RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 C3orf58Q8NDZ4 430 aa10.77□□□□□ -0.69
COL8A1-206ENST00000474648 TAF4BQ92750 862 aa10.77□□□□□ -0.69
COL8A1-206ENST00000474648 HPDLQ96IR7 371 aa10.77□□□□□ -0.69
COL8A1-206ENST00000474648 UROC1Q96N76 676 aa10.77□□□□□ -0.69
COL8A1-206ENST00000474648 FAM193BQ96PV7 902 aaPredicted RBP10.77□□□□□ -0.69
COL8A1-206ENST00000474648 YME1L1Q96TA2 773 aa10.77□□□□□ -0.69
COL8A1-206ENST00000474648 TMEM175Q9BSA9 504 aa10.77□□□□□ -0.69
COL8A1-206ENST00000474648 ZBED2Q9BTP6 218 aa10.77□□□□□ -0.69
COL8A1-206ENST00000474648 PLCB1Q9NQ66 1216 aa10.77□□□□□ -0.69
COL8A1-206ENST00000474648 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.77□□□□□ -0.69
COL8A1-206ENST00000474648 GCNT4Q9P109 453 aa10.77□□□□□ -0.69
COL8A1-206ENST00000474648 INSL6Q9Y581 213 aa10.77□□□□□ -0.69
COL8A1-206ENST00000474648 NUB1Q9Y5A7 615 aa10.77□□□□□ -0.69
COL8A1-206ENST00000474648 MICAL3Q7RTP6 2002 aa10.77□□□□□ -0.69
COL8A1-206ENST00000474648 TNRC18O15417 2968 aaPredicted RBP10.76□□□□□ -0.69
COL8A1-206ENST00000474648 LCHNA4D1U4 455 aa10.76□□□□□ -0.69
COL8A1-206ENST00000474648 TMEM189-UBE2V1I3L0A0 370 aa10.76□□□□□ -0.69
COL8A1-206ENST00000474648 RNF225M0QZC1 329 aaPredicted RBP10.76□□□□□ -0.69
COL8A1-206ENST00000474648 NRP1O14786 923 aa10.76□□□□□ -0.69
COL8A1-206ENST00000474648 TLL1O43897 1013 aa10.76□□□□□ -0.69
COL8A1-206ENST00000474648 ZC3H11AO75152 810 aaKnown RBP eCLIP10.76□□□□□ -0.69
COL8A1-206ENST00000474648 ARHGEF15O94989 841 aa10.76□□□□□ -0.69
COL8A1-206ENST00000474648 EFEMP2O95967 443 aa10.76□□□□□ -0.69
COL8A1-206ENST00000474648 ITGB1P05556 798 aa10.76□□□□□ -0.69
COL8A1-206ENST00000474648 MYOGP15173 224 aa10.76□□□□□ -0.69
COL8A1-206ENST00000474648 PIK3CAP42336 1068 aa10.76□□□□□ -0.69
COL8A1-206ENST00000474648 OR1G1P47890 313 aa10.76□□□□□ -0.69
COL8A1-206ENST00000474648 AARSP49588 968 aaKnown RBP eCLIP10.76□□□□□ -0.69
COL8A1-206ENST00000474648 BCAR1P56945 870 aa10.76□□□□□ -0.69
COL8A1-206ENST00000474648 MLLT1Q03111 559 aaPredicted RBP10.76□□□□□ -0.69
COL8A1-206ENST00000474648 GJB7Q6PEY0 223 aa10.76□□□□□ -0.69
COL8A1-206ENST00000474648 LIMS2Q7Z4I7 341 aa10.76□□□□□ -0.69
COL8A1-206ENST00000474648 BCL7CQ8WUZ0 217 aaPredicted RBP10.76□□□□□ -0.69
COL8A1-206ENST00000474648 LSM14BQ9BX40 385 aaKnown RBP10.76□□□□□ -0.69
COL8A1-206ENST00000474648 NAA15Q9BXJ9 866 aaKnown RBP10.76□□□□□ -0.69
COL8A1-206ENST00000474648 GANQ9H2C0 597 aa10.76□□□□□ -0.69
COL8A1-206ENST00000474648 MARCH5Q9NX47 278 aa10.76□□□□□ -0.69
COL8A1-206ENST00000474648 GDAP2Q9NXN4 497 aa10.76□□□□□ -0.69
COL8A1-206ENST00000474648 AJAP1Q9UKB5 411 aaPredicted RBP10.76□□□□□ -0.69
COL8A1-206ENST00000474648 POLIQ9UNA4 740 aa10.76□□□□□ -0.69
COL8A1-206ENST00000474648 FAN1Q9Y2M0 1017 aa10.76□□□□□ -0.69
COL8A1-206ENST00000474648 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.75□□□□□ -0.69
COL8A1-206ENST00000474648 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.75□□□□□ -0.69
COL8A1-206ENST00000474648 KPNA7A9QM74 516 aa10.75□□□□□ -0.69
COL8A1-206ENST00000474648 NT5C1B-RDH14C9J2C7 533 aa10.75□□□□□ -0.69
COL8A1-206ENST00000474648 B3GAT3O94766 335 aa10.75□□□□□ -0.69
COL8A1-206ENST00000474648 KIF4AO95239 1232 aa10.75□□□□□ -0.69
COL8A1-206ENST00000474648 TPM3P06753 285 aa10.75□□□□□ -0.69
COL8A1-206ENST00000474648 PBX3P40426 434 aa10.75□□□□□ -0.69
COL8A1-206ENST00000474648 PNPLA4P41247 253 aa10.75□□□□□ -0.69
COL8A1-206ENST00000474648 TAF6P49848 677 aa10.75□□□□□ -0.69
COL8A1-206ENST00000474648 MYO1EQ12965 1108 aa10.75□□□□□ -0.69
COL8A1-206ENST00000474648 TBX2Q13207 712 aaPredicted RBP10.75□□□□□ -0.69
COL8A1-206ENST00000474648 ZNF699Q32M78 642 aa10.75□□□□□ -0.69
COL8A1-206ENST00000474648 WDR72Q3MJ13 1102 aa10.75□□□□□ -0.69
COL8A1-206ENST00000474648 TIGD5Q53EQ6 642 aa10.75□□□□□ -0.69
COL8A1-206ENST00000474648 WDR44Q5JSH3 913 aa10.75□□□□□ -0.69
COL8A1-206ENST00000474648 IQCEQ6IPM2 695 aa10.75□□□□□ -0.69
COL8A1-206ENST00000474648 KCNT2Q6UVM3 1135 aa10.75□□□□□ -0.69
COL8A1-206ENST00000474648 RRAGAQ7L523 313 aa10.75□□□□□ -0.69
COL8A1-206ENST00000474648 TMEM173Q86WV6 379 aaPredicted RBP10.75□□□□□ -0.69
COL8A1-206ENST00000474648 FIBCD1Q8N539 461 aa10.75□□□□□ -0.69
COL8A1-206ENST00000474648 CLP1Q92989 425 aaKnown RBP10.75□□□□□ -0.69
COL8A1-206ENST00000474648 KAT5Q92993 513 aa10.75□□□□□ -0.69
COL8A1-206ENST00000474648 FAXDC2Q96IV6 333 aa10.75□□□□□ -0.69
COL8A1-206ENST00000474648 KREMEN1Q96MU8 473 aa10.75□□□□□ -0.69
COL8A1-206ENST00000474648 NT5C1BQ96P26 610 aa10.75□□□□□ -0.69
COL8A1-206ENST00000474648 COLEC11Q9BWP8 271 aa10.75□□□□□ -0.69
COL8A1-206ENST00000474648 TTYH3Q9C0H2 523 aa10.75□□□□□ -0.69
COL8A1-206ENST00000474648 SDCBP2Q9H190 292 aa10.75□□□□□ -0.69
COL8A1-206ENST00000474648 UBE2TQ9NPD8 197 aaPredicted RBP10.75□□□□□ -0.69
COL8A1-206ENST00000474648 FAM207AQ9NSI2 230 aaPredicted RBP10.75□□□□□ -0.69
COL8A1-206ENST00000474648 PRG3Q9Y2Y8 225 aaPredicted RBP10.75□□□□□ -0.69
COL8A1-206ENST00000474648 ITIH6Q6UXX5 1313 aa10.75□□□□□ -0.69
COL8A1-206ENST00000474648 ANK1P16157 1881 aa10.74□□□□□ -0.69
COL8A1-206ENST00000474648 LINC01553A4QN01 128 aa10.74□□□□□ -0.69
COL8A1-206ENST00000474648 I3L4J1 428 aa10.74□□□□□ -0.69
COL8A1-206ENST00000474648 UCHL3P15374 230 aa10.74□□□□□ -0.69
COL8A1-206ENST00000474648 ACO1P21399 889 aaKnown RBP10.74□□□□□ -0.69
COL8A1-206ENST00000474648 PAX3P23760 479 aa10.74□□□□□ -0.69
COL8A1-206ENST00000474648 CDC25BP30305 580 aa10.74□□□□□ -0.69
COL8A1-206ENST00000474648 PBX2P40425 430 aa10.74□□□□□ -0.69
COL8A1-206ENST00000474648 ASPAP45381 313 aa10.74□□□□□ -0.69
COL8A1-206ENST00000474648 BRCC3P46736 316 aa10.74□□□□□ -0.69
COL8A1-206ENST00000474648 NOP14P78316 857 aaKnown RBP10.74□□□□□ -0.69
COL8A1-206ENST00000474648 SOWAHAQ2M3V2 549 aa10.74□□□□□ -0.69
COL8A1-206ENST00000474648 FIGNQ5HY92 759 aa10.74□□□□□ -0.69
COL8A1-206ENST00000474648 ZNF667Q5HYK9 610 aa10.74□□□□□ -0.69
COL8A1-206ENST00000474648 SPECC1LQ69YQ0 1117 aa10.74□□□□□ -0.69
COL8A1-206ENST00000474648 TAS1R1Q7RTX1 841 aa10.74□□□□□ -0.69
COL8A1-206ENST00000474648 TDHQ8IZJ6 230 aa10.74□□□□□ -0.69
COL8A1-206ENST00000474648 SLC39A11Q8N1S5 342 aa10.74□□□□□ -0.69
COL8A1-206ENST00000474648 UBR7Q8N806 425 aa10.74□□□□□ -0.69
COL8A1-206ENST00000474648 COLGALT1Q8NBJ5 622 aa10.74□□□□□ -0.69
COL8A1-206ENST00000474648 IGSF21Q96ID5 467 aa10.74□□□□□ -0.69
COL8A1-206ENST00000474648 SUSD3Q96L08 255 aa10.74□□□□□ -0.69
COL8A1-206ENST00000474648 SENP8Q96LD8 212 aa10.74□□□□□ -0.69
COL8A1-206ENST00000474648 PCMTD1Q96MG8 357 aaPredicted RBP10.74□□□□□ -0.69
COL8A1-206ENST00000474648 VN1R3Q9BXE9 311 aa10.74□□□□□ -0.69
COL8A1-206ENST00000474648 BCO2Q9BYV7 579 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms