RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 ZNF292O60281 2723 aa11.8□□□□□ -0.52
CDRT1-205ENST00000475944 PDCD11Q14690 1871 aaKnown RBP11.8□□□□□ -0.52
CDRT1-205ENST00000475944 EP300Q09472 2414 aaPredicted RBP11.8□□□□□ -0.52
CDRT1-205ENST00000475944 SHISA7A6NL88 538 aa11.8□□□□□ -0.52
CDRT1-205ENST00000475944 M0QZQ0 153 aa11.8□□□□□ -0.52
CDRT1-205ENST00000475944 ZNF263O14978 683 aa11.8□□□□□ -0.52
CDRT1-205ENST00000475944 MEFVO15553 781 aaPredicted RBP11.8□□□□□ -0.52
CDRT1-205ENST00000475944 XPOTO43592 962 aaKnown RBP11.8□□□□□ -0.52
CDRT1-205ENST00000475944 CLTAP09496 248 aa11.8□□□□□ -0.52
CDRT1-205ENST00000475944 CXCL8P10145 99 aa11.8□□□□□ -0.52
CDRT1-205ENST00000475944 MAPTP10636 758 aaKnown RBP11.8□□□□□ -0.52
CDRT1-205ENST00000475944 CYP3A5P20815 502 aa11.8□□□□□ -0.52
CDRT1-205ENST00000475944 LRPAP1P30533 357 aa11.8□□□□□ -0.52
CDRT1-205ENST00000475944 CCR3P51677 355 aa11.8□□□□□ -0.52
CDRT1-205ENST00000475944 PPP2R3AQ06190 1150 aa11.8□□□□□ -0.52
CDRT1-205ENST00000475944 KYAT1Q16773 422 aa11.8□□□□□ -0.52
CDRT1-205ENST00000475944 RSPO4Q2I0M5 234 aaPredicted RBP11.8□□□□□ -0.52
CDRT1-205ENST00000475944 SEZ6Q53EL9 994 aa11.8□□□□□ -0.52
CDRT1-205ENST00000475944 RILPL1Q5EBL4 403 aa11.8□□□□□ -0.52
CDRT1-205ENST00000475944 ERICH6BQ5W0A0 696 aa11.8□□□□□ -0.52
CDRT1-205ENST00000475944 RNF19BQ6ZMZ0 732 aa11.8□□□□□ -0.52
CDRT1-205ENST00000475944 MAMSTRQ6ZN01 415 aa11.8□□□□□ -0.52
CDRT1-205ENST00000475944 USP37Q86T82 979 aa11.8□□□□□ -0.52
CDRT1-205ENST00000475944 MAP4K3Q8IVH8 894 aa11.8□□□□□ -0.52
CDRT1-205ENST00000475944 MFSD6LQ8IWD5 586 aa11.8□□□□□ -0.52
CDRT1-205ENST00000475944 BEST2Q8NFU1 509 aa11.8□□□□□ -0.52
CDRT1-205ENST00000475944 FAM3CQ92520 227 aa11.8□□□□□ -0.52
CDRT1-205ENST00000475944 E2F7Q96AV8 911 aa11.8□□□□□ -0.52
CDRT1-205ENST00000475944 KIF12Q96FN5 646 aa11.8□□□□□ -0.52
CDRT1-205ENST00000475944 MSANTD3Q96H12 275 aa11.8□□□□□ -0.52
CDRT1-205ENST00000475944 ZSWIM3Q96MP5 696 aa11.8□□□□□ -0.52
CDRT1-205ENST00000475944 GMEB2Q9UKD1 530 aa11.8□□□□□ -0.52
CDRT1-205ENST00000475944 RAB23Q9ULC3 237 aa11.8□□□□□ -0.52
CDRT1-205ENST00000475944 UBQLN1Q9UMX0 589 aaKnown RBP11.8□□□□□ -0.52
CDRT1-205ENST00000475944 YIPF1Q9Y548 306 aa11.8□□□□□ -0.52
CDRT1-205ENST00000475944 PIAS3Q9Y6X2 628 aa11.8□□□□□ -0.52
CDRT1-205ENST00000475944 OTOGLQ3ZCN5 2332 aa11.79□□□□□ -0.52
CDRT1-205ENST00000475944 TTC26A0AVF1 554 aa11.79□□□□□ -0.52
CDRT1-205ENST00000475944 OR6C75A6NL08 312 aa11.79□□□□□ -0.52
CDRT1-205ENST00000475944 PRR5-ARHGAP8B1AHC4 643 aa11.79□□□□□ -0.52
CDRT1-205ENST00000475944 NRG2O14511 850 aaPredicted RBP11.79□□□□□ -0.52
CDRT1-205ENST00000475944 MOSPD3O75425 235 aa11.79□□□□□ -0.52
CDRT1-205ENST00000475944 OAZ2O95190 189 aa11.79□□□□□ -0.52
CDRT1-205ENST00000475944 GJA1P17302 382 aa11.79□□□□□ -0.52
CDRT1-205ENST00000475944 AARSP49588 968 aaKnown RBP eCLIP11.79□□□□□ -0.52
CDRT1-205ENST00000475944 EPHB3P54753 998 aa11.79□□□□□ -0.52
CDRT1-205ENST00000475944 SLC12A3P55017 1021 aa11.79□□□□□ -0.52
CDRT1-205ENST00000475944 ARHGAP8P85298 464 aa11.79□□□□□ -0.52
CDRT1-205ENST00000475944 ATP2C1P98194 919 aaPredicted RBP11.79□□□□□ -0.52
CDRT1-205ENST00000475944 LMNB2Q03252 620 aa11.79□□□□□ -0.52
CDRT1-205ENST00000475944 TEAD2Q15562 447 aa11.79□□□□□ -0.52
CDRT1-205ENST00000475944 MCTP1Q6DN14 999 aa11.79□□□□□ -0.52
CDRT1-205ENST00000475944 C1orf228Q6PIY5 440 aa11.79□□□□□ -0.52
CDRT1-205ENST00000475944 DSTYKQ6XUX3 929 aa11.79□□□□□ -0.52
CDRT1-205ENST00000475944 YAF2Q8IY57 180 aa11.79□□□□□ -0.52
CDRT1-205ENST00000475944 ZNF687Q8N1G0 1237 aa11.79□□□□□ -0.52
CDRT1-205ENST00000475944 CSGALNACT1Q8TDX6 532 aa11.79□□□□□ -0.52
CDRT1-205ENST00000475944 TSPAN18Q96SJ8 248 aa11.79□□□□□ -0.52
CDRT1-205ENST00000475944 LMAN1LQ9HAT1 526 aa11.79□□□□□ -0.52
CDRT1-205ENST00000475944 ODF2LQ9ULJ1 636 aa11.79□□□□□ -0.52
CDRT1-205ENST00000475944 TIMM13Q9Y5L4 95 aaPredicted RBP11.79□□□□□ -0.52
CDRT1-205ENST00000475944 COL4A2P08572 1712 aa11.79□□□□□ -0.52
CDRT1-205ENST00000475944 TICRRQ7Z2Z1 1910 aa11.78□□□□□ -0.52
CDRT1-205ENST00000475944 DMXL1Q9Y485 3027 aa11.78□□□□□ -0.52
CDRT1-205ENST00000475944 CACNA1AO00555 2505 aa11.78□□□□□ -0.52
CDRT1-205ENST00000475944 HEPACAM2A8MVW5 462 aa11.78□□□□□ -0.52
CDRT1-205ENST00000475944 PLA2G4BP0C869 781 aa11.78□□□□□ -0.52
CDRT1-205ENST00000475944 SCP2P22307 547 aa11.78□□□□□ -0.52
CDRT1-205ENST00000475944 VIPR2P41587 438 aa11.78□□□□□ -0.52
CDRT1-205ENST00000475944 ALDH1A3P47895 512 aa11.78□□□□□ -0.52
CDRT1-205ENST00000475944 LIG4P49917 911 aa11.78□□□□□ -0.52
CDRT1-205ENST00000475944 NCKAP1LP55160 1127 aa11.78□□□□□ -0.52
CDRT1-205ENST00000475944 MLLT6P55198 1093 aaPredicted RBP11.78□□□□□ -0.52
CDRT1-205ENST00000475944 SPAG1Q07617 926 aa11.78□□□□□ -0.52
CDRT1-205ENST00000475944 GPR17Q13304 367 aa11.78□□□□□ -0.52
CDRT1-205ENST00000475944 ZBTB6Q15916 424 aa11.78□□□□□ -0.52
CDRT1-205ENST00000475944 HAUS6Q7Z4H7 955 aa11.78□□□□□ -0.52
CDRT1-205ENST00000475944 SHKBP1Q8TBC3 707 aa11.78□□□□□ -0.52
CDRT1-205ENST00000475944 KCNN1Q92952 543 aa11.78□□□□□ -0.52
CDRT1-205ENST00000475944 PGLYRP2Q96PD5 576 aa11.78□□□□□ -0.52
CDRT1-205ENST00000475944 PNMA5Q96PV4 448 aa11.78□□□□□ -0.52
CDRT1-205ENST00000475944 PLIN2Q99541 437 aa11.78□□□□□ -0.52
CDRT1-205ENST00000475944 HAPLN2Q9GZV7 340 aa11.78□□□□□ -0.52
CDRT1-205ENST00000475944 C8orf33Q9H7E9 229 aaPredicted RBP11.78□□□□□ -0.52
CDRT1-205ENST00000475944 RPF1Q9H9Y2 349 aaKnown RBP11.78□□□□□ -0.52
CDRT1-205ENST00000475944 CDV3Q9UKY7 258 aaKnown RBP11.78□□□□□ -0.52
CDRT1-205ENST00000475944 USP18Q9UMW8 372 aa11.78□□□□□ -0.52
CDRT1-205ENST00000475944 ASB3Q9Y575 518 aa11.78□□□□□ -0.52
CDRT1-205ENST00000475944 MYH11P35749 1972 aa11.78□□□□□ -0.52
CDRT1-205ENST00000475944 A0A1W2PRU2 124 aa11.77□□□□□ -0.53
CDRT1-205ENST00000475944 VWA3AA6NCI4 1184 aa11.77□□□□□ -0.53
CDRT1-205ENST00000475944 LACTBL1A8MY62 500 aa11.77□□□□□ -0.53
CDRT1-205ENST00000475944 ARNTLO00327 626 aa11.77□□□□□ -0.53
CDRT1-205ENST00000475944 HNRNPDLO14979 420 aaKnown RBP11.77□□□□□ -0.53
CDRT1-205ENST00000475944 OGTO15294 1046 aa11.77□□□□□ -0.53
CDRT1-205ENST00000475944 CHADO15335 359 aa11.77□□□□□ -0.53
CDRT1-205ENST00000475944 FGF19O95750 216 aa11.77□□□□□ -0.53
CDRT1-205ENST00000475944 OR4Q2P0C623 313 aa11.77□□□□□ -0.53
CDRT1-205ENST00000475944 CHRNB1P11230 501 aa11.77□□□□□ -0.53
CDRT1-205ENST00000475944 ODC1P11926 461 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms