RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 PHACTR2O75167 634 aa17.1■□□□□ 0.33
COPS3-207ENST00000477299 FGFR3P22607 806 aa17.1■□□□□ 0.33
COPS3-207ENST00000477299 AARSP49588 968 aaKnown RBP eCLIP17.1■□□□□ 0.33
COPS3-207ENST00000477299 TAF6P49848 677 aa17.1■□□□□ 0.33
COPS3-207ENST00000477299 ZNF165P49910 485 aa17.1■□□□□ 0.33
COPS3-207ENST00000477299 CDR1P51861 262 aa17.1■□□□□ 0.33
COPS3-207ENST00000477299 KCNH2Q12809 1159 aa17.1■□□□□ 0.33
COPS3-207ENST00000477299 CDKAL1Q5VV42 579 aa17.1■□□□□ 0.33
COPS3-207ENST00000477299 RSPO2Q6UXX9 243 aaPredicted RBP17.1■□□□□ 0.33
COPS3-207ENST00000477299 TMC7Q7Z402 723 aa17.1■□□□□ 0.33
COPS3-207ENST00000477299 MICAL1Q8TDZ2 1067 aa17.1■□□□□ 0.33
COPS3-207ENST00000477299 HPDLQ96IR7 371 aa17.1■□□□□ 0.33
COPS3-207ENST00000477299 SUSD3Q96L08 255 aa17.1■□□□□ 0.33
COPS3-207ENST00000477299 HERC2P3Q9BVR0 1158 aa17.1■□□□□ 0.33
COPS3-207ENST00000477299 THAP9Q9H5L6 903 aa17.1■□□□□ 0.33
COPS3-207ENST00000477299 CBX8Q9HC52 389 aa17.1■□□□□ 0.33
COPS3-207ENST00000477299 METTL14Q9HCE5 456 aaKnown RBP17.1■□□□□ 0.33
COPS3-207ENST00000477299 PUF60Q9UHX1 559 aaKnown RBP17.1■□□□□ 0.33
COPS3-207ENST00000477299 POLIQ9UNA4 740 aa17.1■□□□□ 0.33
COPS3-207ENST00000477299 LZTS1Q9Y250 596 aa17.1■□□□□ 0.33
COPS3-207ENST00000477299 KPNA7A9QM74 516 aa17.09■□□□□ 0.33
COPS3-207ENST00000477299 KCNJ18B7U540 433 aa17.09■□□□□ 0.33
COPS3-207ENST00000477299 M0QZQ0 153 aa17.09■□□□□ 0.33
COPS3-207ENST00000477299 PER2O15055 1255 aa17.09■□□□□ 0.33
COPS3-207ENST00000477299 ADAM12O43184 909 aa17.09■□□□□ 0.33
COPS3-207ENST00000477299 HCRTO43612 131 aa17.09■□□□□ 0.33
COPS3-207ENST00000477299 CTSAP10619 480 aa17.09■□□□□ 0.33
COPS3-207ENST00000477299 CA8P35219 290 aa17.09■□□□□ 0.33
COPS3-207ENST00000477299 FMO5P49326 533 aa17.09■□□□□ 0.33
COPS3-207ENST00000477299 RBM10P98175 930 aaKnown RBP17.09■□□□□ 0.33
COPS3-207ENST00000477299 MYL5Q02045 173 aa17.09■□□□□ 0.33
COPS3-207ENST00000477299 UBE3AQ05086 875 aa17.09■□□□□ 0.33
COPS3-207ENST00000477299 NCOA4Q13772 614 aa17.09■□□□□ 0.33
COPS3-207ENST00000477299 KCNJ12Q14500 433 aa17.09■□□□□ 0.33
COPS3-207ENST00000477299 PTPN14Q15678 1187 aa17.09■□□□□ 0.33
COPS3-207ENST00000477299 USP41Q3LFD5 358 aa17.09■□□□□ 0.33
COPS3-207ENST00000477299 DSTYKQ6XUX3 929 aa17.09■□□□□ 0.33
COPS3-207ENST00000477299 RBM23Q86U06 439 aaKnown RBP17.09■□□□□ 0.33
COPS3-207ENST00000477299 GLYCTKQ8IVS8 523 aa17.09■□□□□ 0.33
COPS3-207ENST00000477299 LNX1Q8TBB1 728 aaPredicted RBP17.09■□□□□ 0.33
COPS3-207ENST00000477299 RIN2Q8WYP3 895 aaPredicted RBP17.09■□□□□ 0.33
COPS3-207ENST00000477299 MRPL38Q96DV4 380 aaKnown RBP17.09■□□□□ 0.33
COPS3-207ENST00000477299 TMEM8AQ9HCN3 771 aa17.09■□□□□ 0.33
COPS3-207ENST00000477299 ENTPD7Q9NQZ7 604 aa17.09■□□□□ 0.33
COPS3-207ENST00000477299 SF3B1O75533 1304 aaKnown RBP eCLIP17.09■□□□□ 0.33
COPS3-207ENST00000477299 MTCL1Q9Y4B5 1905 aaKnown RBP17.09■□□□□ 0.33
COPS3-207ENST00000477299 C2orf71A6NGG8 1288 aa17.08■□□□□ 0.32
COPS3-207ENST00000477299 CYB561D2O14569 222 aa17.08■□□□□ 0.32
COPS3-207ENST00000477299 FGFR1OPO95684 399 aaKnown RBP17.08■□□□□ 0.32
COPS3-207ENST00000477299 GNA14O95837 355 aa17.08■□□□□ 0.32
COPS3-207ENST00000477299 ATP1A3P13637 1013 aa17.08■□□□□ 0.32
COPS3-207ENST00000477299 MTIF2P46199 727 aaKnown RBP17.08■□□□□ 0.32
COPS3-207ENST00000477299 DSG1Q02413 1049 aa17.08■□□□□ 0.32
COPS3-207ENST00000477299 ENPEPQ07075 957 aa17.08■□□□□ 0.32
COPS3-207ENST00000477299 TRPC3Q13507 836 aa17.08■□□□□ 0.32
COPS3-207ENST00000477299 CCDC85BQ15834 202 aaPredicted RBP17.08■□□□□ 0.32
COPS3-207ENST00000477299 WSCD1Q658N2 575 aa17.08■□□□□ 0.32
COPS3-207ENST00000477299 KRT39Q6A163 491 aa17.08■□□□□ 0.32
COPS3-207ENST00000477299 LRSAM1Q6UWE0 723 aa17.08■□□□□ 0.32
COPS3-207ENST00000477299 LUZP1Q86V48 1076 aa17.08■□□□□ 0.32
COPS3-207ENST00000477299 OSTM1Q86WC4 334 aa17.08■□□□□ 0.32
COPS3-207ENST00000477299 MICALL1Q8N3F8 863 aa17.08■□□□□ 0.32
COPS3-207ENST00000477299 LRRC52Q8N7C0 313 aa17.08■□□□□ 0.32
COPS3-207ENST00000477299 TTPALQ9BTX7 342 aa17.08■□□□□ 0.32
COPS3-207ENST00000477299 APOBEC3GQ9HC16 384 aaKnown RBP17.08■□□□□ 0.32
COPS3-207ENST00000477299 NME7Q9Y5B8 376 aa17.08■□□□□ 0.32
COPS3-207ENST00000477299 SNX9Q9Y5X1 595 aa17.08■□□□□ 0.32
COPS3-207ENST00000477299 GLUD2P49448 558 aa17.07■□□□□ 0.32
COPS3-207ENST00000477299 MXI1P50539 228 aa17.07■□□□□ 0.32
COPS3-207ENST00000477299 AP3M2P53677 418 aa17.07■□□□□ 0.32
COPS3-207ENST00000477299 CDH8P55286 799 aa17.07■□□□□ 0.32
COPS3-207ENST00000477299 APBA1Q02410 837 aa17.07■□□□□ 0.32
COPS3-207ENST00000477299 SOWAHAQ2M3V2 549 aa17.07■□□□□ 0.32
COPS3-207ENST00000477299 SV2CQ496J9 727 aa17.07■□□□□ 0.32
COPS3-207ENST00000477299 TCP11X2Q5H9J9 407 aa17.07■□□□□ 0.32
COPS3-207ENST00000477299 TCEAL5Q5H9L2 206 aa17.07■□□□□ 0.32
COPS3-207ENST00000477299 MIIPQ5JXC2 388 aa17.07■□□□□ 0.32
COPS3-207ENST00000477299 VARS2Q5ST30 1063 aaKnown RBP17.07■□□□□ 0.32
COPS3-207ENST00000477299 MRPL43Q8N983 215 aaKnown RBP17.07■□□□□ 0.32
COPS3-207ENST00000477299 TATDN2Q93075 761 aa17.07■□□□□ 0.32
COPS3-207ENST00000477299 GAS2L1Q99501 681 aaPredicted RBP17.07■□□□□ 0.32
COPS3-207ENST00000477299 BPIFA3Q9BQP9 254 aa17.07■□□□□ 0.32
COPS3-207ENST00000477299 RTP3Q9BQQ7 232 aa17.07■□□□□ 0.32
COPS3-207ENST00000477299 LMAN2LQ9H0V9 348 aa17.07■□□□□ 0.32
COPS3-207ENST00000477299 SDCBP2Q9H190 292 aa17.07■□□□□ 0.32
COPS3-207ENST00000477299 TAB2Q9NYJ8 693 aa17.07■□□□□ 0.32
COPS3-207ENST00000477299 NXF1Q9UBU9 619 aaKnown RBP17.07■□□□□ 0.32
COPS3-207ENST00000477299 PCDHB8Q9UN66 801 aa17.07■□□□□ 0.32
COPS3-207ENST00000477299 L1RE1Q9UN81 338 aa17.07■□□□□ 0.32
COPS3-207ENST00000477299 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.07■□□□□ 0.32
COPS3-207ENST00000477299 DOCK6Q96HP0 2047 aa17.06■□□□□ 0.32
COPS3-207ENST00000477299 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.06■□□□□ 0.32
COPS3-207ENST00000477299 TRAPPC3O43617 180 aa17.06■□□□□ 0.32
COPS3-207ENST00000477299 ASS1P00966 412 aaKnown RBP17.06■□□□□ 0.32
COPS3-207ENST00000477299 CNPP09543 421 aaKnown RBP17.06■□□□□ 0.32
COPS3-207ENST00000477299 ZNF18P17022 549 aa17.06■□□□□ 0.32
COPS3-207ENST00000477299 POU3F3P20264 500 aaPredicted RBP17.06■□□□□ 0.32
COPS3-207ENST00000477299 GTF2H1P32780 548 aa17.06■□□□□ 0.32
COPS3-207ENST00000477299 PIK3CAP42336 1068 aa17.06■□□□□ 0.32
COPS3-207ENST00000477299 RAP1GAPP47736 663 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms