA4P59901 499 aa16.46■□□□□ 0.23
SEC13-215ENST00000477547 ELAVL2Q12926 359 aaKnown RBP16.46■□□□□ 0.23
SEC13-215ENST00000477547 CD300LGQ6UXG3 332 aa16.46■□□□□ 0.23
SEC13-215ENST00000477547 APTXQ7Z2E3 356 aaKnown RBP16.46■□□□□ 0.23
SEC13-215ENST00000477547 ALYREFQ86V81 257 aaKnown RBP16.46■□□□□ 0.23
SEC13-215ENST00000477547 CCDC150Q8NCX0 1101 aa16.46■□□□□ 0.23
SEC13-215ENST00000477547 SEMA4DQ92854 862 aa16.46■□□□□ 0.23
SEC13-215ENST00000477547 PI4K2AQ9BTU6 479 aa16.46■□□□□ 0.23
SEC13-215ENST00000477547 HERC2P3Q9BVR0 1158 aa16.46■□□□□ 0.23
SEC13-215ENST00000477547 VN1R3Q9BXE9 311 aa16.46■□□□□ 0.23
SEC13-215ENST00000477547 XYLT2Q9H1B5 865 aa16.46■□□□□ 0.23
SEC13-215ENST00000477547 RBSNQ9H1K0 784 aa16.46■□□□□ 0.23
SEC13-215ENST00000477547 MTCH2Q9Y6C9 303 aa16.46■□□□□ 0.23
SEC13-215ENST00000477547 PLXNA3P51805 1871 aa16.46■□□□□ 0.23
SEC13-215ENST00000477547 KPNA7A9QM74 516 aa16.45■□□□□ 0.22
SEC13-215ENST00000477547 PMM2O15305 246 aa16.45■□□□□ 0.22
SEC13-215ENST00000477547 CSPG5O95196 566 aa16.45■□□□□ 0.22
SEC13-215ENST00000477547 STAU1O95793 577 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms