RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 AKR1B15C9JRZ8 316 aaPredicted RBP6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 CASQ2O14958 399 aaPredicted RBP6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 CETN3O15182 167 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 TBX1O43435 398 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 HNRNPCL1O60812 293 aaKnown RBP6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 CUTAO60888 179 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 SERPINB7O75635 380 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 RGS9O75916 674 aaPredicted RBP6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 TSPAN9O75954 239 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 UBOX5O94941 541 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 LMNAP02545 664 aaKnown RBP6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 FGFR1P11362 822 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 CTRB1P17538 263 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 ATF3P18847 181 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 RXRAP19793 462 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 PRKAR1BP31321 381 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 CHKAP35790 457 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 POLD2P49005 469 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 ADARP55265 1226 aaKnown RBP6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 SUMO1P63165 101 aaKnown RBP6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 RING1Q06587 406 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 SP140Q13342 867 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 PRKG1Q13976 671 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 CYLC2Q14093 348 aaPredicted RBP6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 SF3B3Q15393 1217 aaKnown RBP6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 GRIK5Q16478 980 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 SKIDA1Q1XH10 827 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 PPM1JQ5JR12 505 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 ZNF772Q68DY9 489 aaPredicted RBP6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 HEATR6Q6AI08 1181 aaKnown RBP6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 CTRB2Q6GPI1 263 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 OTUD7BQ6GQQ9 843 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 OR52E8Q6IFG1 317 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 NEK5Q6P3R8 708 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 TMEM154Q6P9G4 183 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 ZNF449Q6P9G9 518 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 CORO6Q6QEF8 472 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 UNC5DQ6UXZ4 953 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 NSMFQ6X4W1 530 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 RUFY3Q7L099 469 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 SLC51BQ86UW2 128 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 CROCCP3Q8IVE0 287 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 MCATQ8IVS2 390 aaKnown RBP6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 SLFN12Q8IYM2 578 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 CHPFQ8IZ52 775 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 ZGPATQ8N5A5 531 aaKnown RBP6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 ANKRD44Q8N8A2 993 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 LSMEM1Q8N8F7 131 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 CCDC63Q8NA47 563 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 NPLOC4Q8TAT6 608 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 SLC7A14Q8TBB6 771 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 COG1Q8WTW3 980 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 STARD8Q92502 1023 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 MTMR8Q96EF0 704 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 TMEM87BQ96K49 555 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 NSMCE3Q96MG7 304 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 RBM14Q96PK6 669 aaKnown RBP6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 VPS16Q9H269 839 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 DNAJC18Q9H819 358 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 TRPC7Q9HCX4 862 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 CD93Q9NPY3 652 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 MRGBPQ9NV56 204 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 ZIM2Q9NZV7 527 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 MTRF1LQ9UGC7 380 aaKnown RBP6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 HDAC9Q9UKV0 1011 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 CFL2Q9Y281 166 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 PCDHB4Q9Y5E5 795 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 SLIT1O75093 1534 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 EFCAB6Q5THR3 1501 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 ZNF536O15090 1300 aa6.36□□□□□ -1.39
ECHDC1-215ENST00000475319 MACROD2A1Z1Q3 448 aa6.36□□□□□ -1.39
ECHDC1-215ENST00000475319 ERVV-2B6SEH9 535 aa6.36□□□□□ -1.39
ECHDC1-215ENST00000475319 FSCN2O14926 492 aa6.36□□□□□ -1.39
ECHDC1-215ENST00000475319 AKAP10O43572 662 aa6.36□□□□□ -1.39
ECHDC1-215ENST00000475319 EIF4EBP3O60516 100 aaPredicted RBP6.36□□□□□ -1.39
ECHDC1-215ENST00000475319 GUCY1B2O75343 617 aa6.36□□□□□ -1.39
ECHDC1-215ENST00000475319 DGKIO75912 1065 aa6.36□□□□□ -1.39
ECHDC1-215ENST00000475319 GLRX3O76003 335 aaKnown RBP6.36□□□□□ -1.39
ECHDC1-215ENST00000475319 ZNF202O95125 648 aa6.36□□□□□ -1.39
ECHDC1-215ENST00000475319 OXSR1O95747 527 aaPredicted RBP6.36□□□□□ -1.39
ECHDC1-215ENST00000475319 OLFM2O95897 454 aa6.36□□□□□ -1.39
ECHDC1-215ENST00000475319 SFTPCP11686 197 aa6.36□□□□□ -1.39
ECHDC1-215ENST00000475319 ZKSCAN1P17029 563 aaPredicted RBP6.36□□□□□ -1.39
ECHDC1-215ENST00000475319 M6PRP20645 277 aa6.36□□□□□ -1.39
ECHDC1-215ENST00000475319 CALB2P22676 271 aa6.36□□□□□ -1.39
ECHDC1-215ENST00000475319 LTKP29376 864 aa6.36□□□□□ -1.39
ECHDC1-215ENST00000475319 PCK1P35558 622 aa6.36□□□□□ -1.39
ECHDC1-215ENST00000475319 YARSP54577 528 aaKnown RBP6.36□□□□□ -1.39
ECHDC1-215ENST00000475319 OLR1P78380 273 aa6.36□□□□□ -1.39
ECHDC1-215ENST00000475319 ITKQ08881 620 aa6.36□□□□□ -1.39
ECHDC1-215ENST00000475319 IDI1Q13907 227 aa6.36□□□□□ -1.39
ECHDC1-215ENST00000475319 UBE4AQ14139 1066 aa6.36□□□□□ -1.39
ECHDC1-215ENST00000475319 HLTFQ14527 1009 aaKnown RBP eCLIP6.36□□□□□ -1.39
ECHDC1-215ENST00000475319 PSMD6Q15008 389 aa6.36□□□□□ -1.39
ECHDC1-215ENST00000475319 PCBP1Q15365 356 aaKnown RBP eCLIP6.36□□□□□ -1.39
ECHDC1-215ENST00000475319 PTGISQ16647 500 aa6.36□□□□□ -1.39
ECHDC1-215ENST00000475319 ANO4Q32M45 955 aa6.36□□□□□ -1.39
ECHDC1-215ENST00000475319 HIBCHQ6NVY1 386 aaPredicted RBP6.36□□□□□ -1.39
ECHDC1-215ENST00000475319 PKN3Q6P5Z2 889 aa6.36□□□□□ -1.39
ECHDC1-215ENST00000475319 KDM7AQ6ZMT4 941 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 1001 ms