RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 TEAD2Q15562 447 aa13.77□□□□□ -0.21
SKA3-206ENST00000475251 TRIP11Q15643 1979 aa13.77□□□□□ -0.21
SKA3-206ENST00000475251 CEP68Q76N32 757 aa13.77□□□□□ -0.21
SKA3-206ENST00000475251 RALGPS2Q86X27 583 aaPredicted RBP13.77□□□□□ -0.21
SKA3-206ENST00000475251 HS6ST3Q8IZP7 471 aa13.77□□□□□ -0.21
SKA3-206ENST00000475251 DRC1Q96MC2 740 aa13.77□□□□□ -0.21
SKA3-206ENST00000475251 ZMAT2Q96NC0 199 aaKnown RBP13.77□□□□□ -0.21
SKA3-206ENST00000475251 PTPRHQ9HD43 1115 aa13.77□□□□□ -0.21
SKA3-206ENST00000475251 CEP72Q9P209 647 aa13.77□□□□□ -0.21
SKA3-206ENST00000475251 KCNG1Q9UIX4 513 aa13.77□□□□□ -0.21
SKA3-206ENST00000475251 RBM19Q9Y4C8 960 aaKnown RBP13.77□□□□□ -0.21
SKA3-206ENST00000475251 DPYSL4O14531 572 aa13.76□□□□□ -0.21
SKA3-206ENST00000475251 MOSPD3O75425 235 aa13.76□□□□□ -0.21
SKA3-206ENST00000475251 FGF19O95750 216 aa13.76□□□□□ -0.21
SKA3-206ENST00000475251 LIMK1P53667 647 aa13.76□□□□□ -0.21
SKA3-206ENST00000475251 EPHB3P54753 998 aa13.76□□□□□ -0.21
SKA3-206ENST00000475251 PEX3P56589 373 aa13.76□□□□□ -0.21
SKA3-206ENST00000475251 YWHAHQ04917 246 aaPredicted RBP13.76□□□□□ -0.21
SKA3-206ENST00000475251 GAS6Q14393 721 aa13.76□□□□□ -0.21
SKA3-206ENST00000475251 AASDHQ4L235 1098 aaPredicted RBP13.76□□□□□ -0.21
SKA3-206ENST00000475251 ARHGAP29Q52LW3 1261 aa13.76□□□□□ -0.21
SKA3-206ENST00000475251 MPZL3Q6UWV2 235 aa13.76□□□□□ -0.21
SKA3-206ENST00000475251 C12orf50Q8NA57 414 aaPredicted RBP13.76□□□□□ -0.21
SKA3-206ENST00000475251 NSUN7Q8NE18 718 aaKnown RBP13.76□□□□□ -0.21
SKA3-206ENST00000475251 TBC1D32Q96NH3 1257 aa13.76□□□□□ -0.21
SKA3-206ENST00000475251 RAB34Q9BZG1 259 aa13.76□□□□□ -0.21
SKA3-206ENST00000475251 C17orf75Q9HAS0 396 aa13.76□□□□□ -0.21
SKA3-206ENST00000475251 ANGPTL2Q9UKU9 493 aa13.76□□□□□ -0.21
SKA3-206ENST00000475251 PCDHB8Q9UN66 801 aa13.76□□□□□ -0.21
SKA3-206ENST00000475251 YIPF1Q9Y548 306 aa13.76□□□□□ -0.21
SKA3-206ENST00000475251 PDCD11Q14690 1871 aaKnown RBP13.76□□□□□ -0.21
SKA3-206ENST00000475251 F5P12259 2224 aa13.75□□□□□ -0.21
SKA3-206ENST00000475251 MYBPHLA2RUH7 354 aa13.75□□□□□ -0.21
SKA3-206ENST00000475251 SLC38A8A6NNN8 435 aa13.75□□□□□ -0.21
SKA3-206ENST00000475251 SPECC1L-ADORA2AF8WAN1 911 aa13.75□□□□□ -0.21
SKA3-206ENST00000475251 K7ESF4 209 aa13.75□□□□□ -0.21
SKA3-206ENST00000475251 DTNBO60941 627 aa13.75□□□□□ -0.21
SKA3-206ENST00000475251 GJA1P17302 382 aa13.75□□□□□ -0.21
SKA3-206ENST00000475251 CTHP32929 405 aa13.75□□□□□ -0.21
SKA3-206ENST00000475251 ALDH1A3P47895 512 aa13.75□□□□□ -0.21
SKA3-206ENST00000475251 NPTX2P47972 431 aa13.75□□□□□ -0.21
SKA3-206ENST00000475251 STRN3Q13033 797 aa13.75□□□□□ -0.21
SKA3-206ENST00000475251 PTPAQ15257 358 aa13.75□□□□□ -0.21
SKA3-206ENST00000475251 HEATR6Q6AI08 1181 aaKnown RBP13.75□□□□□ -0.21
SKA3-206ENST00000475251 USP37Q86T82 979 aa13.75□□□□□ -0.21
SKA3-206ENST00000475251 WDR5BQ86VZ2 330 aa13.75□□□□□ -0.21
SKA3-206ENST00000475251 FAM160A2Q8N612 972 aaPredicted RBP13.75□□□□□ -0.21
SKA3-206ENST00000475251 NECAB1Q8N987 351 aa13.75□□□□□ -0.21
SKA3-206ENST00000475251 BEST2Q8NFU1 509 aa13.75□□□□□ -0.21
SKA3-206ENST00000475251 SHKBP1Q8TBC3 707 aa13.75□□□□□ -0.21
SKA3-206ENST00000475251 LOXL4Q96JB6 756 aa13.75□□□□□ -0.21
SKA3-206ENST00000475251 TARS2Q9BW92 718 aaKnown RBP13.75□□□□□ -0.21
SKA3-206ENST00000475251 KMT5AQ9NQR1 393 aa13.75□□□□□ -0.21
SKA3-206ENST00000475251 OBP2AQ9NY56 170 aa13.75□□□□□ -0.21
SKA3-206ENST00000475251 ARHGAP28Q9P2N2 729 aa13.75□□□□□ -0.21
SKA3-206ENST00000475251 ASB3Q9Y575 518 aa13.75□□□□□ -0.21
SKA3-206ENST00000475251 CITO14578 2027 aa13.74□□□□□ -0.21
SKA3-206ENST00000475251 A0A1W2PRU2 124 aa13.74□□□□□ -0.21
SKA3-206ENST00000475251 OR6C75A6NL08 312 aa13.74□□□□□ -0.21
SKA3-206ENST00000475251 NRG2O14511 850 aaPredicted RBP13.74□□□□□ -0.21
SKA3-206ENST00000475251 OAZ2O95190 189 aa13.74□□□□□ -0.21
SKA3-206ENST00000475251 PROZP22891 400 aa13.74□□□□□ -0.21
SKA3-206ENST00000475251 FOSBP53539 338 aa13.74□□□□□ -0.21
SKA3-206ENST00000475251 PLCB2Q00722 1185 aa13.74□□□□□ -0.21
SKA3-206ENST00000475251 ME3Q16798 604 aa13.74□□□□□ -0.21
SKA3-206ENST00000475251 ARHGAP15Q53QZ3 475 aa13.74□□□□□ -0.21
SKA3-206ENST00000475251 RNF19BQ6ZMZ0 732 aa13.74□□□□□ -0.21
SKA3-206ENST00000475251 ITIH5Q86UX2 942 aa13.74□□□□□ -0.21
SKA3-206ENST00000475251 ARID3BQ8IVW6 561 aaPredicted RBP13.74□□□□□ -0.21
SKA3-206ENST00000475251 C18orf25Q96B23 403 aaPredicted RBP13.74□□□□□ -0.21
SKA3-206ENST00000475251 TIPINQ9BVW5 301 aa13.74□□□□□ -0.21
SKA3-206ENST00000475251 DDX19AQ9NUU7 478 aaKnown RBP13.74□□□□□ -0.21
SKA3-206ENST00000475251 LRWD1Q9UFC0 647 aa13.74□□□□□ -0.21
SKA3-206ENST00000475251 KIAA1024Q9UPX6 916 aa13.74□□□□□ -0.21
SKA3-206ENST00000475251 DNM3Q9UQ16 869 aa13.74□□□□□ -0.21
SKA3-206ENST00000475251 RALGAPA1Q6GYQ0 2036 aa13.74□□□□□ -0.21
SKA3-206ENST00000475251 SPTBN2O15020 2390 aa13.73□□□□□ -0.21
SKA3-206ENST00000475251 CCDC163A0A0D9SF12 145 aa13.73□□□□□ -0.21
SKA3-206ENST00000475251 M0QZQ0 153 aa13.73□□□□□ -0.21
SKA3-206ENST00000475251 XPOTO43592 962 aaKnown RBP13.73□□□□□ -0.21
SKA3-206ENST00000475251 GDF9O60383 454 aa13.73□□□□□ -0.21
SKA3-206ENST00000475251 HIP1RO75146 1068 aa13.73□□□□□ -0.21
SKA3-206ENST00000475251 TOM1L1O75674 476 aa13.73□□□□□ -0.21
SKA3-206ENST00000475251 HARSP12081 509 aaKnown RBP13.73□□□□□ -0.21
SKA3-206ENST00000475251 TRAPPC10P48553 1259 aa13.73□□□□□ -0.21
SKA3-206ENST00000475251 SRSF5Q13243 272 aaKnown RBP13.73□□□□□ -0.21
SKA3-206ENST00000475251 GPR17Q13304 367 aa13.73□□□□□ -0.21
SKA3-206ENST00000475251 PDIA5Q14554 519 aa13.73□□□□□ -0.21
SKA3-206ENST00000475251 NOLC1Q14978 699 aaKnown RBP eCLIP13.73□□□□□ -0.21
SKA3-206ENST00000475251 ZNF174Q15697 407 aa13.73□□□□□ -0.21
SKA3-206ENST00000475251 Q6ZS52 159 aa13.73□□□□□ -0.21
SKA3-206ENST00000475251 FOXP1Q9H334 677 aaPredicted RBP13.73□□□□□ -0.21
SKA3-206ENST00000475251 PLEKHA5Q9HAU0 1116 aa13.73□□□□□ -0.21
SKA3-206ENST00000475251 POLD4Q9HCU8 107 aa13.73□□□□□ -0.21
SKA3-206ENST00000475251 RBM12Q9NTZ6 932 aaKnown RBP13.73□□□□□ -0.21
SKA3-206ENST00000475251 THG1LQ9NWX6 298 aaKnown RBP13.73□□□□□ -0.21
SKA3-206ENST00000475251 ANKFY1Q9P2R3 1169 aa13.73□□□□□ -0.21
SKA3-206ENST00000475251 ZMYM5Q9UJ78 669 aa13.73□□□□□ -0.21
SKA3-206ENST00000475251 NOL7Q9UMY1 257 aaKnown RBP13.73□□□□□ -0.21
SKA3-206ENST00000475251 NCANO14594 1321 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms