RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 TNNI1P19237 187 aa22.39■■□□□ 1.17
COL18A1-207ENST00000473212 JAK3P52333 1124 aa22.39■■□□□ 1.17
COL18A1-207ENST00000473212 ACSF2Q96CM8 615 aaPredicted RBP22.39■■□□□ 1.17
COL18A1-207ENST00000473212 FAM81BQ96LP2 452 aa22.39■■□□□ 1.17
COL18A1-207ENST00000473212 TIPINQ9BVW5 301 aa22.39■■□□□ 1.17
COL18A1-207ENST00000473212 PITPNM3Q9BZ71 974 aa22.39■■□□□ 1.17
COL18A1-207ENST00000473212 NOP53Q9NZM5 478 aaKnown RBP22.39■■□□□ 1.17
COL18A1-207ENST00000473212 PCDHA10Q9Y5I2 948 aa22.39■■□□□ 1.17
COL18A1-207ENST00000473212 FER1L6Q2WGJ9 1857 aa22.39■■□□□ 1.17
COL18A1-207ENST00000473212 ZNF541Q9H0D2 1346 aa22.39■■□□□ 1.17
COL18A1-207ENST00000473212 ZSCAN5DPP0CG00 497 aa22.38■■□□□ 1.17
COL18A1-207ENST00000473212 NSFP46459 744 aaKnown RBP22.38■■□□□ 1.17
COL18A1-207ENST00000473212 STAT4Q14765 748 aa22.38■■□□□ 1.17
COL18A1-207ENST00000473212 CCDC89Q8N998 374 aa22.38■■□□□ 1.17
COL18A1-207ENST00000473212 FLAD1Q8NFF5 587 aa22.38■■□□□ 1.17
COL18A1-207ENST00000473212 ZNF526Q8TF50 670 aaPredicted RBP22.38■■□□□ 1.17
COL18A1-207ENST00000473212 PROSCO94903 275 aa22.38■■□□□ 1.17
COL18A1-207ENST00000473212 VNN1O95497 513 aa22.38■■□□□ 1.17
COL18A1-207ENST00000473212 ETS1P14921 441 aa22.38■■□□□ 1.17
COL18A1-207ENST00000473212 KRT76Q01546 638 aa22.38■■□□□ 1.17
COL18A1-207ENST00000473212 GCNT1Q02742 428 aa22.38■■□□□ 1.17
COL18A1-207ENST00000473212 CCNG2Q16589 344 aa22.38■■□□□ 1.17
COL18A1-207ENST00000473212 RNF43Q68DV7 783 aa22.38■■□□□ 1.17
COL18A1-207ENST00000473212 PPP1R21Q6ZMI0 780 aa22.38■■□□□ 1.17
COL18A1-207ENST00000473212 MON1BQ7L1V2 547 aa22.38■■□□□ 1.17
COL18A1-207ENST00000473212 GSTA5Q7RTV2 222 aa22.38■■□□□ 1.17
COL18A1-207ENST00000473212 SUPT20HQ8NEM7 779 aa22.38■■□□□ 1.17
COL18A1-207ENST00000473212 RBM15Q96T37 977 aaKnown RBP eCLIP22.38■■□□□ 1.17
COL18A1-207ENST00000473212 RPAP3Q9H6T3 665 aaPredicted RBP22.38■■□□□ 1.17
COL18A1-207ENST00000473212 KIF1CO43896 1103 aaKnown RBP22.37■■□□□ 1.17
COL18A1-207ENST00000473212 DIAPH2O60879 1101 aa22.37■■□□□ 1.17
COL18A1-207ENST00000473212 SPAG7O75391 227 aa22.37■■□□□ 1.17
COL18A1-207ENST00000473212 CCND1P24385 295 aa22.37■■□□□ 1.17
COL18A1-207ENST00000473212 PSMC4P43686 418 aa22.37■■□□□ 1.17
COL18A1-207ENST00000473212 WDR4P57081 412 aaKnown RBP22.37■■□□□ 1.17
COL18A1-207ENST00000473212 CRYMQ14894 314 aa22.37■■□□□ 1.17
COL18A1-207ENST00000473212 KAZNQ674X7 775 aa22.37■■□□□ 1.17
COL18A1-207ENST00000473212 TMEM270Q6UE05 265 aa22.37■■□□□ 1.17
COL18A1-207ENST00000473212 C15orf39Q6ZRI6 1047 aa22.37■■□□□ 1.17
COL18A1-207ENST00000473212 CAPN12Q6ZSI9 719 aa22.37■■□□□ 1.17
COL18A1-207ENST00000473212 SLC17A8Q8NDX2 589 aa22.37■■□□□ 1.17
COL18A1-207ENST00000473212 TMEM143Q96AN5 459 aa22.37■■□□□ 1.17
COL18A1-207ENST00000473212 NTPCRQ9BSD7 190 aaKnown RBP22.37■■□□□ 1.17
COL18A1-207ENST00000473212 OSBPL8Q9BZF1 889 aa22.37■■□□□ 1.17
COL18A1-207ENST00000473212 FHDC1Q9C0D6 1143 aaPredicted RBP22.37■■□□□ 1.17
COL18A1-207ENST00000473212 EURLQ9NYK6 297 aa22.37■■□□□ 1.17
COL18A1-207ENST00000473212 EDN1P05305 212 aa22.37■■□□□ 1.17
COL18A1-207ENST00000473212 GTF2H1P32780 548 aa22.37■■□□□ 1.17
COL18A1-207ENST00000473212 MAGEA4P43358 317 aa22.37■■□□□ 1.17
COL18A1-207ENST00000473212 IL9RQ01113 521 aa22.37■■□□□ 1.17
COL18A1-207ENST00000473212 P3H1Q32P28 736 aa22.37■■□□□ 1.17
COL18A1-207ENST00000473212 MTERF2Q49AM1 385 aa22.37■■□□□ 1.17
COL18A1-207ENST00000473212 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.37■■□□□ 1.172e-6■■■■□ 19.5
COL18A1-207ENST00000473212 NLRX1Q86UT6 975 aa22.37■■□□□ 1.17
COL18A1-207ENST00000473212 ERICH1Q86X53 443 aa22.37■■□□□ 1.17
COL18A1-207ENST00000473212 ANKRD35Q8N283 1001 aa22.37■■□□□ 1.17
COL18A1-207ENST00000473212 POLR3FQ9H1D9 316 aaPredicted RBP22.37■■□□□ 1.17
COL18A1-207ENST00000473212 FAM47DPA6NHR8 397 aa22.36■■□□□ 1.17
COL18A1-207ENST00000473212 NR3C2P08235 984 aa22.36■■□□□ 1.17
COL18A1-207ENST00000473212 MYBL1P10243 752 aa22.36■■□□□ 1.17
COL18A1-207ENST00000473212 RPL7AP62424 266 aaKnown RBP22.36■■□□□ 1.17
COL18A1-207ENST00000473212 GHRHRQ02643 423 aa22.36■■□□□ 1.17
COL18A1-207ENST00000473212 BBOF1Q8ND07 529 aa22.36■■□□□ 1.17
COL18A1-207ENST00000473212 MAML1Q92585 1016 aa22.36■■□□□ 1.17
COL18A1-207ENST00000473212 RNF146Q9NTX7 359 aa22.36■■□□□ 1.17
COL18A1-207ENST00000473212 PCDHB2Q9Y5E7 798 aa22.36■■□□□ 1.17
COL18A1-207ENST00000473212 ACTL7BQ9Y614 415 aa22.36■■□□□ 1.17
COL18A1-207ENST00000473212 PSME4Q14997 1843 aa22.36■■□□□ 1.17
COL18A1-207ENST00000473212 CCNB1P14635 433 aa22.36■■□□□ 1.17
COL18A1-207ENST00000473212 ACO1P21399 889 aaKnown RBP22.36■■□□□ 1.17
COL18A1-207ENST00000473212 PIK3CAP42336 1068 aa22.36■■□□□ 1.17
COL18A1-207ENST00000473212 ENOSF1Q7L5Y1 443 aa22.36■■□□□ 1.17
COL18A1-207ENST00000473212 USP37Q86T82 979 aa22.36■■□□□ 1.17
COL18A1-207ENST00000473212 RHOT1Q8IXI2 618 aa22.36■■□□□ 1.17
COL18A1-207ENST00000473212 SAMD3Q8N6K7 520 aa22.36■■□□□ 1.17
COL18A1-207ENST00000473212 TRIM11Q96F44 468 aa22.36■■□□□ 1.17
COL18A1-207ENST00000473212 CEP83Q9Y592 693 aa22.36■■□□□ 1.17
COL18A1-207ENST00000473212 CYP1A1P04798 512 aaPredicted RBP22.35■■□□□ 1.17
COL18A1-207ENST00000473212 KLRC2P26717 231 aa22.35■■□□□ 1.17
COL18A1-207ENST00000473212 SFNP31947 248 aa22.35■■□□□ 1.17
COL18A1-207ENST00000473212 PRKCEQ02156 737 aa22.35■■□□□ 1.17
COL18A1-207ENST00000473212 MAMLD1Q13495 774 aa22.35■■□□□ 1.17
COL18A1-207ENST00000473212 FASTKD3Q14CZ7 662 aaKnown RBP22.35■■□□□ 1.17
COL18A1-207ENST00000473212 FAM182AQ5T1J6 154 aa22.35■■□□□ 1.17
COL18A1-207ENST00000473212 FAM83AQ86UY5 434 aa22.35■■□□□ 1.17
COL18A1-207ENST00000473212 SPIRE2Q8WWL2 714 aa22.35■■□□□ 1.17
COL18A1-207ENST00000473212 HAUS1Q96CS2 278 aa22.35■■□□□ 1.17
COL18A1-207ENST00000473212 ETNK1Q9HBU6 452 aa22.35■■□□□ 1.17
COL18A1-207ENST00000473212 SAYSD1Q9NPB0 183 aa22.35■■□□□ 1.17
COL18A1-207ENST00000473212 ADAM22Q9P0K1 906 aa22.35■■□□□ 1.17
COL18A1-207ENST00000473212 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.35■■□□□ 1.17
COL18A1-207ENST00000473212 EXOC1LA0A1B0GW35 172 aa22.35■■□□□ 1.17
COL18A1-207ENST00000473212 KCNA2P16389 499 aa22.35■■□□□ 1.17
COL18A1-207ENST00000473212 LACTBP83111 547 aaPredicted RBP22.35■■□□□ 1.17
COL18A1-207ENST00000473212 PTP4A2Q12974 167 aa22.35■■□□□ 1.17
COL18A1-207ENST00000473212 ACVR2BQ13705 512 aa22.35■■□□□ 1.17
COL18A1-207ENST00000473212 TXNRD3NBQ6F5E7 133 aa22.35■■□□□ 1.17
COL18A1-207ENST00000473212 MIS18BP1Q6P0N0 1132 aa22.35■■□□□ 1.17
COL18A1-207ENST00000473212 VSIG10LQ86VR7 867 aa22.35■■□□□ 1.17
COL18A1-207ENST00000473212 RELL1Q8IUW5 271 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms