RNA–Protein interactions for RNA: ENST00000476972.6

GMDS-204, Transcript of GDP-mannose 4,6-dehydratase, human

TSL 2

Gene GMDS, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GMDS-204	ENST00000476972	ADSS	P30520	456 aa		20.7	■□□□□ 0.9
GMDS-204	ENST00000476972	LRPAP1	P30533	357 aa		20.7	■□□□□ 0.9
GMDS-204	ENST00000476972	MCM4	P33991	863 aa		20.7	■□□□□ 0.9
GMDS-204	ENST00000476972	GUCY2F	P51841	1108 aa		20.7	■□□□□ 0.9
GMDS-204	ENST00000476972	ASIC1	P78348	528 aa		20.7	■□□□□ 0.9
GMDS-204	ENST00000476972	KRT85	P78386	507 aa		20.7	■□□□□ 0.9
GMDS-204	ENST00000476972	PHLDB3	Q6NSJ2	640 aa		20.7	■□□□□ 0.9
GMDS-204	ENST00000476972	HPS3	Q969F9	1004 aa		20.7	■□□□□ 0.9
GMDS-204	ENST00000476972	FAM212A	Q96EL1	285 aa		20.7	■□□□□ 0.9
GMDS-204	ENST00000476972	MAGEF1	Q9HAY2	307 aa		20.7	■□□□□ 0.9
GMDS-204	ENST00000476972	SLC2A4RG	Q9NR83	387 aa		20.7	■□□□□ 0.9
GMDS-204	ENST00000476972	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	20.7	■□□□□ 0.9
GMDS-204	ENST00000476972	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	20.7	■□□□□ 0.9
GMDS-204	ENST00000476972	XPOT	O43592	962 aa	Known RBP	20.69	■□□□□ 0.9
GMDS-204	ENST00000476972	C8A	P07357	584 aa		20.69	■□□□□ 0.9
GMDS-204	ENST00000476972	NFIC	P08651	508 aa		20.69	■□□□□ 0.9
GMDS-204	ENST00000476972	HNRNPA1	P09651	372 aa	Known RBP eCLIP	20.69	■□□□□ 0.9
GMDS-204	ENST00000476972	CYP3A5	P20815	502 aa		20.69	■□□□□ 0.9
GMDS-204	ENST00000476972	GPC5	P78333	572 aa		20.69	■□□□□ 0.9
GMDS-204	ENST00000476972	AMPD3	Q01432	767 aa		20.69	■□□□□ 0.9
GMDS-204	ENST00000476972	PPM1L	Q5SGD2	360 aa		20.69	■□□□□ 0.9
GMDS-204	ENST00000476972	VARS2	Q5ST30	1063 aa	Known RBP	20.69	■□□□□ 0.9
GMDS-204	ENST00000476972	LIN9	Q5TKA1	542 aa		20.69	■□□□□ 0.9
GMDS-204	ENST00000476972	JADE1	Q6IE81	842 aa		20.69	■□□□□ 0.9
GMDS-204	ENST00000476972	CNNM4	Q6P4Q7	775 aa		20.69	■□□□□ 0.9
GMDS-204	ENST00000476972	PARM1	Q6UWI2	310 aa		20.69	■□□□□ 0.9
GMDS-204	ENST00000476972	RSPO2	Q6UXX9	243 aa	Predicted RBP	20.69	■□□□□ 0.9
GMDS-204	ENST00000476972	ANKS3	Q6ZW76	656 aa		20.69	■□□□□ 0.9
GMDS-204	ENST00000476972	GLIS3	Q8NEA6	775 aa		20.69	■□□□□ 0.9
GMDS-204	ENST00000476972	LEO1	Q8WVC0	666 aa	Predicted RBP	20.69	■□□□□ 0.9
GMDS-204	ENST00000476972	FGF14	Q92915	247 aa		20.69	■□□□□ 0.9
GMDS-204	ENST00000476972	SUSD3	Q96L08	255 aa		20.69	■□□□□ 0.9
GMDS-204	ENST00000476972	ARHGEF3	Q9NR81	526 aa		20.69	■□□□□ 0.9
GMDS-204	ENST00000476972	CDH7	Q9ULB5	785 aa		20.69	■□□□□ 0.9
GMDS-204	ENST00000476972	SIT1	Q9Y3P8	196 aa		20.69	■□□□□ 0.9
GMDS-204	ENST00000476972	BACE2	Q9Y5Z0	518 aa		20.69	■□□□□ 0.9
GMDS-204	ENST00000476972	CDY1	Q9Y6F8	540 aa		20.69	■□□□□ 0.9
GMDS-204	ENST00000476972	SYN3	O14994	580 aa		20.68	■□□□□ 0.9
GMDS-204	ENST00000476972	CCL16	O15467	120 aa		20.68	■□□□□ 0.9
GMDS-204	ENST00000476972	PRPF6	O94906	941 aa	Known RBP	20.68	■□□□□ 0.9
GMDS-204	ENST00000476972	OR1D2	P34982	312 aa		20.68	■□□□□ 0.9
GMDS-204	ENST00000476972	RAB33A	Q14088	237 aa		20.68	■□□□□ 0.9
GMDS-204	ENST00000476972	BECN1	Q14457	450 aa		20.68	■□□□□ 0.9
GMDS-204	ENST00000476972	POSTN	Q15063	836 aa		20.68	■□□□□ 0.9
GMDS-204	ENST00000476972	CRELD2	Q6UXH1	353 aa	Predicted RBP	20.68	■□□□□ 0.9
GMDS-204	ENST00000476972	CD302	Q8IX05	232 aa		20.68	■□□□□ 0.9
GMDS-204	ENST00000476972	SYCP3	Q8IZU3	236 aa		20.68	■□□□□ 0.9
GMDS-204	ENST00000476972	SPATA32	Q96LK8	384 aa		20.68	■□□□□ 0.9
GMDS-204	ENST00000476972	TSPAN18	Q96SJ8	248 aa		20.68	■□□□□ 0.9
GMDS-204	ENST00000476972	C7orf25	Q9BPX7	421 aa		20.68	■□□□□ 0.9
GMDS-204	ENST00000476972	DLGAP2	Q9P1A6	1054 aa		20.68	■□□□□ 0.9
GMDS-204	ENST00000476972	POLI	Q9UNA4	740 aa		20.68	■□□□□ 0.9
GMDS-204	ENST00000476972	TCHH	Q07283	1943 aa		20.68	■□□□□ 0.9
GMDS-204	ENST00000476972	CASP1	P29466	404 aa		20.67	■□□□□ 0.9
GMDS-204	ENST00000476972	TMEM132D	Q14C87	1099 aa		20.67	■□□□□ 0.9
GMDS-204	ENST00000476972	SPATA1	Q5VX52	437 aa		20.67	■□□□□ 0.9
GMDS-204	ENST00000476972	ITFG1	Q8TB96	612 aa		20.67	■□□□□ 0.9
GMDS-204	ENST00000476972	FGF13	Q92913	245 aa		20.67	■□□□□ 0.9
GMDS-204	ENST00000476972	KCNH3	Q9ULD8	1083 aa		20.67	■□□□□ 0.9
GMDS-204	ENST00000476972	DERA	Q9Y315	318 aa		20.67	■□□□□ 0.9
GMDS-204	ENST00000476972		R4GN57	208 aa		20.67	■□□□□ 0.9
GMDS-204	ENST00000476972	EP300	Q09472	2414 aa	Predicted RBP	20.67	■□□□□ 0.9
GMDS-204	ENST00000476972	TSC2	P49815	1807 aa		20.67	■□□□□ 0.9
GMDS-204	ENST00000476972	PPEF2	O14830	753 aa		20.66	■□□□□ 0.9
GMDS-204	ENST00000476972	XYLB	O75191	536 aa		20.66	■□□□□ 0.9
GMDS-204	ENST00000476972	HOXA9	P31269	272 aa		20.66	■□□□□ 0.9
GMDS-204	ENST00000476972	FOXK2	Q01167	660 aa		20.66	■□□□□ 0.9
GMDS-204	ENST00000476972	ZSWIM2	Q8NEG5	633 aa		20.66	■□□□□ 0.9
GMDS-204	ENST00000476972	BEST2	Q8NFU1	509 aa		20.66	■□□□□ 0.9
GMDS-204	ENST00000476972	SLC7A14	Q8TBB6	771 aa		20.66	■□□□□ 0.9
GMDS-204	ENST00000476972	SAAL1	Q96ER3	474 aa		20.66	■□□□□ 0.9
GMDS-204	ENST00000476972	PYM1	Q9BRP8	204 aa	Known RBP	20.66	■□□□□ 0.9
GMDS-204	ENST00000476972	CBWD1	Q9BRT8	395 aa		20.66	■□□□□ 0.9
GMDS-204	ENST00000476972	FOXQ1	Q9C009	403 aa		20.66	■□□□□ 0.9
GMDS-204	ENST00000476972	BLZF1	Q9H2G9	400 aa		20.66	■□□□□ 0.9
GMDS-204	ENST00000476972	ASB7	Q9H672	318 aa		20.66	■□□□□ 0.9
GMDS-204	ENST00000476972	TMEM206	Q9H813	350 aa		20.66	■□□□□ 0.9
GMDS-204	ENST00000476972	PCDHB8	Q9UN66	801 aa		20.66	■□□□□ 0.9
GMDS-204	ENST00000476972	C2CD2	Q9Y426	696 aa		20.66	■□□□□ 0.9
GMDS-204	ENST00000476972	ATP6V1D	Q9Y5K8	247 aa		20.66	■□□□□ 0.9
GMDS-204	ENST00000476972	ZNF292	O60281	2723 aa		20.66	■□□□□ 0.9
GMDS-204	ENST00000476972	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	20.65	■□□□□ 0.9
GMDS-204	ENST00000476972	TBC1D4	O60343	1298 aa		20.65	■□□□□ 0.9
GMDS-204	ENST00000476972	PFKFB1	P16118	471 aa		20.65	■□□□□ 0.9
GMDS-204	ENST00000476972	GART	P22102	1010 aa		20.65	■□□□□ 0.9
GMDS-204	ENST00000476972	AFM	P43652	599 aa		20.65	■□□□□ 0.9
GMDS-204	ENST00000476972	AARS	P49588	968 aa	Known RBP eCLIP	20.65	■□□□□ 0.9
GMDS-204	ENST00000476972	STARD6	P59095	220 aa		20.65	■□□□□ 0.9
GMDS-204	ENST00000476972	POU5F1	Q01860	360 aa	Known RBP	20.65	■□□□□ 0.9
GMDS-204	ENST00000476972	ROR1	Q01973	937 aa		20.65	■□□□□ 0.9
GMDS-204	ENST00000476972	SNW1	Q13573	536 aa	Known RBP	20.65	■□□□□ 0.9
GMDS-204	ENST00000476972	MRPL58	Q14197	206 aa	Known RBP	20.65	■□□□□ 0.9
GMDS-204	ENST00000476972	UVSSA	Q2YD98	709 aa		20.65	■□□□□ 0.9
GMDS-204	ENST00000476972	FAM26F	Q5R3K3	315 aa		20.65	■□□□□ 0.9
GMDS-204	ENST00000476972	SLC8B1	Q6J4K2	584 aa		20.65	■□□□□ 0.9
GMDS-204	ENST00000476972	STXBP4	Q6ZWJ1	553 aa		20.65	■□□□□ 0.9
GMDS-204	ENST00000476972	UNC13D	Q70J99	1090 aa		20.65	■□□□□ 0.9
GMDS-204	ENST00000476972	GRAMD1C	Q8IYS0	662 aa		20.65	■□□□□ 0.9
GMDS-204	ENST00000476972	FAM213A	Q9BRX8	229 aa		20.65	■□□□□ 0.9
GMDS-204	ENST00000476972	SEMA4A	Q9H3S1	761 aa		20.65	■□□□□ 0.9

Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms