RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 SLC8B1Q6J4K2 584 aa7.58□□□□□ -1.2
CKS1B-205ENST00000473344 PRR23BQ6ZRT6 265 aa7.58□□□□□ -1.2
CKS1B-205ENST00000473344 CELF5Q8N6W0 485 aaKnown RBP7.58□□□□□ -1.2
CKS1B-205ENST00000473344 NECAB1Q8N987 351 aa7.58□□□□□ -1.2
CKS1B-205ENST00000473344 FAM3CQ92520 227 aa7.58□□□□□ -1.2
CKS1B-205ENST00000473344 KIFAP3Q92845 792 aa7.58□□□□□ -1.2
CKS1B-205ENST00000473344 TNFRSF25Q93038 417 aa7.58□□□□□ -1.2
CKS1B-205ENST00000473344 ZNF512Q96ME7 567 aaPredicted RBP7.58□□□□□ -1.2
CKS1B-205ENST00000473344 PPP1R10Q96QC0 940 aaKnown RBP7.58□□□□□ -1.2
CKS1B-205ENST00000473344 TCHPQ9BT92 498 aa7.58□□□□□ -1.2
CKS1B-205ENST00000473344 IER2Q9BTL4 223 aa7.58□□□□□ -1.2
CKS1B-205ENST00000473344 POLR3CQ9BUI4 534 aaPredicted RBP7.58□□□□□ -1.2
CKS1B-205ENST00000473344 KIFC3Q9BVG8 833 aa7.58□□□□□ -1.2
CKS1B-205ENST00000473344 PLA2G2FQ9BZM2 168 aa7.58□□□□□ -1.2
CKS1B-205ENST00000473344 CCDC113Q9H0I3 377 aa7.58□□□□□ -1.2
CKS1B-205ENST00000473344 SLITRK6Q9H5Y7 841 aa7.58□□□□□ -1.2
CKS1B-205ENST00000473344 LMAN1LQ9HAT1 526 aa7.58□□□□□ -1.2
CKS1B-205ENST00000473344 AVENQ9NQS1 362 aaPredicted RBP7.58□□□□□ -1.2
CKS1B-205ENST00000473344 PRMT8Q9NR22 394 aaPredicted RBP7.58□□□□□ -1.2
CKS1B-205ENST00000473344 PIAS3Q9Y6X2 628 aa7.58□□□□□ -1.2
CKS1B-205ENST00000473344 COL4A3Q01955 1670 aa7.57□□□□□ -1.2
CKS1B-205ENST00000473344 WDR27A2RRH5 827 aa7.57□□□□□ -1.2
CKS1B-205ENST00000473344 DCDC2BA2VCK2 349 aa7.57□□□□□ -1.2
CKS1B-205ENST00000473344 CCDC169A6NNP5 214 aa7.57□□□□□ -1.2
CKS1B-205ENST00000473344 PODXLO00592 558 aa7.57□□□□□ -1.2
CKS1B-205ENST00000473344 SYN3O14994 580 aa7.57□□□□□ -1.2
CKS1B-205ENST00000473344 MICAL2O94851 1124 aa7.57□□□□□ -1.2
CKS1B-205ENST00000473344 ABLIM3O94929 683 aa7.57□□□□□ -1.2
CKS1B-205ENST00000473344 KIF20AO95235 890 aa7.57□□□□□ -1.2
CKS1B-205ENST00000473344 FDPSP14324 419 aaKnown RBP7.57□□□□□ -1.2
CKS1B-205ENST00000473344 CPB1P15086 417 aa7.57□□□□□ -1.2
CKS1B-205ENST00000473344 GRM5P41594 1212 aa7.57□□□□□ -1.2
CKS1B-205ENST00000473344 GNL2Q13823 731 aaKnown RBP7.57□□□□□ -1.2
CKS1B-205ENST00000473344 ZNF568Q3ZCX4 644 aa7.57□□□□□ -1.2
CKS1B-205ENST00000473344 CTXN3Q4LDR2 81 aa7.57□□□□□ -1.2
CKS1B-205ENST00000473344 FAM78AQ5JUQ0 283 aa7.57□□□□□ -1.2
CKS1B-205ENST00000473344 TPGS2Q68CL5 300 aa7.57□□□□□ -1.2
CKS1B-205ENST00000473344 LAIR1Q6GTX8 287 aa7.57□□□□□ -1.2
CKS1B-205ENST00000473344 C1orf228Q6PIY5 440 aa7.57□□□□□ -1.2
CKS1B-205ENST00000473344 YAF2Q8IY57 180 aa7.57□□□□□ -1.2
CKS1B-205ENST00000473344 TCEAL8Q8IYN2 117 aa7.57□□□□□ -1.2
CKS1B-205ENST00000473344 LEMD2Q8NC56 503 aa7.57□□□□□ -1.2
CKS1B-205ENST00000473344 C3orf58Q8NDZ4 430 aa7.57□□□□□ -1.2
CKS1B-205ENST00000473344 CSGALNACT1Q8TDX6 532 aa7.57□□□□□ -1.2
CKS1B-205ENST00000473344 DEPDC1BQ8WUY9 529 aa7.57□□□□□ -1.2
CKS1B-205ENST00000473344 BSNDQ8WZ55 320 aa7.57□□□□□ -1.2
CKS1B-205ENST00000473344 NELL1Q92832 810 aa7.57□□□□□ -1.2
CKS1B-205ENST00000473344 SMARCD2Q92925 531 aa7.57□□□□□ -1.2
CKS1B-205ENST00000473344 GTF3C6Q969F1 213 aa7.57□□□□□ -1.2
CKS1B-205ENST00000473344 CHAMP1Q96JM3 812 aa7.57□□□□□ -1.2
CKS1B-205ENST00000473344 ASB16Q96NS5 453 aa7.57□□□□□ -1.2
CKS1B-205ENST00000473344 TMEM60Q9H2L4 133 aa7.57□□□□□ -1.2
CKS1B-205ENST00000473344 CHRDQ9H2X0 955 aa7.57□□□□□ -1.2
CKS1B-205ENST00000473344 ZNF334Q9HCZ1 680 aaPredicted RBP7.57□□□□□ -1.2
CKS1B-205ENST00000473344 ASAH2Q9NR71 780 aa7.57□□□□□ -1.2
CKS1B-205ENST00000473344 TNFSF13BQ9Y275 285 aa7.57□□□□□ -1.2
CKS1B-205ENST00000473344 INSL5Q9Y5Q6 135 aa7.57□□□□□ -1.2
CKS1B-205ENST00000473344 PHLPP2Q6ZVD8 1323 aa7.56□□□□□ -1.2
CKS1B-205ENST00000473344 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.56□□□□□ -1.2
CKS1B-205ENST00000473344 WNT7AO00755 349 aa7.56□□□□□ -1.2
CKS1B-205ENST00000473344 DYNC1I1O14576 645 aa7.56□□□□□ -1.2
CKS1B-205ENST00000473344 FOXD2O60548 495 aaPredicted RBP7.56□□□□□ -1.2
CKS1B-205ENST00000473344 KRT37O76014 449 aa7.56□□□□□ -1.2
CKS1B-205ENST00000473344 ADH1BP00325 375 aa7.56□□□□□ -1.2
CKS1B-205ENST00000473344 EDN1P05305 212 aa7.56□□□□□ -1.2
CKS1B-205ENST00000473344 RETP07949 1114 aa7.56□□□□□ -1.2
CKS1B-205ENST00000473344 OR52Z1P0C646 297 aa7.56□□□□□ -1.2
CKS1B-205ENST00000473344 MYL4P12829 197 aa7.56□□□□□ -1.2
CKS1B-205ENST00000473344 MUTP22033 750 aa7.56□□□□□ -1.2
CKS1B-205ENST00000473344 FCARP24071 287 aa7.56□□□□□ -1.2
CKS1B-205ENST00000473344 IGFBP6P24592 240 aaPredicted RBP7.56□□□□□ -1.2
CKS1B-205ENST00000473344 CCNE1P24864 410 aa7.56□□□□□ -1.2
CKS1B-205ENST00000473344 MARCKSP29966 332 aaPredicted RBP7.56□□□□□ -1.2
CKS1B-205ENST00000473344 RPL9P32969 192 aaKnown RBP7.56□□□□□ -1.2
CKS1B-205ENST00000473344 MCM4P33991 863 aa7.56□□□□□ -1.2
CKS1B-205ENST00000473344 CCT6AP40227 531 aaKnown RBP7.56□□□□□ -1.2
CKS1B-205ENST00000473344 CXCL12P48061 93 aa7.56□□□□□ -1.2
CKS1B-205ENST00000473344 KPNA1P52294 538 aaPredicted RBP7.56□□□□□ -1.2
CKS1B-205ENST00000473344 PEX3P56589 373 aa7.56□□□□□ -1.2
CKS1B-205ENST00000473344 ANAPC15P60006 121 aa7.56□□□□□ -1.2
CKS1B-205ENST00000473344 TWF1Q12792 350 aa7.56□□□□□ -1.2
CKS1B-205ENST00000473344 DMP1Q13316 513 aaPredicted RBP7.56□□□□□ -1.2
CKS1B-205ENST00000473344 ORC2Q13416 577 aaPredicted RBP7.56□□□□□ -1.2
CKS1B-205ENST00000473344 FZD5Q13467 585 aa7.56□□□□□ -1.2
CKS1B-205ENST00000473344 SIM2Q14190 667 aaPredicted RBP7.56□□□□□ -1.2
CKS1B-205ENST00000473344 LRRC32Q14392 662 aa7.56□□□□□ -1.2
CKS1B-205ENST00000473344 PRSS36Q5K4E3 855 aa7.56□□□□□ -1.2
CKS1B-205ENST00000473344 NT5DC1Q5TFE4 455 aa7.56□□□□□ -1.2
CKS1B-205ENST00000473344 ZNF280DQ6N043 979 aa7.56□□□□□ -1.2
CKS1B-205ENST00000473344 VITQ6UXI7 678 aa7.56□□□□□ -1.2
CKS1B-205ENST00000473344 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.56□□□□□ -1.2
CKS1B-205ENST00000473344 MAP4K3Q8IVH8 894 aa7.56□□□□□ -1.2
CKS1B-205ENST00000473344 CEP120Q8N960 986 aa7.56□□□□□ -1.2
CKS1B-205ENST00000473344 APPL2Q8NEU8 664 aa7.56□□□□□ -1.2
CKS1B-205ENST00000473344 ZSCAN18Q8TBC5 510 aaPredicted RBP7.56□□□□□ -1.2
CKS1B-205ENST00000473344 FAM200AQ8TCP9 573 aa7.56□□□□□ -1.2
CKS1B-205ENST00000473344 NETO1Q8TDF5 533 aa7.56□□□□□ -1.2
CKS1B-205ENST00000473344 E2F7Q96AV8 911 aa7.56□□□□□ -1.2
CKS1B-205ENST00000473344 TCEAL4Q96EI5 215 aa7.56□□□□□ -1.2
CKS1B-205ENST00000473344 MSANTD3Q96H12 275 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms