RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 TMEM189-UBE2V1I3L0A0 370 aa11.31□□□□□ -0.6
CDHR3-209ENST00000472116 MOSPD3O75425 235 aa11.31□□□□□ -0.6
CDHR3-209ENST00000472116 STBD1O95210 358 aa11.31□□□□□ -0.6
CDHR3-209ENST00000472116 GNA11P29992 359 aa11.31□□□□□ -0.6
CDHR3-209ENST00000472116 EPHA5P54756 1037 aa11.31□□□□□ -0.6
CDHR3-209ENST00000472116 NPEPPSP55786 919 aa11.31□□□□□ -0.6
CDHR3-209ENST00000472116 GFPT1Q06210 699 aaPredicted RBP11.31□□□□□ -0.6
CDHR3-209ENST00000472116 TNK2Q07912 1038 aa11.31□□□□□ -0.6
CDHR3-209ENST00000472116 PLD1Q13393 1074 aa11.31□□□□□ -0.6
CDHR3-209ENST00000472116 TRIP6Q15654 476 aaKnown RBP11.31□□□□□ -0.6
CDHR3-209ENST00000472116 LPCAT2Q7L5N7 544 aa11.31□□□□□ -0.6
CDHR3-209ENST00000472116 OTUD6AQ7L8S5 288 aa11.31□□□□□ -0.6
CDHR3-209ENST00000472116 SYT12Q8IV01 421 aa11.31□□□□□ -0.6
CDHR3-209ENST00000472116 GPIHBP1Q8IV16 184 aa11.31□□□□□ -0.6
CDHR3-209ENST00000472116 RPLP0P6Q8NHW5 317 aa11.31□□□□□ -0.6
CDHR3-209ENST00000472116 CCDC26Q8TAB7 109 aa11.31□□□□□ -0.6
CDHR3-209ENST00000472116 SHKBP1Q8TBC3 707 aa11.31□□□□□ -0.6
CDHR3-209ENST00000472116 LENG9Q96B70 501 aa11.31□□□□□ -0.6
CDHR3-209ENST00000472116 UROC1Q96N76 676 aa11.31□□□□□ -0.6
CDHR3-209ENST00000472116 MTRQ99707 1265 aa11.31□□□□□ -0.6
CDHR3-209ENST00000472116 HNRNPABQ99729 332 aaKnown RBP11.31□□□□□ -0.6
CDHR3-209ENST00000472116 TPSD1Q9BZJ3 242 aa11.31□□□□□ -0.6
CDHR3-209ENST00000472116 DHX33Q9H6R0 707 aaKnown RBP11.31□□□□□ -0.6
CDHR3-209ENST00000472116 DKK4Q9UBT3 224 aa11.31□□□□□ -0.6
CDHR3-209ENST00000472116 CELSR3Q9NYQ7 3312 aa11.31□□□□□ -0.6
CDHR3-209ENST00000472116 TRDMT1O14717 391 aaKnown RBP11.3□□□□□ -0.6
CDHR3-209ENST00000472116 TNFRSF10BO14763 440 aa11.3□□□□□ -0.6
CDHR3-209ENST00000472116 SEC24AO95486 1093 aa11.3□□□□□ -0.6
CDHR3-209ENST00000472116 EGFP01133 1207 aa11.3□□□□□ -0.6
CDHR3-209ENST00000472116 FTH1P19P0C7X4 201 aa11.3□□□□□ -0.6
CDHR3-209ENST00000472116 QARSP47897 775 aaKnown RBP11.3□□□□□ -0.6
CDHR3-209ENST00000472116 MCM2P49736 904 aa11.3□□□□□ -0.6
CDHR3-209ENST00000472116 FAM193AP78312 1265 aa11.3□□□□□ -0.6
CDHR3-209ENST00000472116 RTN1Q16799 776 aa11.3□□□□□ -0.6
CDHR3-209ENST00000472116 SLC23A3Q6PIS1 610 aa11.3□□□□□ -0.6
CDHR3-209ENST00000472116 CDR2LQ86X02 465 aaPredicted RBP11.3□□□□□ -0.6
CDHR3-209ENST00000472116 PLEKHM2Q8IWE5 1019 aa11.3□□□□□ -0.6
CDHR3-209ENST00000472116 SCUBE3Q8IX30 993 aa11.3□□□□□ -0.6
CDHR3-209ENST00000472116 ZNF843Q8N446 348 aa11.3□□□□□ -0.6
CDHR3-209ENST00000472116 BICD2Q8TD16 824 aa11.3□□□□□ -0.6
CDHR3-209ENST00000472116 CEP72Q9P209 647 aa11.3□□□□□ -0.6
CDHR3-209ENST00000472116 MAFFQ9ULX9 164 aa11.3□□□□□ -0.6
CDHR3-209ENST00000472116 SLC6A14Q9UN76 642 aa11.3□□□□□ -0.6
CDHR3-209ENST00000472116 PLXND1Q9Y4D7 1925 aa11.3□□□□□ -0.6
CDHR3-209ENST00000472116 KALRNO60229 2985 aa11.3□□□□□ -0.6
CDHR3-209ENST00000472116 CITO14578 2027 aa11.3□□□□□ -0.6
CDHR3-209ENST00000472116 DENND4CQ5VZ89 1909 aa11.29□□□□□ -0.6
CDHR3-209ENST00000472116 A0A087WV48 116 aa11.29□□□□□ -0.6
CDHR3-209ENST00000472116 ESYT2A0FGR8 921 aa11.29□□□□□ -0.6
CDHR3-209ENST00000472116 I3L4J1 428 aa11.29□□□□□ -0.6
CDHR3-209ENST00000472116 PSMD10O75832 226 aa11.29□□□□□ -0.6
CDHR3-209ENST00000472116 FGF19O95750 216 aa11.29□□□□□ -0.6
CDHR3-209ENST00000472116 CPB1P15086 417 aa11.29□□□□□ -0.6
CDHR3-209ENST00000472116 EPHB3P54753 998 aa11.29□□□□□ -0.6
CDHR3-209ENST00000472116 MBTD1Q05BQ5 628 aa11.29□□□□□ -0.6
CDHR3-209ENST00000472116 GPR158Q5T848 1215 aa11.29□□□□□ -0.6
CDHR3-209ENST00000472116 PPP4R3AQ6IN85 833 aa11.29□□□□□ -0.6
CDHR3-209ENST00000472116 ANO7Q6IWH7 933 aa11.29□□□□□ -0.6
CDHR3-209ENST00000472116 ARMCX6Q7L4S7 300 aa11.29□□□□□ -0.6
CDHR3-209ENST00000472116 RABEPKQ7Z6M1 372 aa11.29□□□□□ -0.6
CDHR3-209ENST00000472116 TTC30AQ86WT1 665 aa11.29□□□□□ -0.6
CDHR3-209ENST00000472116 PNPLA1Q8N8W4 532 aa11.29□□□□□ -0.6
CDHR3-209ENST00000472116 SPRYD3Q8NCJ5 442 aa11.29□□□□□ -0.6
CDHR3-209ENST00000472116 CEP76Q8TAP6 659 aa11.29□□□□□ -0.6
CDHR3-209ENST00000472116 PIP4K2CQ8TBX8 421 aa11.29□□□□□ -0.6
CDHR3-209ENST00000472116 KIF2CQ99661 725 aa11.29□□□□□ -0.6
CDHR3-209ENST00000472116 ADPGKQ9BRR6 497 aa11.29□□□□□ -0.6
CDHR3-209ENST00000472116 SLKQ9H2G2 1235 aaPredicted RBP11.29□□□□□ -0.6
CDHR3-209ENST00000472116 ATXN3LQ9H3M9 355 aa11.29□□□□□ -0.6
CDHR3-209ENST00000472116 POLR3BQ9NW08 1133 aaPredicted RBP11.29□□□□□ -0.6
CDHR3-209ENST00000472116 AFF4Q9UHB7 1163 aaKnown RBP11.29□□□□□ -0.6
CDHR3-209ENST00000472116 TAF6LQ9Y6J9 622 aa11.29□□□□□ -0.6
CDHR3-209ENST00000472116 TSC2P49815 1807 aa11.28□□□□□ -0.6
CDHR3-209ENST00000472116 A0A1B0GUA9 196 aa11.28□□□□□ -0.6
CDHR3-209ENST00000472116 PTGESO14684 152 aa11.28□□□□□ -0.6
CDHR3-209ENST00000472116 SYN3O14994 580 aa11.28□□□□□ -0.6
CDHR3-209ENST00000472116 B4GALT5O43286 388 aa11.28□□□□□ -0.6
CDHR3-209ENST00000472116 RECQL4O94761 1208 aa11.28□□□□□ -0.6
CDHR3-209ENST00000472116 ALDH1A2O94788 518 aa11.28□□□□□ -0.6
CDHR3-209ENST00000472116 BCKDHBP21953 392 aa11.28□□□□□ -0.6
CDHR3-209ENST00000472116 HOXD12P35452 270 aa11.28□□□□□ -0.6
CDHR3-209ENST00000472116 USP11P51784 963 aa11.28□□□□□ -0.6
CDHR3-209ENST00000472116 CLCNKBP51801 687 aa11.28□□□□□ -0.6
CDHR3-209ENST00000472116 CYP4A11Q02928 519 aa11.28□□□□□ -0.6
CDHR3-209ENST00000472116 POU5F1BQ06416 359 aa11.28□□□□□ -0.6
CDHR3-209ENST00000472116 RUNX3Q13761 415 aa11.28□□□□□ -0.6
CDHR3-209ENST00000472116 DUOXA1Q1HG43 343 aa11.28□□□□□ -0.6
CDHR3-209ENST00000472116 CTXN3Q4LDR2 81 aa11.28□□□□□ -0.6
CDHR3-209ENST00000472116 XKR9Q5GH70 373 aa11.28□□□□□ -0.6
CDHR3-209ENST00000472116 LYSMD4Q5XG99 296 aa11.28□□□□□ -0.6
CDHR3-209ENST00000472116 ZNF280DQ6N043 979 aa11.28□□□□□ -0.6
CDHR3-209ENST00000472116 IFNLR1Q8IU57 520 aaPredicted RBP11.28□□□□□ -0.6
CDHR3-209ENST00000472116 MINDY1Q8N5J2 469 aa11.28□□□□□ -0.6
CDHR3-209ENST00000472116 GJA10Q969M2 543 aa11.28□□□□□ -0.6
CDHR3-209ENST00000472116 CRELD1Q96HD1 420 aa11.28□□□□□ -0.6
CDHR3-209ENST00000472116 CNOT6LQ96LI5 555 aaKnown RBP11.28□□□□□ -0.6
CDHR3-209ENST00000472116 CCDC43Q96MW1 224 aaKnown RBP11.28□□□□□ -0.6
CDHR3-209ENST00000472116 GCNAQ96QF7 691 aa11.28□□□□□ -0.6
CDHR3-209ENST00000472116 P2RY13Q9BPV8 354 aa11.28□□□□□ -0.6
CDHR3-209ENST00000472116 ZMYND12Q9H0C1 365 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms