RNA–Protein interactions for RNA: ENST00000471470.1

CDC45-208, Transcript of cell division cycle 45, human

TSL 5

Gene CDC45, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC45-208	ENST00000471470	PRG3	Q9Y2Y8	225 aa	Predicted RBP	13.62	□□□□□ -0.23
CDC45-208	ENST00000471470	NUB1	Q9Y5A7	615 aa		13.62	□□□□□ -0.23
CDC45-208	ENST00000471470	PCDHB12	Q9Y5F1	795 aa		13.62	□□□□□ -0.23
CDC45-208	ENST00000471470	SPTLC1	O15269	473 aa		13.61	□□□□□ -0.23
CDC45-208	ENST00000471470	TADA2A	O75478	443 aa		13.61	□□□□□ -0.23
CDC45-208	ENST00000471470	CA3	P07451	260 aa		13.61	□□□□□ -0.23
CDC45-208	ENST00000471470	FAM163B	P0C2L3	166 aa		13.61	□□□□□ -0.23
CDC45-208	ENST00000471470	SLC9A1	P19634	815 aa		13.61	□□□□□ -0.23
CDC45-208	ENST00000471470	RFX1	P22670	979 aa		13.61	□□□□□ -0.23
CDC45-208	ENST00000471470	MRE11	P49959	708 aa		13.61	□□□□□ -0.23
CDC45-208	ENST00000471470	ZNF75D	P51815	510 aa		13.61	□□□□□ -0.23
CDC45-208	ENST00000471470	ELAVL2	Q12926	359 aa	Known RBP	13.61	□□□□□ -0.23
CDC45-208	ENST00000471470	WDR72	Q3MJ13	1102 aa		13.61	□□□□□ -0.23
CDC45-208	ENST00000471470	ZNF667	Q5HYK9	610 aa		13.61	□□□□□ -0.23
CDC45-208	ENST00000471470	PRPF38B	Q5VTL8	546 aa	Known RBP	13.61	□□□□□ -0.23
CDC45-208	ENST00000471470	DPH6	Q7L8W6	267 aa		13.61	□□□□□ -0.23
CDC45-208	ENST00000471470	RABGGTA	Q92696	567 aa		13.61	□□□□□ -0.23
CDC45-208	ENST00000471470	IQCD	Q96DY2	449 aa		13.61	□□□□□ -0.23
CDC45-208	ENST00000471470	IGSF21	Q96ID5	467 aa		13.61	□□□□□ -0.23
CDC45-208	ENST00000471470	SUSD3	Q96L08	255 aa		13.61	□□□□□ -0.23
CDC45-208	ENST00000471470	PI4K2A	Q9BTU6	479 aa		13.61	□□□□□ -0.23
CDC45-208	ENST00000471470	PLVAP	Q9BX97	442 aa		13.61	□□□□□ -0.23
CDC45-208	ENST00000471470	PBX4	Q9BYU1	374 aa		13.61	□□□□□ -0.23
CDC45-208	ENST00000471470	NIF3L1	Q9GZT8	377 aa		13.61	□□□□□ -0.23
CDC45-208	ENST00000471470	FAM124B	Q9H5Z6	455 aa	Predicted RBP	13.61	□□□□□ -0.23
CDC45-208	ENST00000471470	MARCH5	Q9NX47	278 aa		13.61	□□□□□ -0.23
CDC45-208	ENST00000471470	FBXL5	Q9UKA1	691 aa		13.61	□□□□□ -0.23
CDC45-208	ENST00000471470	SF3B1	O75533	1304 aa	Known RBP eCLIP	13.61	□□□□□ -0.23	5e-10	■■■■■ 34.4
CDC45-208	ENST00000471470	C5orf67	F2Z3F1	127 aa		13.6	□□□□□ -0.23
CDC45-208	ENST00000471470		M0QZQ0	153 aa		13.6	□□□□□ -0.23
CDC45-208	ENST00000471470	LRRN2	O75325	713 aa		13.6	□□□□□ -0.23
CDC45-208	ENST00000471470	EFEMP2	O95967	443 aa		13.6	□□□□□ -0.23
CDC45-208	ENST00000471470	RB1	P06400	928 aa		13.6	□□□□□ -0.23
CDC45-208	ENST00000471470	MYOG	P15173	224 aa		13.6	□□□□□ -0.23
CDC45-208	ENST00000471470	TBXAS1	P24557	533 aa	Predicted RBP	13.6	□□□□□ -0.23
CDC45-208	ENST00000471470	BMPR1A	P36894	532 aa		13.6	□□□□□ -0.23
CDC45-208	ENST00000471470	TNNC1	P63316	161 aa		13.6	□□□□□ -0.23
CDC45-208	ENST00000471470	PLCB3	Q01970	1234 aa		13.6	□□□□□ -0.23
CDC45-208	ENST00000471470	GCNT1	Q02742	428 aa		13.6	□□□□□ -0.23
CDC45-208	ENST00000471470	LRIT3	Q3SXY7	679 aa		13.6	□□□□□ -0.23
CDC45-208	ENST00000471470	DPY19L2P1	Q6NXN4	242 aa		13.6	□□□□□ -0.23
CDC45-208	ENST00000471470	DSTYK	Q6XUX3	929 aa		13.6	□□□□□ -0.23
CDC45-208	ENST00000471470	ENOSF1	Q7L5Y1	443 aa		13.6	□□□□□ -0.23
CDC45-208	ENST00000471470	LIMS2	Q7Z4I7	341 aa		13.6	□□□□□ -0.23
CDC45-208	ENST00000471470	TOP6BL	Q8N6T0	577 aa		13.6	□□□□□ -0.23
CDC45-208	ENST00000471470	SPATA18	Q8TC71	538 aa		13.6	□□□□□ -0.23
CDC45-208	ENST00000471470	JAKMIP2	Q96AA8	810 aa		13.6	□□□□□ -0.23
CDC45-208	ENST00000471470	TMEM169	Q96HH4	297 aa		13.6	□□□□□ -0.23
CDC45-208	ENST00000471470	PCMTD1	Q96MG8	357 aa	Predicted RBP	13.6	□□□□□ -0.23
CDC45-208	ENST00000471470	TGS1	Q96RS0	853 aa	Known RBP	13.6	□□□□□ -0.23
CDC45-208	ENST00000471470	LSM14B	Q9BX40	385 aa	Known RBP	13.6	□□□□□ -0.23
CDC45-208	ENST00000471470	APOBEC3G	Q9HC16	384 aa	Known RBP	13.6	□□□□□ -0.23
CDC45-208	ENST00000471470	SIX2	Q9NPC8	291 aa		13.6	□□□□□ -0.23
CDC45-208	ENST00000471470	APEX2	Q9UBZ4	518 aa		13.6	□□□□□ -0.23
CDC45-208	ENST00000471470	YBX2	Q9Y2T7	364 aa	Known RBP	13.6	□□□□□ -0.23
CDC45-208	ENST00000471470	SNX9	Q9Y5X1	595 aa		13.6	□□□□□ -0.23
CDC45-208	ENST00000471470	ITIH6	Q6UXX5	1313 aa		13.6	□□□□□ -0.23
CDC45-208	ENST00000471470	NT5C1B-RDH14	C9J2C7	533 aa		13.59	□□□□□ -0.23
CDC45-208	ENST00000471470		F8W810	466 aa		13.59	□□□□□ -0.23
CDC45-208	ENST00000471470	HUS1	O60921	280 aa		13.59	□□□□□ -0.23
CDC45-208	ENST00000471470	CLSTN1	O94985	981 aa		13.59	□□□□□ -0.23
CDC45-208	ENST00000471470	ITGB1	P05556	798 aa		13.59	□□□□□ -0.23
CDC45-208	ENST00000471470	ODC1	P11926	461 aa		13.59	□□□□□ -0.23
CDC45-208	ENST00000471470	TYMP	P19971	482 aa		13.59	□□□□□ -0.23
CDC45-208	ENST00000471470	CTNNB1	P35222	781 aa		13.59	□□□□□ -0.23
CDC45-208	ENST00000471470	PBX2	P40425	430 aa		13.59	□□□□□ -0.23
CDC45-208	ENST00000471470	PBX3	P40426	434 aa		13.59	□□□□□ -0.23
CDC45-208	ENST00000471470	ASPA	P45381	313 aa		13.59	□□□□□ -0.23
CDC45-208	ENST00000471470	ERVK-21	P61565	698 aa		13.59	□□□□□ -0.23
CDC45-208	ENST00000471470	KRT17	Q04695	432 aa		13.59	□□□□□ -0.23
CDC45-208	ENST00000471470	LRMP	Q12912	555 aa		13.59	□□□□□ -0.23
CDC45-208	ENST00000471470	CUL2	Q13617	745 aa		13.59	□□□□□ -0.23
CDC45-208	ENST00000471470	TIGD5	Q53EQ6	642 aa		13.59	□□□□□ -0.23
CDC45-208	ENST00000471470	FIGN	Q5HY92	759 aa		13.59	□□□□□ -0.23
CDC45-208	ENST00000471470	KLHDC7A	Q5VTJ3	777 aa		13.59	□□□□□ -0.23
CDC45-208	ENST00000471470	SPOPL	Q6IQ16	392 aa		13.59	□□□□□ -0.23
CDC45-208	ENST00000471470	PHLDB3	Q6NSJ2	640 aa		13.59	□□□□□ -0.23
CDC45-208	ENST00000471470	FUT10	Q6P4F1	479 aa		13.59	□□□□□ -0.23
CDC45-208	ENST00000471470	TMEM173	Q86WV6	379 aa	Predicted RBP	13.59	□□□□□ -0.23
CDC45-208	ENST00000471470	VSTM4	Q8IW00	320 aa		13.59	□□□□□ -0.23
CDC45-208	ENST00000471470	RNF168	Q8IYW5	571 aa	Predicted RBP	13.59	□□□□□ -0.23
CDC45-208	ENST00000471470	TTC39C	Q8N584	583 aa		13.59	□□□□□ -0.23
CDC45-208	ENST00000471470	NEK11	Q8NG66	645 aa		13.59	□□□□□ -0.23
CDC45-208	ENST00000471470	BCL7C	Q8WUZ0	217 aa	Predicted RBP	13.59	□□□□□ -0.23
CDC45-208	ENST00000471470	SENP8	Q96LD8	212 aa		13.59	□□□□□ -0.23
CDC45-208	ENST00000471470	NUP58	Q9BVL2	599 aa		13.59	□□□□□ -0.23
CDC45-208	ENST00000471470	BCO2	Q9BYV7	579 aa		13.59	□□□□□ -0.23
CDC45-208	ENST00000471470	GAN	Q9H2C0	597 aa		13.59	□□□□□ -0.23
CDC45-208	ENST00000471470	CYP3A43	Q9HB55	503 aa		13.59	□□□□□ -0.23
CDC45-208	ENST00000471470	NXF1	Q9UBU9	619 aa	Known RBP	13.59	□□□□□ -0.23
CDC45-208	ENST00000471470	DSE	Q9UL01	958 aa		13.59	□□□□□ -0.23
CDC45-208	ENST00000471470	PCDHB8	Q9UN66	801 aa		13.59	□□□□□ -0.23
CDC45-208	ENST00000471470	CYB561D2	O14569	222 aa		13.58	□□□□□ -0.24
CDC45-208	ENST00000471470	SYN3	O14994	580 aa		13.58	□□□□□ -0.24
CDC45-208	ENST00000471470	TACC1	O75410	805 aa		13.58	□□□□□ -0.24
CDC45-208	ENST00000471470	FGF18	O76093	207 aa		13.58	□□□□□ -0.24
CDC45-208	ENST00000471470	CYP11A1	P05108	521 aa		13.58	□□□□□ -0.24
CDC45-208	ENST00000471470	UCHL3	P15374	230 aa		13.58	□□□□□ -0.24
CDC45-208	ENST00000471470	IGFBP6	P24592	240 aa	Predicted RBP	13.58	□□□□□ -0.24
CDC45-208	ENST00000471470	BRCC3	P46736	316 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms