RNA–Protein interactions for RNA: ENST00000476467.1

PSMB4-204, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 2,067 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-204ENST00000476467 RPL9P32969 192 aaKnown RBP14.21□□□□□ -0.13
PSMB4-204ENST00000476467 MYL6P60660 151 aa14.21□□□□□ -0.13
PSMB4-204ENST00000476467 TRIM14Q14142 442 aa14.21□□□□□ -0.13
PSMB4-204ENST00000476467 C9orf50Q5SZB4 431 aa14.21□□□□□ -0.13
PSMB4-204ENST00000476467 ZNF280BQ86YH2 543 aa14.21□□□□□ -0.13
PSMB4-204ENST00000476467 HERC6Q8IVU3 1022 aa14.21□□□□□ -0.13
PSMB4-204ENST00000476467 LRRC52Q8N7C0 313 aa14.21□□□□□ -0.13
PSMB4-204ENST00000476467 DDX27Q96GQ7 796 aaKnown RBP14.21□□□□□ -0.13
PSMB4-204ENST00000476467 RNPC3Q96LT9 517 aaKnown RBP14.21□□□□□ -0.13
PSMB4-204ENST00000476467 ZNF560Q96MR9 790 aa14.21□□□□□ -0.13
PSMB4-204ENST00000476467 YME1L1Q96TA2 773 aa14.21□□□□□ -0.13
PSMB4-204ENST00000476467 LSM14BQ9BX40 385 aaKnown RBP14.21□□□□□ -0.13
PSMB4-204ENST00000476467 UBE2OQ9C0C9 1292 aaKnown RBP14.21□□□□□ -0.13
PSMB4-204ENST00000476467 CASTOR2A6NHX0 329 aa14.21□□□□□ -0.14
PSMB4-204ENST00000476467 PODXLO00592 558 aa14.21□□□□□ -0.14
PSMB4-204ENST00000476467 PIRO00625 290 aa14.21□□□□□ -0.14
PSMB4-204ENST00000476467 B4GALT3O60512 393 aa14.21□□□□□ -0.14
PSMB4-204ENST00000476467 DDHD2O94830 711 aa14.21□□□□□ -0.14
PSMB4-204ENST00000476467 STAU1O95793 577 aaKnown RBP14.21□□□□□ -0.14
PSMB4-204ENST00000476467 ASS1P00966 412 aaKnown RBP14.21□□□□□ -0.14
PSMB4-204ENST00000476467 TPM1P09493 284 aa14.21□□□□□ -0.14
PSMB4-204ENST00000476467 SLC9A1P19634 815 aa14.21□□□□□ -0.14
PSMB4-204ENST00000476467 PNPLA4P41247 253 aa14.21□□□□□ -0.14
PSMB4-204ENST00000476467 HTRA4P83105 476 aaPredicted RBP14.21□□□□□ -0.14
PSMB4-204ENST00000476467 SGSM1Q2NKQ1 1148 aa14.21□□□□□ -0.14
PSMB4-204ENST00000476467 ZNF699Q32M78 642 aa14.21□□□□□ -0.14
PSMB4-204ENST00000476467 SCARA3Q6AZY7 606 aa14.21□□□□□ -0.14
PSMB4-204ENST00000476467 COLGALT2Q8IYK4 626 aa14.21□□□□□ -0.14
PSMB4-204ENST00000476467 TAF4BQ92750 862 aa14.21□□□□□ -0.14
PSMB4-204ENST00000476467 PCMTD1Q96MG8 357 aaPredicted RBP14.21□□□□□ -0.14
PSMB4-204ENST00000476467 XYLT2Q9H1B5 865 aa14.21□□□□□ -0.14
PSMB4-204ENST00000476467 NRDE2Q9H7Z3 1164 aa14.21□□□□□ -0.14
PSMB4-204ENST00000476467 PLCB1Q9NQ66 1216 aa14.21□□□□□ -0.14
PSMB4-204ENST00000476467 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.21□□□□□ -0.14
PSMB4-204ENST00000476467 ADGRG1Q9Y653 693 aa14.21□□□□□ -0.14
PSMB4-204ENST00000476467 V9GYY5 206 aaPredicted RBP14.21□□□□□ -0.14
PSMB4-204ENST00000476467 PPEF2O14830 753 aa14.2□□□□□ -0.14
PSMB4-204ENST00000476467 CAPN15O75808 1086 aa14.2□□□□□ -0.14
PSMB4-204ENST00000476467 CCDC175P0C221 793 aa14.2□□□□□ -0.14
PSMB4-204ENST00000476467 KLK7P49862 253 aa14.2□□□□□ -0.14
PSMB4-204ENST00000476467 NOP14P78316 857 aaKnown RBP14.2□□□□□ -0.14
PSMB4-204ENST00000476467 SHHQ15465 462 aa14.2□□□□□ -0.14
PSMB4-204ENST00000476467 UPP1Q16831 310 aa14.2□□□□□ -0.14
PSMB4-204ENST00000476467 WDR44Q5JSH3 913 aa14.2□□□□□ -0.14
PSMB4-204ENST00000476467 LRRN4CLQ8ND94 238 aa14.2□□□□□ -0.14
PSMB4-204ENST00000476467 NT5C1BQ96P26 610 aa14.2□□□□□ -0.14
PSMB4-204ENST00000476467 ARID3AQ99856 593 aa14.2□□□□□ -0.14
PSMB4-204ENST00000476467 TMEM175Q9BSA9 504 aa14.2□□□□□ -0.14
PSMB4-204ENST00000476467 ZBED2Q9BTP6 218 aa14.2□□□□□ -0.14
PSMB4-204ENST00000476467 PI4K2AQ9BTU6 479 aa14.2□□□□□ -0.14
PSMB4-204ENST00000476467 VRTNQ9H8Y1 702 aa14.2□□□□□ -0.14
PSMB4-204ENST00000476467 SIX2Q9NPC8 291 aa14.2□□□□□ -0.14
PSMB4-204ENST00000476467 SCN1AP35498 2009 aa14.2□□□□□ -0.14
PSMB4-204ENST00000476467 RNF225M0QZC1 329 aaPredicted RBP14.19□□□□□ -0.14
PSMB4-204ENST00000476467 LRRN2O75325 713 aa14.19□□□□□ -0.14
PSMB4-204ENST00000476467 CLCNKBP51801 687 aa14.19□□□□□ -0.14
PSMB4-204ENST00000476467 MYO1EQ12965 1108 aa14.19□□□□□ -0.14
PSMB4-204ENST00000476467 BTG3Q14201 252 aaPredicted RBP14.19□□□□□ -0.14
PSMB4-204ENST00000476467 ELF2Q15723 593 aa14.19□□□□□ -0.14
PSMB4-204ENST00000476467 NEK11Q8NG66 645 aa14.19□□□□□ -0.14
PSMB4-204ENST00000476467 HPDLQ96IR7 371 aa14.19□□□□□ -0.14
PSMB4-204ENST00000476467 WDR24Q96S15 920 aa14.19□□□□□ -0.14
PSMB4-204ENST00000476467 FAM207AQ9NSI2 230 aaPredicted RBP14.19□□□□□ -0.14
PSMB4-204ENST00000476467 ABHD10Q9NUJ1 306 aa14.19□□□□□ -0.14
PSMB4-204ENST00000476467 CACNG4Q9UBN1 327 aa14.19□□□□□ -0.14
PSMB4-204ENST00000476467 APEX2Q9UBZ4 518 aa14.19□□□□□ -0.14
PSMB4-204ENST00000476467 DNAJB4Q9UDY4 337 aa14.19□□□□□ -0.14
PSMB4-204ENST00000476467 DAAM1Q9Y4D1 1078 aa14.19□□□□□ -0.14
PSMB4-204ENST00000476467 INSL6Q9Y581 213 aa14.19□□□□□ -0.14
PSMB4-204ENST00000476467 CLSTN1O94985 981 aa14.19□□□□□ -0.14
PSMB4-204ENST00000476467 TAF6P49848 677 aa14.19□□□□□ -0.14
PSMB4-204ENST00000476467 GNG11P61952 73 aa14.19□□□□□ -0.14
PSMB4-204ENST00000476467 SV2CQ496J9 727 aa14.19□□□□□ -0.14
PSMB4-204ENST00000476467 DPY19L2P1Q6NXN4 242 aa14.19□□□□□ -0.14
PSMB4-204ENST00000476467 RAD9AQ99638 391 aa14.19□□□□□ -0.14
PSMB4-204ENST00000476467 PAAF1Q9BRP4 392 aa14.19□□□□□ -0.14
PSMB4-204ENST00000476467 GANQ9H2C0 597 aa14.19□□□□□ -0.14
PSMB4-204ENST00000476467 CWH43Q9H720 699 aa14.19□□□□□ -0.14
PSMB4-204ENST00000476467 APOBEC3GQ9HC16 384 aaKnown RBP14.19□□□□□ -0.14
PSMB4-204ENST00000476467 HCSTQ9UBK5 93 aa14.19□□□□□ -0.14
PSMB4-204ENST00000476467 TMEM189-UBE2V1I3L0A0 370 aa14.18□□□□□ -0.14
PSMB4-204ENST00000476467 URI1O94763 535 aaPredicted RBP14.18□□□□□ -0.14
PSMB4-204ENST00000476467 RFX1P22670 979 aa14.18□□□□□ -0.14
PSMB4-204ENST00000476467 PAX3P23760 479 aa14.18□□□□□ -0.14
PSMB4-204ENST00000476467 CASQ1P31415 396 aa14.18□□□□□ -0.14
PSMB4-204ENST00000476467 FIGNQ5HY92 759 aa14.18□□□□□ -0.14
PSMB4-204ENST00000476467 ZNF667Q5HYK9 610 aa14.18□□□□□ -0.14
PSMB4-204ENST00000476467 KLHDC7AQ5VTJ3 777 aa14.18□□□□□ -0.14
PSMB4-204ENST00000476467 SPOPLQ6IQ16 392 aa14.18□□□□□ -0.14
PSMB4-204ENST00000476467 DCLRE1AQ6PJP8 1040 aa14.18□□□□□ -0.14
PSMB4-204ENST00000476467 TMTC1Q8IUR5 882 aa14.18□□□□□ -0.14
PSMB4-204ENST00000476467 IQCDQ96DY2 449 aa14.18□□□□□ -0.14
PSMB4-204ENST00000476467 FAXDC2Q96IV6 333 aa14.18□□□□□ -0.14
PSMB4-204ENST00000476467 NUP58Q9BVL2 599 aa14.18□□□□□ -0.14
PSMB4-204ENST00000476467 NIF3L1Q9GZT8 377 aa14.18□□□□□ -0.14
PSMB4-204ENST00000476467 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.18□□□□□ -0.143e-12■■■■□ 22.4
PSMB4-204ENST00000476467 NUB1Q9Y5A7 615 aa14.18□□□□□ -0.14
PSMB4-204ENST00000476467 TNRC18O15417 2968 aaPredicted RBP14.18□□□□□ -0.14
PSMB4-204ENST00000476467 TLL1O43897 1013 aa14.18□□□□□ -0.14
PSMB4-204ENST00000476467 NOL4O94818 638 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms