RNA–Protein interactions for RNA: ENST00000471165.1

CLIP4-209, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 377 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-209ENST00000471165 IGKV3-20P01619 116 aa3.83□□□□□ -1.8
CLIP4-209ENST00000471165 CD40P25942 277 aa3.83□□□□□ -1.8
CLIP4-209ENST00000471165 NOMO3P69849 1222 aa3.83□□□□□ -1.8
CLIP4-209ENST00000471165 NOMO1Q15155 1222 aa3.83□□□□□ -1.8
CLIP4-209ENST00000471165 LONRF2Q1L5Z9 754 aa3.83□□□□□ -1.8
CLIP4-209ENST00000471165 TRIM71Q2Q1W2 868 aaKnown RBP3.83□□□□□ -1.8
CLIP4-209ENST00000471165 NOMO2Q5JPE7 1267 aa3.83□□□□□ -1.8
CLIP4-209ENST00000471165 ZNF496Q96IT1 587 aaPredicted RBP3.83□□□□□ -1.8
CLIP4-209ENST00000471165 KLC4Q9NSK0 619 aa3.83□□□□□ -1.8
CLIP4-209ENST00000471165 TOPBP1Q92547 1522 aa3.83□□□□□ -1.8
CLIP4-209ENST00000471165 KIF13AQ9H1H9 1805 aa3.82□□□□□ -1.8
CLIP4-209ENST00000471165 PRSS38A1L453 326 aa3.82□□□□□ -1.8
CLIP4-209ENST00000471165 IFITM10A6NMD0 228 aa3.82□□□□□ -1.8
CLIP4-209ENST00000471165 PDPK1O15530 556 aa3.82□□□□□ -1.8
CLIP4-209ENST00000471165 BRINP1O60477 761 aa3.82□□□□□ -1.8
CLIP4-209ENST00000471165 EBLN1P0CF75 366 aa3.82□□□□□ -1.8
CLIP4-209ENST00000471165 ATP5JP18859 108 aa3.82□□□□□ -1.8
CLIP4-209ENST00000471165 HSPA2P54652 639 aa3.82□□□□□ -1.8
CLIP4-209ENST00000471165 SP140Q13342 867 aa3.82□□□□□ -1.8
CLIP4-209ENST00000471165 LYSMD2Q8IV50 215 aa3.82□□□□□ -1.8
CLIP4-209ENST00000471165 NUP133Q8WUM0 1156 aa3.82□□□□□ -1.8
CLIP4-209ENST00000471165 COQ8BQ96D53 544 aa3.82□□□□□ -1.8
CLIP4-209ENST00000471165 ZC3H10Q96K80 434 aaKnown RBP3.82□□□□□ -1.8
CLIP4-209ENST00000471165 C5orf34Q96MH7 638 aa3.82□□□□□ -1.8
CLIP4-209ENST00000471165 TRIM39Q9HCM9 518 aa3.82□□□□□ -1.8
CLIP4-209ENST00000471165 B4GALT6Q9UBX8 382 aa3.82□□□□□ -1.8
CLIP4-209ENST00000471165 PRSS50Q9UI38 385 aa3.82□□□□□ -1.8
CLIP4-209ENST00000471165 TMPRSS11EQ9UL52 423 aa3.82□□□□□ -1.8
CLIP4-209ENST00000471165 RAD54L2Q9Y4B4 1467 aa3.81□□□□□ -1.8
CLIP4-209ENST00000471165 PRAMEF33A0A0G2JMD5 474 aa3.81□□□□□ -1.8
CLIP4-209ENST00000471165 PRAMEF10O60809 474 aa3.81□□□□□ -1.8
CLIP4-209ENST00000471165 ABLIM3O94929 683 aa3.81□□□□□ -1.8
CLIP4-209ENST00000471165 RAP2AP10114 183 aa3.81□□□□□ -1.8
CLIP4-209ENST00000471165 NR2F6P10588 404 aa3.81□□□□□ -1.8
CLIP4-209ENST00000471165 PRF1P14222 555 aa3.81□□□□□ -1.8
CLIP4-209ENST00000471165 LRRC32Q14392 662 aa3.81□□□□□ -1.8
CLIP4-209ENST00000471165 RBMS2Q15434 407 aaKnown RBP3.81□□□□□ -1.8
CLIP4-209ENST00000471165 ZNF529Q6P280 563 aa3.81□□□□□ -1.8
CLIP4-209ENST00000471165 PBKQ96KB5 322 aa3.81□□□□□ -1.8
CLIP4-209ENST00000471165 MSRAQ9UJ68 235 aa3.81□□□□□ -1.8
CLIP4-209ENST00000471165 MSRB2Q9Y3D2 182 aa3.81□□□□□ -1.8
CLIP4-209ENST00000471165 NUMBLQ9Y6R0 609 aa3.81□□□□□ -1.8
CLIP4-209ENST00000471165 ADGRA2Q96PE1 1338 aa3.8□□□□□ -1.8
CLIP4-209ENST00000471165 PPP3CBP16298 524 aa3.8□□□□□ -1.8
CLIP4-209ENST00000471165 HNRNPMP52272 730 aaKnown RBP eCLIP3.8□□□□□ -1.8
CLIP4-209ENST00000471165 RPS7P62081 194 aaKnown RBP3.8□□□□□ -1.8
CLIP4-209ENST00000471165 FPGSQ05932 587 aa3.8□□□□□ -1.8
CLIP4-209ENST00000471165 SLFN5Q08AF3 891 aa3.8□□□□□ -1.8
CLIP4-209ENST00000471165 PITRM1Q5JRX3 1037 aa3.8□□□□□ -1.8
CLIP4-209ENST00000471165 SLC41A1Q8IVJ1 513 aa3.8□□□□□ -1.8
CLIP4-209ENST00000471165 C8orf58Q8NAV2 365 aa3.8□□□□□ -1.8
CLIP4-209ENST00000471165 OXSMQ9NWU1 459 aa3.8□□□□□ -1.8
CLIP4-209ENST00000471165 SOGA1O94964 1423 aa3.79□□□□□ -1.8
CLIP4-209ENST00000471165 RPTORQ8N122 1335 aa3.79□□□□□ -1.8
CLIP4-209ENST00000471165 TTC3P53804 2025 aa3.79□□□□□ -1.8
CLIP4-209ENST00000471165 GSG1L2A8MUP6 293 aa3.79□□□□□ -1.8
CLIP4-209ENST00000471165 CRYABP02511 175 aaKnown RBP3.79□□□□□ -1.8
CLIP4-209ENST00000471165 CDKN2AP42771 156 aaKnown RBP3.79□□□□□ -1.8
CLIP4-209ENST00000471165 SCNN1BP51168 640 aa3.79□□□□□ -1.8
CLIP4-209ENST00000471165 NXPH1P58417 271 aa3.79□□□□□ -1.8
CLIP4-209ENST00000471165 RASGRF1Q13972 1273 aa3.79□□□□□ -1.8
CLIP4-209ENST00000471165 MST1LQ2TV78 715 aa3.79□□□□□ -1.8
CLIP4-209ENST00000471165 CD300EQ496F6 205 aaPredicted RBP3.79□□□□□ -1.8
CLIP4-209ENST00000471165 SSH1Q8WYL5 1049 aa3.79□□□□□ -1.8
CLIP4-209ENST00000471165 RFKQ969G6 155 aa3.79□□□□□ -1.8
CLIP4-209ENST00000471165 FOXP1Q9H334 677 aaPredicted RBP3.79□□□□□ -1.8
CLIP4-209ENST00000471165 ZNF213O14771 459 aa3.78□□□□□ -1.8
CLIP4-209ENST00000471165 FCER1AP12319 257 aa3.78□□□□□ -1.8
CLIP4-209ENST00000471165 KRTAP10-3P60369 221 aa3.78□□□□□ -1.8
CLIP4-209ENST00000471165 ITIH3Q06033 890 aa3.78□□□□□ -1.8
CLIP4-209ENST00000471165 ZC3H12BQ5HYM0 836 aaKnown RBP3.78□□□□□ -1.8
CLIP4-209ENST00000471165 LCE1FQ5T754 118 aa3.78□□□□□ -1.8
CLIP4-209ENST00000471165 GPR158Q5T848 1215 aa3.78□□□□□ -1.8
CLIP4-209ENST00000471165 LCE3AQ5TA76 89 aa3.78□□□□□ -1.8
CLIP4-209ENST00000471165 MIS18BP1Q6P0N0 1132 aa3.78□□□□□ -1.8
CLIP4-209ENST00000471165 CLNKQ7Z7G1 428 aa3.78□□□□□ -1.8
CLIP4-209ENST00000471165 OR7D4Q8NG98 312 aa3.78□□□□□ -1.8
CLIP4-209ENST00000471165 RSAD2Q8WXG1 361 aa3.78□□□□□ -1.8
CLIP4-209ENST00000471165 MRPL4Q9BYD3 311 aaKnown RBP3.78□□□□□ -1.8
CLIP4-209ENST00000471165 H2AFY2Q9P0M6 372 aaPredicted RBP3.78□□□□□ -1.8
CLIP4-209ENST00000471165 PPP1R1BQ9UD71 204 aaPredicted RBP3.78□□□□□ -1.8
CLIP4-209ENST00000471165 TARBP1Q13395 1621 aaKnown RBP3.77□□□□□ -1.81
CLIP4-209ENST00000471165 DIP2BQ9P265 1576 aa3.77□□□□□ -1.81
CLIP4-209ENST00000471165 TTBK1Q5TCY1 1321 aaPredicted RBP3.77□□□□□ -1.81
CLIP4-209ENST00000471165 WDR17Q8IZU2 1322 aa3.77□□□□□ -1.81
CLIP4-209ENST00000471165 TRIM25Q14258 630 aaKnown RBP3.77□□□□□ -1.81
CLIP4-209ENST00000471165 HIST2H2BCQ6DN03 193 aa3.77□□□□□ -1.81
CLIP4-209ENST00000471165 UBE3BQ7Z3V4 1068 aa3.77□□□□□ -1.81
CLIP4-209ENST00000471165 FITM2Q8N6M3 262 aa3.77□□□□□ -1.81
CLIP4-209ENST00000471165 B3GALNT2Q8NCR0 500 aa3.77□□□□□ -1.81
CLIP4-209ENST00000471165 OR14C36Q8NHC7 312 aa3.77□□□□□ -1.81
CLIP4-209ENST00000471165 SERTAD4Q9NUC0 356 aa3.77□□□□□ -1.81
CLIP4-209ENST00000471165 SLC23A1Q9UHI7 598 aa3.77□□□□□ -1.81
CLIP4-209ENST00000471165 POLA1P09884 1462 aaPredicted RBP3.77□□□□□ -1.81
CLIP4-209ENST00000471165 GRIN2BQ13224 1484 aa3.77□□□□□ -1.81
CLIP4-209ENST00000471165 MAGI1Q96QZ7 1491 aaPredicted RBP3.77□□□□□ -1.81
CLIP4-209ENST00000471165 TSPOAP1O95153 1857 aa3.77□□□□□ -1.81
CLIP4-209ENST00000471165 ABCC8Q09428 1581 aa3.76□□□□□ -1.81
CLIP4-209ENST00000471165 H3BNX3 289 aa3.76□□□□□ -1.81
CLIP4-209ENST00000471165 PHF2O75151 1096 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms