RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 LILRA4P59901 499 aa17.39■□□□□ 0.37
VHL-203ENST00000477538 LRMPQ12912 555 aa17.39■□□□□ 0.37
VHL-203ENST00000477538 ZNF667Q5HYK9 610 aa17.39■□□□□ 0.37
VHL-203ENST00000477538 SPOPLQ6IQ16 392 aa17.39■□□□□ 0.37
VHL-203ENST00000477538 CLP1Q92989 425 aaKnown RBP17.39■□□□□ 0.37
VHL-203ENST00000477538 NT5C1BQ96P26 610 aa17.39■□□□□ 0.37
VHL-203ENST00000477538 VRTNQ9H8Y1 702 aa17.39■□□□□ 0.37
VHL-203ENST00000477538 AAASQ9NRG9 546 aa17.39■□□□□ 0.37
VHL-203ENST00000477538 MARCH5Q9NX47 278 aa17.39■□□□□ 0.37
VHL-203ENST00000477538 ADAM28Q9UKQ2 775 aa17.39■□□□□ 0.37
VHL-203ENST00000477538 LINC01553A4QN01 128 aa17.38■□□□□ 0.37
VHL-203ENST00000477538 KPNA7A9QM74 516 aa17.38■□□□□ 0.37
VHL-203ENST00000477538 SPTLC1O15269 473 aa17.38■□□□□ 0.37
VHL-203ENST00000477538 LINC00271P0C7V0 271 aa17.38■□□□□ 0.37
VHL-203ENST00000477538 TNNC1P63316 161 aa17.38■□□□□ 0.37
VHL-203ENST00000477538 WDR72Q3MJ13 1102 aa17.38■□□□□ 0.37
VHL-203ENST00000477538 CD300LGQ6UXG3 332 aa17.38■□□□□ 0.37
VHL-203ENST00000477538 TATDN2Q93075 761 aa17.38■□□□□ 0.37
VHL-203ENST00000477538 APOBEC3GQ9HC16 384 aaKnown RBP17.38■□□□□ 0.37
VHL-203ENST00000477538 SIX2Q9NPC8 291 aa17.38■□□□□ 0.37
VHL-203ENST00000477538 PLCB1Q9NQ66 1216 aa17.38■□□□□ 0.37
VHL-203ENST00000477538 FAM207AQ9NSI2 230 aaPredicted RBP17.38■□□□□ 0.37
VHL-203ENST00000477538 NXF1Q9UBU9 619 aaKnown RBP17.38■□□□□ 0.37
VHL-203ENST00000477538 MSRAQ9UJ68 235 aa17.38■□□□□ 0.37
VHL-203ENST00000477538 PCDHB12Q9Y5F1 795 aa17.38■□□□□ 0.37
VHL-203ENST00000477538 COL4A4P53420 1690 aaPredicted RBP17.38■□□□□ 0.37
VHL-203ENST00000477538 TRIOBPQ9H2D6 2365 aa17.38■□□□□ 0.37
VHL-203ENST00000477538 TADA2AO75478 443 aa17.37■□□□□ 0.37
VHL-203ENST00000477538 CA3P07451 260 aa17.37■□□□□ 0.37
VHL-203ENST00000477538 P4HA1P13674 534 aa17.37■□□□□ 0.37
VHL-203ENST00000477538 PAX3P23760 479 aa17.37■□□□□ 0.37
VHL-203ENST00000477538 PPM1AP35813 382 aa17.37■□□□□ 0.37
VHL-203ENST00000477538 PBX2P40425 430 aa17.37■□□□□ 0.37
VHL-203ENST00000477538 BRCC3P46736 316 aa17.37■□□□□ 0.37
VHL-203ENST00000477538 APBA1Q02410 837 aa17.37■□□□□ 0.37
VHL-203ENST00000477538 RAB30Q15771 203 aa17.37■□□□□ 0.37
VHL-203ENST00000477538 DPY19L2P1Q6NXN4 242 aa17.37■□□□□ 0.37
VHL-203ENST00000477538 DSTYKQ6XUX3 929 aa17.37■□□□□ 0.37
VHL-203ENST00000477538 SCARA5Q6ZMJ2 495 aa17.37■□□□□ 0.37
VHL-203ENST00000477538 TMEM173Q86WV6 379 aaPredicted RBP17.37■□□□□ 0.37
VHL-203ENST00000477538 ARHGEF19Q8IW93 802 aa17.37■□□□□ 0.37
VHL-203ENST00000477538 SLC39A11Q8N1S5 342 aa17.37■□□□□ 0.37
VHL-203ENST00000477538 NEK11Q8NG66 645 aa17.37■□□□□ 0.37
VHL-203ENST00000477538 MRFAP1L1Q96HT8 127 aa17.37■□□□□ 0.37
VHL-203ENST00000477538 IGSF21Q96ID5 467 aa17.37■□□□□ 0.37
VHL-203ENST00000477538 PBX4Q9BYU1 374 aa17.37■□□□□ 0.37
VHL-203ENST00000477538 NIF3L1Q9GZT8 377 aa17.37■□□□□ 0.37
VHL-203ENST00000477538 GDAP2Q9NXN4 497 aa17.37■□□□□ 0.37
VHL-203ENST00000477538 SPG21Q9NZD8 308 aa17.37■□□□□ 0.37
VHL-203ENST00000477538 APEX2Q9UBZ4 518 aa17.37■□□□□ 0.37
VHL-203ENST00000477538 POLIQ9UNA4 740 aa17.37■□□□□ 0.37
VHL-203ENST00000477538 YBX2Q9Y2T7 364 aaKnown RBP17.37■□□□□ 0.37
VHL-203ENST00000477538 RWDD3Q9Y3V2 267 aa17.37■□□□□ 0.37
VHL-203ENST00000477538 SNX9Q9Y5X1 595 aa17.37■□□□□ 0.37
VHL-203ENST00000477538 PTPRDP23468 1912 aa17.37■□□□□ 0.37
VHL-203ENST00000477538 TRAPPC3O43617 180 aa17.36■□□□□ 0.37
VHL-203ENST00000477538 ARHGEF15O94989 841 aa17.36■□□□□ 0.37
VHL-203ENST00000477538 ADCY5O95622 1261 aa17.36■□□□□ 0.37
VHL-203ENST00000477538 CTNNB1P35222 781 aa17.36■□□□□ 0.37
VHL-203ENST00000477538 AARSP49588 968 aaKnown RBP eCLIP17.36■□□□□ 0.37
VHL-203ENST00000477538 TIGD5Q53EQ6 642 aa17.36■□□□□ 0.37
VHL-203ENST00000477538 KLHDC7AQ5VTJ3 777 aa17.36■□□□□ 0.37
VHL-203ENST00000477538 PHLDB3Q6NSJ2 640 aa17.36■□□□□ 0.37
VHL-203ENST00000477538 GJB7Q6PEY0 223 aa17.36■□□□□ 0.37
VHL-203ENST00000477538 VSTM4Q8IW00 320 aa17.36■□□□□ 0.37
VHL-203ENST00000477538 PPM1KQ8N3J5 372 aa17.36■□□□□ 0.37
VHL-203ENST00000477538 BCL7CQ8WUZ0 217 aaPredicted RBP17.36■□□□□ 0.37
VHL-203ENST00000477538 SUSD3Q96L08 255 aa17.36■□□□□ 0.37
VHL-203ENST00000477538 SENP8Q96LD8 212 aa17.36■□□□□ 0.37
VHL-203ENST00000477538 GANQ9H2C0 597 aa17.36■□□□□ 0.37
VHL-203ENST00000477538 A0A1W2PPC1 479 aa17.35■□□□□ 0.37
VHL-203ENST00000477538 I3L4J1 428 aa17.35■□□□□ 0.37
VHL-203ENST00000477538 CYB561D2O14569 222 aa17.35■□□□□ 0.37
VHL-203ENST00000477538 ODC1P11926 461 aa17.35■□□□□ 0.37
VHL-203ENST00000477538 TRIM21P19474 475 aaKnown RBP17.35■□□□□ 0.37
VHL-203ENST00000477538 TBXAS1P24557 533 aaPredicted RBP17.35■□□□□ 0.37
VHL-203ENST00000477538 ASPAP45381 313 aa17.35■□□□□ 0.37
VHL-203ENST00000477538 CUL2Q13617 745 aa17.35■□□□□ 0.37
VHL-203ENST00000477538 FUT10Q6P4F1 479 aa17.35■□□□□ 0.37
VHL-203ENST00000477538 RRAGAQ7L523 313 aa17.35■□□□□ 0.37
VHL-203ENST00000477538 TMEM169Q96HH4 297 aa17.35■□□□□ 0.37
VHL-203ENST00000477538 FAXDC2Q96IV6 333 aa17.35■□□□□ 0.37
VHL-203ENST00000477538 FAM81BQ96LP2 452 aa17.35■□□□□ 0.37
VHL-203ENST00000477538 MMS19Q96T76 1030 aa17.35■□□□□ 0.37
VHL-203ENST00000477538 NKX2-4Q9H2Z4 354 aa17.35■□□□□ 0.37
VHL-203ENST00000477538 UBE2TQ9NPD8 197 aaPredicted RBP17.35■□□□□ 0.37
VHL-203ENST00000477538 FHOD1Q9Y613 1164 aa17.35■□□□□ 0.37
VHL-203ENST00000477538 SF3B1O75533 1304 aaKnown RBP eCLIP17.35■□□□□ 0.37
VHL-203ENST00000477538 ITIH6Q6UXX5 1313 aa17.35■□□□□ 0.37
VHL-203ENST00000477538 ARHGEF37A1IGU5 675 aa17.34■□□□□ 0.37
VHL-203ENST00000477538 M0QZQ0 153 aa17.34■□□□□ 0.37
VHL-203ENST00000477538 EPHB6O15197 1021 aa17.34■□□□□ 0.37
VHL-203ENST00000477538 HUS1O60921 280 aa17.34■□□□□ 0.37
VHL-203ENST00000477538 NOL4O94818 638 aa17.34■□□□□ 0.37
VHL-203ENST00000477538 UCHL3P15374 230 aa17.34■□□□□ 0.37
VHL-203ENST00000477538 RFX1P22670 979 aa17.34■□□□□ 0.37
VHL-203ENST00000477538 BMPR1AP36894 532 aa17.34■□□□□ 0.37
VHL-203ENST00000477538 RAP1GAPP47736 663 aa17.34■□□□□ 0.37
VHL-203ENST00000477538 POLR2FP61218 127 aaKnown RBP17.34■□□□□ 0.37
VHL-203ENST00000477538 SMAD3P84022 425 aaKnown RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms