RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 GTSE1Q9NYZ3 720 aa10.01□□□□□ -0.81
CCDC171-204ENST00000470191 ZMIZ1Q9ULJ6 1067 aa10.01□□□□□ -0.81
CCDC171-204ENST00000470191 FRYQ5TBA9 3013 aa10□□□□□ -0.81
CCDC171-204ENST00000470191 ARHGEF35A5YM69 484 aa10□□□□□ -0.81
CCDC171-204ENST00000470191 ARNTLO00327 626 aa10□□□□□ -0.81
CCDC171-204ENST00000470191 DPYSL4O14531 572 aa10□□□□□ -0.81
CCDC171-204ENST00000470191 TM4SF5O14894 197 aa10□□□□□ -0.81
CCDC171-204ENST00000470191 GIPC1O14908 333 aa10□□□□□ -0.81
CCDC171-204ENST00000470191 CHADO15335 359 aa10□□□□□ -0.81
CCDC171-204ENST00000470191 NEMFO60524 1076 aa10□□□□□ -0.81
CCDC171-204ENST00000470191 FOXD2O60548 495 aaPredicted RBP10□□□□□ -0.81
CCDC171-204ENST00000470191 RPP40O75818 363 aaKnown RBP10□□□□□ -0.81
CCDC171-204ENST00000470191 PROS1P07225 676 aa10□□□□□ -0.81
CCDC171-204ENST00000470191 OR4Q2P0C623 313 aa10□□□□□ -0.81
CCDC171-204ENST00000470191 ZNF806P0C7X5 589 aa10□□□□□ -0.81
CCDC171-204ENST00000470191 SPATA31C1P0DKV0 1188 aa10□□□□□ -0.81
CCDC171-204ENST00000470191 CTHP32929 405 aa10□□□□□ -0.81
CCDC171-204ENST00000470191 MCM4P33991 863 aa10□□□□□ -0.81
CCDC171-204ENST00000470191 NAMPTP43490 491 aa10□□□□□ -0.81
CCDC171-204ENST00000470191 TNK2Q07912 1038 aa10□□□□□ -0.81
CCDC171-204ENST00000470191 SCRN1Q12765 414 aa10□□□□□ -0.81
CCDC171-204ENST00000470191 FOXC1Q12948 553 aa10□□□□□ -0.81
CCDC171-204ENST00000470191 RNF43Q68DV7 783 aa10□□□□□ -0.81
CCDC171-204ENST00000470191 PADI6Q6TGC4 694 aa10□□□□□ -0.81
CCDC171-204ENST00000470191 CATSPER3Q86XQ3 398 aa10□□□□□ -0.81
CCDC171-204ENST00000470191 ZMAT2Q96NC0 199 aaKnown RBP10□□□□□ -0.81
CCDC171-204ENST00000470191 CCDC94Q9BW85 323 aaPredicted RBP10□□□□□ -0.81
CCDC171-204ENST00000470191 C8orf33Q9H7E9 229 aaPredicted RBP10□□□□□ -0.81
CCDC171-204ENST00000470191 ZSWIM6Q9HCJ5 1215 aa10□□□□□ -0.81
CCDC171-204ENST00000470191 TIMM13Q9Y5L4 95 aaPredicted RBP10□□□□□ -0.81
CCDC171-204ENST00000470191 SDK1Q7Z5N4 2213 aa10□□□□□ -0.81
CCDC171-204ENST00000470191 BAHCC1Q9P281 2608 aa10□□□□□ -0.81
CCDC171-204ENST00000470191 F5P12259 2224 aa9.99□□□□□ -0.81
CCDC171-204ENST00000470191 MYH11P35749 1972 aa9.99□□□□□ -0.81
CCDC171-204ENST00000470191 SOAT2O75908 522 aa9.99□□□□□ -0.81
CCDC171-204ENST00000470191 CDKL5O76039 1030 aa9.99□□□□□ -0.81
CCDC171-204ENST00000470191 MICAL2O94851 1124 aa9.99□□□□□ -0.81
CCDC171-204ENST00000470191 EPN2O95208 641 aa9.99□□□□□ -0.81
CCDC171-204ENST00000470191 TOP3BO95985 862 aaKnown RBP9.99□□□□□ -0.81
CCDC171-204ENST00000470191 MCM7P33993 719 aa9.99□□□□□ -0.81
CCDC171-204ENST00000470191 NOVA1P51513 510 aaKnown RBP9.99□□□□□ -0.81
CCDC171-204ENST00000470191 LIMK1P53667 647 aa9.99□□□□□ -0.81
CCDC171-204ENST00000470191 SHC2P98077 582 aa9.99□□□□□ -0.81
CCDC171-204ENST00000470191 ZNF568Q3ZCX4 644 aa9.99□□□□□ -0.81
CCDC171-204ENST00000470191 SEZ6Q53EL9 994 aa9.99□□□□□ -0.81
CCDC171-204ENST00000470191 DGKKQ5KSL6 1271 aa9.99□□□□□ -0.81
CCDC171-204ENST00000470191 TPGS2Q68CL5 300 aa9.99□□□□□ -0.81
CCDC171-204ENST00000470191 ZNF280DQ6N043 979 aa9.99□□□□□ -0.81
CCDC171-204ENST00000470191 UNQ6494/PRO21346Q6UXR6 183 aa9.99□□□□□ -0.81
CCDC171-204ENST00000470191 CACNA2D4Q7Z3S7 1137 aa9.99□□□□□ -0.81
CCDC171-204ENST00000470191 ARID3BQ8IVW6 561 aaPredicted RBP9.99□□□□□ -0.81
CCDC171-204ENST00000470191 FAM177A1Q8N128 213 aaPredicted RBP9.99□□□□□ -0.81
CCDC171-204ENST00000470191 GAB3Q8WWW8 586 aa9.99□□□□□ -0.81
CCDC171-204ENST00000470191 MARVELD3Q96A59 401 aa9.99□□□□□ -0.81
CCDC171-204ENST00000470191 IFT74Q96LB3 600 aa9.99□□□□□ -0.81
CCDC171-204ENST00000470191 TBC1D32Q96NH3 1257 aa9.99□□□□□ -0.81
CCDC171-204ENST00000470191 LRRC3BQ96PB8 259 aa9.99□□□□□ -0.81
CCDC171-204ENST00000470191 CDT1Q9H211 546 aa9.99□□□□□ -0.81
CCDC171-204ENST00000470191 TMEM60Q9H2L4 133 aa9.99□□□□□ -0.81
CCDC171-204ENST00000470191 TRPV4Q9HBA0 871 aa9.99□□□□□ -0.81
CCDC171-204ENST00000470191 BRMS1Q9HCU9 246 aa9.99□□□□□ -0.81
CCDC171-204ENST00000470191 TOPORSQ9NS56 1045 aaPredicted RBP9.99□□□□□ -0.81
CCDC171-204ENST00000470191 PDRG1Q9NUG6 133 aa9.99□□□□□ -0.81
CCDC171-204ENST00000470191 ORC3Q9UBD5 711 aaPredicted RBP9.99□□□□□ -0.81
CCDC171-204ENST00000470191 AFF4Q9UHB7 1163 aaKnown RBP9.99□□□□□ -0.81
CCDC171-204ENST00000470191 SLC27A5Q9Y2P5 690 aa9.99□□□□□ -0.81
CCDC171-204ENST00000470191 YIPF1Q9Y548 306 aa9.99□□□□□ -0.81
CCDC171-204ENST00000470191 MYO16Q9Y6X6 1858 aa9.99□□□□□ -0.81
CCDC171-204ENST00000470191 NUP205Q92621 2012 aa9.99□□□□□ -0.81
CCDC171-204ENST00000470191 TCHHQ07283 1943 aa9.98□□□□□ -0.81
CCDC171-204ENST00000470191 DENND4CQ5VZ89 1909 aa9.98□□□□□ -0.81
CCDC171-204ENST00000470191 MYBPHLA2RUH7 354 aa9.98□□□□□ -0.81
CCDC171-204ENST00000470191 CCDC169A6NNP5 214 aa9.98□□□□□ -0.81
CCDC171-204ENST00000470191 K7ERI5 159 aa9.98□□□□□ -0.81
CCDC171-204ENST00000470191 SYN3O14994 580 aa9.98□□□□□ -0.81
CCDC171-204ENST00000470191 PAPSS2O95340 614 aaPredicted RBP9.98□□□□□ -0.81
CCDC171-204ENST00000470191 XRCC6P12956 609 aaKnown RBP eCLIP9.98□□□□□ -0.81
CCDC171-204ENST00000470191 CYP11B2P19099 503 aa9.98□□□□□ -0.81
CCDC171-204ENST00000470191 MARCKSP29966 332 aaPredicted RBP9.98□□□□□ -0.81
CCDC171-204ENST00000470191 MPLP40238 635 aa9.98□□□□□ -0.81
CCDC171-204ENST00000470191 GRM5P41594 1212 aa9.98□□□□□ -0.81
CCDC171-204ENST00000470191 SPAG1Q07617 926 aa9.98□□□□□ -0.81
CCDC171-204ENST00000470191 DUSP4Q13115 394 aa9.98□□□□□ -0.81
CCDC171-204ENST00000470191 MRPL58Q14197 206 aaKnown RBP9.98□□□□□ -0.81
CCDC171-204ENST00000470191 PPP2R5AQ15172 486 aa9.98□□□□□ -0.81
CCDC171-204ENST00000470191 GPR158Q5T848 1215 aa9.98□□□□□ -0.81
CCDC171-204ENST00000470191 HAUS6Q7Z4H7 955 aa9.98□□□□□ -0.81
CCDC171-204ENST00000470191 APBB1IPQ7Z5R6 666 aaPredicted RBP9.98□□□□□ -0.81
CCDC171-204ENST00000470191 RALGPS2Q86X27 583 aaPredicted RBP9.98□□□□□ -0.81
CCDC171-204ENST00000470191 DDX12PQ92771 950 aa9.98□□□□□ -0.81
CCDC171-204ENST00000470191 E2F7Q96AV8 911 aa9.98□□□□□ -0.81
CCDC171-204ENST00000470191 SUSD3Q96L08 255 aa9.98□□□□□ -0.81
CCDC171-204ENST00000470191 NACC1Q96RE7 527 aa9.98□□□□□ -0.81
CCDC171-204ENST00000470191 TCHPQ9BT92 498 aa9.98□□□□□ -0.81
CCDC171-204ENST00000470191 EDEM2Q9BV94 578 aa9.98□□□□□ -0.81
CCDC171-204ENST00000470191 LSM14BQ9BX40 385 aaKnown RBP9.98□□□□□ -0.81
CCDC171-204ENST00000470191 GPR88Q9GZN0 384 aa9.98□□□□□ -0.81
CCDC171-204ENST00000470191 SMG9Q9H0W8 520 aaKnown RBP9.98□□□□□ -0.81
CCDC171-204ENST00000470191 CRISPLD1Q9H336 500 aa9.98□□□□□ -0.81
CCDC171-204ENST00000470191 ATXN3LQ9H3M9 355 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms