RNA–Protein interactions for RNA: ENST00000473348.5

TRAPPC12-217, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-217ENST00000473348 GANQ9H2C0 597 aa13.48□□□□□ -0.25
TRAPPC12-217ENST00000473348 VRTNQ9H8Y1 702 aa13.48□□□□□ -0.25
TRAPPC12-217ENST00000473348 PLCB1Q9NQ66 1216 aa13.48□□□□□ -0.25
TRAPPC12-217ENST00000473348 MARCH5Q9NX47 278 aa13.48□□□□□ -0.25
TRAPPC12-217ENST00000473348 NXF1Q9UBU9 619 aaKnown RBP13.48□□□□□ -0.25
TRAPPC12-217ENST00000473348 APEX2Q9UBZ4 518 aa13.48□□□□□ -0.25
TRAPPC12-217ENST00000473348 FAN1Q9Y2M0 1017 aa13.48□□□□□ -0.25
TRAPPC12-217ENST00000473348 NUB1Q9Y5A7 615 aa13.48□□□□□ -0.25
TRAPPC12-217ENST00000473348 KPNA7A9QM74 516 aa13.47□□□□□ -0.25
TRAPPC12-217ENST00000473348 EPHB6O15197 1021 aa13.47□□□□□ -0.25
TRAPPC12-217ENST00000473348 SPTLC1O15269 473 aa13.47□□□□□ -0.25
TRAPPC12-217ENST00000473348 ALDH2P05091 517 aa13.47□□□□□ -0.25
TRAPPC12-217ENST00000473348 ITGB1P05556 798 aa13.47□□□□□ -0.25
TRAPPC12-217ENST00000473348 IGFBP6P24592 240 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC12-217ENST00000473348 CDC25BP30305 580 aa13.47□□□□□ -0.25
TRAPPC12-217ENST00000473348 LILRA4P59901 499 aa13.47□□□□□ -0.25
TRAPPC12-217ENST00000473348 WDR72Q3MJ13 1102 aa13.47□□□□□ -0.25
TRAPPC12-217ENST00000473348 KLHDC7AQ5VTJ3 777 aa13.47□□□□□ -0.25
TRAPPC12-217ENST00000473348 SPECC1LQ69YQ0 1117 aa13.47□□□□□ -0.25
TRAPPC12-217ENST00000473348 PHLDB3Q6NSJ2 640 aa13.47□□□□□ -0.25
TRAPPC12-217ENST00000473348 GJB7Q6PEY0 223 aa13.47□□□□□ -0.25
TRAPPC12-217ENST00000473348 DCLRE1AQ6PJP8 1040 aa13.47□□□□□ -0.25
TRAPPC12-217ENST00000473348 KCNT2Q6UVM3 1135 aa13.47□□□□□ -0.25
TRAPPC12-217ENST00000473348 CHRDL2Q6WN34 429 aa13.47□□□□□ -0.25
TRAPPC12-217ENST00000473348 TMC6Q7Z403 805 aa13.47□□□□□ -0.25
TRAPPC12-217ENST00000473348 TDHQ8IZJ6 230 aa13.47□□□□□ -0.25
TRAPPC12-217ENST00000473348 PPM1KQ8N3J5 372 aa13.47□□□□□ -0.25
TRAPPC12-217ENST00000473348 COLGALT1Q8NBJ5 622 aa13.47□□□□□ -0.25
TRAPPC12-217ENST00000473348 ZNF558Q96NG5 402 aa13.47□□□□□ -0.25
TRAPPC12-217ENST00000473348 COLEC11Q9BWP8 271 aa13.47□□□□□ -0.25
TRAPPC12-217ENST00000473348 AJAP1Q9UKB5 411 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC12-217ENST00000473348 ADAM28Q9UKQ2 775 aa13.47□□□□□ -0.25
TRAPPC12-217ENST00000473348 POLIQ9UNA4 740 aa13.47□□□□□ -0.25
TRAPPC12-217ENST00000473348 SNX9Q9Y5X1 595 aa13.47□□□□□ -0.25
TRAPPC12-217ENST00000473348 FHOD1Q9Y613 1164 aa13.47□□□□□ -0.25
TRAPPC12-217ENST00000473348 NT5C1B-RDH14C9J2C7 533 aa13.46□□□□□ -0.25
TRAPPC12-217ENST00000473348 NOL4O94818 638 aa13.46□□□□□ -0.25
TRAPPC12-217ENST00000473348 P4HA1P13674 534 aa13.46□□□□□ -0.25
TRAPPC12-217ENST00000473348 MYOGP15173 224 aa13.46□□□□□ -0.25
TRAPPC12-217ENST00000473348 TRIM21P19474 475 aaKnown RBP13.46□□□□□ -0.25
TRAPPC12-217ENST00000473348 RFX1P22670 979 aa13.46□□□□□ -0.25
TRAPPC12-217ENST00000473348 BRCC3P46736 316 aa13.46□□□□□ -0.25
TRAPPC12-217ENST00000473348 ALDH7A1P49419 539 aaKnown RBP13.46□□□□□ -0.25
TRAPPC12-217ENST00000473348 AARSP49588 968 aaKnown RBP eCLIP13.46□□□□□ -0.25
TRAPPC12-217ENST00000473348 POLR2FP61218 127 aaKnown RBP13.46□□□□□ -0.25
TRAPPC12-217ENST00000473348 CUL2Q13617 745 aa13.46□□□□□ -0.25
TRAPPC12-217ENST00000473348 IQCEQ6IPM2 695 aa13.46□□□□□ -0.25
TRAPPC12-217ENST00000473348 CD300LGQ6UXG3 332 aa13.46□□□□□ -0.25
TRAPPC12-217ENST00000473348 DSTYKQ6XUX3 929 aa13.46□□□□□ -0.25
TRAPPC12-217ENST00000473348 RRAGAQ7L523 313 aa13.46□□□□□ -0.25
TRAPPC12-217ENST00000473348 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC12-217ENST00000473348 TMEM173Q86WV6 379 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC12-217ENST00000473348 ARID3AQ99856 593 aa13.46□□□□□ -0.25
TRAPPC12-217ENST00000473348 SMYD3Q9H7B4 428 aa13.46□□□□□ -0.25
TRAPPC12-217ENST00000473348 AAASQ9NRG9 546 aa13.46□□□□□ -0.25
TRAPPC12-217ENST00000473348 GDAP2Q9NXN4 497 aa13.46□□□□□ -0.25
TRAPPC12-217ENST00000473348 PCDHA11Q9Y5I1 949 aa13.46□□□□□ -0.25
TRAPPC12-217ENST00000473348 PLXNA3P51805 1871 aa13.45□□□□□ -0.26
TRAPPC12-217ENST00000473348 LINC01553A4QN01 128 aa13.45□□□□□ -0.26
TRAPPC12-217ENST00000473348 CARNS1A5YM72 827 aa13.45□□□□□ -0.26
TRAPPC12-217ENST00000473348 I3L4J1 428 aa13.45□□□□□ -0.26
TRAPPC12-217ENST00000473348 TADA2AO75478 443 aa13.45□□□□□ -0.26
TRAPPC12-217ENST00000473348 LINC00271P0C7V0 271 aa13.45□□□□□ -0.26
TRAPPC12-217ENST00000473348 ODC1P11926 461 aa13.45□□□□□ -0.26
TRAPPC12-217ENST00000473348 UCHL3P15374 230 aa13.45□□□□□ -0.26
TRAPPC12-217ENST00000473348 PAX3P23760 479 aa13.45□□□□□ -0.26
TRAPPC12-217ENST00000473348 TBXAS1P24557 533 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC12-217ENST00000473348 ASPAP45381 313 aa13.45□□□□□ -0.26
TRAPPC12-217ENST00000473348 RAP1GAPP47736 663 aa13.45□□□□□ -0.26
TRAPPC12-217ENST00000473348 GCNT1Q02742 428 aa13.45□□□□□ -0.26
TRAPPC12-217ENST00000473348 TIGD5Q53EQ6 642 aa13.45□□□□□ -0.26
TRAPPC12-217ENST00000473348 FIGNQ5HY92 759 aa13.45□□□□□ -0.26
TRAPPC12-217ENST00000473348 DRC7Q8IY82 874 aa13.45□□□□□ -0.26
TRAPPC12-217ENST00000473348 SLC39A11Q8N1S5 342 aa13.45□□□□□ -0.26
TRAPPC12-217ENST00000473348 BCL7CQ8WUZ0 217 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC12-217ENST00000473348 ANP32BQ92688 251 aaKnown RBP13.45□□□□□ -0.26
TRAPPC12-217ENST00000473348 CLP1Q92989 425 aaKnown RBP13.45□□□□□ -0.26
TRAPPC12-217ENST00000473348 KAT5Q92993 513 aa13.45□□□□□ -0.26
TRAPPC12-217ENST00000473348 IGSF21Q96ID5 467 aa13.45□□□□□ -0.26
TRAPPC12-217ENST00000473348 SENP8Q96LD8 212 aa13.45□□□□□ -0.26
TRAPPC12-217ENST00000473348 FAM81BQ96LP2 452 aa13.45□□□□□ -0.26
TRAPPC12-217ENST00000473348 KREMEN1Q96MU8 473 aa13.45□□□□□ -0.26
TRAPPC12-217ENST00000473348 MMS19Q96T76 1030 aa13.45□□□□□ -0.26
TRAPPC12-217ENST00000473348 NUP58Q9BVL2 599 aa13.45□□□□□ -0.26
TRAPPC12-217ENST00000473348 TTYH3Q9C0H2 523 aa13.45□□□□□ -0.26
TRAPPC12-217ENST00000473348 PRO3102Q9H379 93 aa13.45□□□□□ -0.26
TRAPPC12-217ENST00000473348 UBE2TQ9NPD8 197 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC12-217ENST00000473348 NLRC4Q9NPP4 1024 aa13.45□□□□□ -0.26
TRAPPC12-217ENST00000473348 CEP72Q9P209 647 aa13.45□□□□□ -0.26
TRAPPC12-217ENST00000473348 FBXL5Q9UKA1 691 aa13.45□□□□□ -0.26
TRAPPC12-217ENST00000473348 DNAJC12Q9UKB3 198 aa13.45□□□□□ -0.26
TRAPPC12-217ENST00000473348 DAAM1Q9Y4D1 1078 aa13.45□□□□□ -0.26
TRAPPC12-217ENST00000473348 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.45□□□□□ -0.263e-6■□□□□ 10.3
TRAPPC12-217ENST00000473348 SF3B1O75533 1304 aaKnown RBP eCLIP13.44□□□□□ -0.264e-8■■■■■ 68.9
TRAPPC12-217ENST00000473348 MYO9BQ13459 2157 aa13.44□□□□□ -0.26
TRAPPC12-217ENST00000473348 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC12-217ENST00000473348 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC12-217ENST00000473348 CYB561D2O14569 222 aa13.44□□□□□ -0.26
TRAPPC12-217ENST00000473348 TRAPPC3O43617 180 aa13.44□□□□□ -0.26
TRAPPC12-217ENST00000473348 GYPCP04921 128 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms