RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 RAP1GAPP47736 663 aa12.47□□□□□ -0.41
BRCA1-213ENST00000476777 KPNA1P52294 538 aaPredicted RBP12.47□□□□□ -0.41
BRCA1-213ENST00000476777 EFNA5P52803 228 aa12.47□□□□□ -0.41
BRCA1-213ENST00000476777 CCINQ13939 588 aa12.47□□□□□ -0.41
BRCA1-213ENST00000476777 STPG1Q5TH74 334 aa12.47□□□□□ -0.41
BRCA1-213ENST00000476777 YAF2Q8IY57 180 aa12.47□□□□□ -0.41
BRCA1-213ENST00000476777 CEP120Q8N960 986 aa12.47□□□□□ -0.41
BRCA1-213ENST00000476777 LOXL4Q96JB6 756 aa12.47□□□□□ -0.41
BRCA1-213ENST00000476777 ZMAT2Q96NC0 199 aaKnown RBP12.47□□□□□ -0.41
BRCA1-213ENST00000476777 LRRC3BQ96PB8 259 aa12.47□□□□□ -0.41
BRCA1-213ENST00000476777 NACC1Q96RE7 527 aa12.47□□□□□ -0.41
BRCA1-213ENST00000476777 LRRC3Q9BY71 257 aa12.47□□□□□ -0.41
BRCA1-213ENST00000476777 GPR88Q9GZN0 384 aa12.47□□□□□ -0.41
BRCA1-213ENST00000476777 SLITRK6Q9H5Y7 841 aa12.47□□□□□ -0.41
BRCA1-213ENST00000476777 TUFT1Q9NNX1 390 aa12.47□□□□□ -0.41
BRCA1-213ENST00000476777 SLC38A7Q9NVC3 462 aa12.47□□□□□ -0.41
BRCA1-213ENST00000476777 TNFSF13BQ9Y275 285 aa12.47□□□□□ -0.41
BRCA1-213ENST00000476777 CITO14578 2027 aa12.47□□□□□ -0.41
BRCA1-213ENST00000476777 NEMFO60524 1076 aa12.46□□□□□ -0.41
BRCA1-213ENST00000476777 REC8O95072 547 aa12.46□□□□□ -0.41
BRCA1-213ENST00000476777 EPN2O95208 641 aa12.46□□□□□ -0.41
BRCA1-213ENST00000476777 KCNK5O95279 499 aa12.46□□□□□ -0.41
BRCA1-213ENST00000476777 CTDNEP1O95476 244 aa12.46□□□□□ -0.41
BRCA1-213ENST00000476777 KCNE1P15382 129 aa12.46□□□□□ -0.41
BRCA1-213ENST00000476777 GRM5P41594 1212 aa12.46□□□□□ -0.41
BRCA1-213ENST00000476777 YARSP54577 528 aaKnown RBP12.46□□□□□ -0.41
BRCA1-213ENST00000476777 COL9A2Q14055 689 aaPredicted RBP12.46□□□□□ -0.41
BRCA1-213ENST00000476777 PPP2R5AQ15172 486 aa12.46□□□□□ -0.41
BRCA1-213ENST00000476777 ZNF280DQ6N043 979 aa12.46□□□□□ -0.41
BRCA1-213ENST00000476777 RNF19BQ6ZMZ0 732 aa12.46□□□□□ -0.41
BRCA1-213ENST00000476777 APBB1IPQ7Z5R6 666 aaPredicted RBP12.46□□□□□ -0.41
BRCA1-213ENST00000476777 RALGPS2Q86X27 583 aaPredicted RBP12.46□□□□□ -0.41
BRCA1-213ENST00000476777 C12orf50Q8NA57 414 aaPredicted RBP12.46□□□□□ -0.41
BRCA1-213ENST00000476777 SUSD3Q96L08 255 aa12.46□□□□□ -0.41
BRCA1-213ENST00000476777 POLR3CQ9BUI4 534 aaPredicted RBP12.46□□□□□ -0.41
BRCA1-213ENST00000476777 LSM14BQ9BX40 385 aaKnown RBP12.46□□□□□ -0.41
BRCA1-213ENST00000476777 TM6SF1Q9BZW5 370 aa12.46□□□□□ -0.41
BRCA1-213ENST00000476777 TMEM60Q9H2L4 133 aa12.46□□□□□ -0.41
BRCA1-213ENST00000476777 POLD4Q9HCU8 107 aa12.46□□□□□ -0.41
BRCA1-213ENST00000476777 PTPRHQ9HD43 1115 aa12.46□□□□□ -0.41
BRCA1-213ENST00000476777 TOPORSQ9NS56 1045 aaPredicted RBP12.46□□□□□ -0.41
BRCA1-213ENST00000476777 GTSE1Q9NYZ3 720 aa12.46□□□□□ -0.41
BRCA1-213ENST00000476777 ORC3Q9UBD5 711 aaPredicted RBP12.46□□□□□ -0.41
BRCA1-213ENST00000476777 NUB1Q9Y5A7 615 aa12.46□□□□□ -0.41
BRCA1-213ENST00000476777 FLNBO75369 2602 aaKnown RBP12.45□□□□□ -0.42
BRCA1-213ENST00000476777 ASCC3Q8N3C0 2202 aaKnown RBP12.45□□□□□ -0.42
BRCA1-213ENST00000476777 ITPR1Q14643 2758 aa12.45□□□□□ -0.42
BRCA1-213ENST00000476777 A0A1W2PRU2 124 aa12.45□□□□□ -0.42
BRCA1-213ENST00000476777 ARHGEF35A5YM69 484 aa12.45□□□□□ -0.42
BRCA1-213ENST00000476777 PCNX2A6NKB5 2137 aa12.45□□□□□ -0.42
BRCA1-213ENST00000476777 EXTL3O43909 919 aa12.45□□□□□ -0.42
BRCA1-213ENST00000476777 VNN2O95498 520 aa12.45□□□□□ -0.42
BRCA1-213ENST00000476777 RPL9P32969 192 aaKnown RBP12.45□□□□□ -0.42
BRCA1-213ENST00000476777 OSTNP61366 133 aa12.45□□□□□ -0.42
BRCA1-213ENST00000476777 PON2Q15165 354 aa12.45□□□□□ -0.42
BRCA1-213ENST00000476777 PLA2G2CQ5R387 149 aa12.45□□□□□ -0.42
BRCA1-213ENST00000476777 STXBP5Q5T5C0 1151 aa12.45□□□□□ -0.42
BRCA1-213ENST00000476777 CACNA2D4Q7Z3S7 1137 aa12.45□□□□□ -0.42
BRCA1-213ENST00000476777 KBTBD6Q86V97 674 aa12.45□□□□□ -0.42
BRCA1-213ENST00000476777 TMC8Q8IU68 726 aa12.45□□□□□ -0.42
BRCA1-213ENST00000476777 GPIHBP1Q8IV16 184 aa12.45□□□□□ -0.42
BRCA1-213ENST00000476777 ARID3BQ8IVW6 561 aaPredicted RBP12.45□□□□□ -0.42
BRCA1-213ENST00000476777 ABCA7Q8IZY2 2146 aa12.45□□□□□ -0.42
BRCA1-213ENST00000476777 SYNPOQ8N3V7 929 aa12.45□□□□□ -0.42
BRCA1-213ENST00000476777 APPL2Q8NEU8 664 aa12.45□□□□□ -0.42
BRCA1-213ENST00000476777 BEST2Q8NFU1 509 aa12.45□□□□□ -0.42
BRCA1-213ENST00000476777 TTC8Q8TAM2 541 aa12.45□□□□□ -0.42
BRCA1-213ENST00000476777 GAB3Q8WWW8 586 aa12.45□□□□□ -0.42
BRCA1-213ENST00000476777 DDX12PQ92771 950 aa12.45□□□□□ -0.42
BRCA1-213ENST00000476777 C18orf25Q96B23 403 aaPredicted RBP12.45□□□□□ -0.42
BRCA1-213ENST00000476777 ZFYVE19Q96K21 471 aa12.45□□□□□ -0.42
BRCA1-213ENST00000476777 CCDC94Q9BW85 323 aaPredicted RBP12.45□□□□□ -0.42
BRCA1-213ENST00000476777 DNAJC25Q9H1X3 360 aa12.45□□□□□ -0.42
BRCA1-213ENST00000476777 CDT1Q9H211 546 aa12.45□□□□□ -0.42
BRCA1-213ENST00000476777 BRMS1Q9HCU9 246 aa12.45□□□□□ -0.42
BRCA1-213ENST00000476777 SH2B1Q9NRF2 756 aaPredicted RBP12.45□□□□□ -0.42
BRCA1-213ENST00000476777 PDRG1Q9NUG6 133 aa12.45□□□□□ -0.42
BRCA1-213ENST00000476777 YIPF1Q9Y548 306 aa12.45□□□□□ -0.42
BRCA1-213ENST00000476777 FREM2Q5SZK8 3169 aa12.45□□□□□ -0.42
BRCA1-213ENST00000476777 K7ERI5 159 aa12.44□□□□□ -0.42
BRCA1-213ENST00000476777 MEFVO15553 781 aaPredicted RBP12.44□□□□□ -0.42
BRCA1-213ENST00000476777 PFKFB2O60825 505 aa12.44□□□□□ -0.42
BRCA1-213ENST00000476777 RPP40O75818 363 aaKnown RBP12.44□□□□□ -0.42
BRCA1-213ENST00000476777 FDPSP14324 419 aaKnown RBP12.44□□□□□ -0.42
BRCA1-213ENST00000476777 MCM4P33991 863 aa12.44□□□□□ -0.42
BRCA1-213ENST00000476777 PKN3Q6P5Z2 889 aa12.44□□□□□ -0.42
BRCA1-213ENST00000476777 CENPQQ7L2Z9 268 aaPredicted RBP12.44□□□□□ -0.42
BRCA1-213ENST00000476777 FAM200AQ8TCP9 573 aa12.44□□□□□ -0.42
BRCA1-213ENST00000476777 WASF1Q92558 559 aa12.44□□□□□ -0.42
BRCA1-213ENST00000476777 IFT74Q96LB3 600 aa12.44□□□□□ -0.42
BRCA1-213ENST00000476777 TBC1D32Q96NH3 1257 aa12.44□□□□□ -0.42
BRCA1-213ENST00000476777 ACO2Q99798 780 aaKnown RBP12.44□□□□□ -0.42
BRCA1-213ENST00000476777 MKNK1Q9BUB5 465 aa12.44□□□□□ -0.42
BRCA1-213ENST00000476777 CRISPLD1Q9H336 500 aa12.44□□□□□ -0.42
BRCA1-213ENST00000476777 SMOC1Q9H4F8 434 aa12.44□□□□□ -0.42
BRCA1-213ENST00000476777 CNTN3Q9P232 1028 aa12.44□□□□□ -0.42
BRCA1-213ENST00000476777 TPCN1Q9ULQ1 816 aa12.44□□□□□ -0.42
BRCA1-213ENST00000476777 SETXQ7Z333 2677 aaKnown RBP12.44□□□□□ -0.42
BRCA1-213ENST00000476777 CCDC163A0A0D9SF12 145 aa12.43□□□□□ -0.42
BRCA1-213ENST00000476777 C1QTNF9BB2RNN3 333 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms