RNA–Protein interactions for RNA: ENST00000469498.1

GAPVD1-213, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 385 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-213ENST00000469498 DPP3Q9NY33 737 aa9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 GCNT4Q9P109 453 aa9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 UBQLN1Q9UMX0 589 aaKnown RBP9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 DERAQ9Y315 318 aa9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 PATJQ8NI35 1801 aa9.05□□□□□ -0.96
GAPVD1-213ENST00000469498 PPEF2O14830 753 aa9.04□□□□□ -0.96
GAPVD1-213ENST00000469498 INPPL1O15357 1258 aa9.04□□□□□ -0.96
GAPVD1-213ENST00000469498 DGKIO75912 1065 aa9.04□□□□□ -0.96
GAPVD1-213ENST00000469498 C4BPAP04003 597 aaKnown RBP9.04□□□□□ -0.96
GAPVD1-213ENST00000469498 TPM3P06753 285 aa9.04□□□□□ -0.96
GAPVD1-213ENST00000469498 GTF2H1P32780 548 aa9.04□□□□□ -0.96
GAPVD1-213ENST00000469498 MRE11P49959 708 aa9.04□□□□□ -0.96
GAPVD1-213ENST00000469498 ZNF75DP51815 510 aa9.04□□□□□ -0.96
GAPVD1-213ENST00000469498 AP3M2P53677 418 aa9.04□□□□□ -0.96
GAPVD1-213ENST00000469498 APBA1Q02410 837 aa9.04□□□□□ -0.96
GAPVD1-213ENST00000469498 SYCP1Q15431 976 aa9.04□□□□□ -0.96
GAPVD1-213ENST00000469498 SKIV2LQ15477 1246 aaKnown RBP9.04□□□□□ -0.96
GAPVD1-213ENST00000469498 NAB2Q15742 525 aa9.04□□□□□ -0.96
GAPVD1-213ENST00000469498 DUOXA2Q1HG44 320 aa9.04□□□□□ -0.96
GAPVD1-213ENST00000469498 EPC2Q52LR7 807 aa9.04□□□□□ -0.96
GAPVD1-213ENST00000469498 GBP6Q6ZN66 633 aa9.04□□□□□ -0.96
GAPVD1-213ENST00000469498 TRAPPC11Q7Z392 1133 aa9.04□□□□□ -0.96
GAPVD1-213ENST00000469498 NT5DC4Q86YG4 428 aa9.04□□□□□ -0.96
GAPVD1-213ENST00000469498 ZNF280BQ86YH2 543 aa9.04□□□□□ -0.96
GAPVD1-213ENST00000469498 LRRC43Q8N309 656 aa9.04□□□□□ -0.96
GAPVD1-213ENST00000469498 C1orf127Q8N9H9 656 aa9.04□□□□□ -0.96
GAPVD1-213ENST00000469498 SEMA4DQ92854 862 aa9.04□□□□□ -0.96
GAPVD1-213ENST00000469498 TOP1MTQ969P6 601 aa9.04□□□□□ -0.96
GAPVD1-213ENST00000469498 PCMTD1Q96MG8 357 aaPredicted RBP9.04□□□□□ -0.96
GAPVD1-213ENST00000469498 FAM193BQ96PV7 902 aaPredicted RBP9.04□□□□□ -0.96
GAPVD1-213ENST00000469498 SLC9A7Q96T83 725 aa9.04□□□□□ -0.96
GAPVD1-213ENST00000469498 PI4K2AQ9BTU6 479 aa9.04□□□□□ -0.96
GAPVD1-213ENST00000469498 LSM14BQ9BX40 385 aaKnown RBP9.04□□□□□ -0.96
GAPVD1-213ENST00000469498 MRPL9Q9BYD2 267 aaKnown RBP9.04□□□□□ -0.96
GAPVD1-213ENST00000469498 UBE2OQ9C0C9 1292 aaKnown RBP9.04□□□□□ -0.96
GAPVD1-213ENST00000469498 INTS2Q9H0H0 1204 aaKnown RBP9.04□□□□□ -0.96
GAPVD1-213ENST00000469498 SLC38A7Q9NVC3 462 aa9.04□□□□□ -0.96
GAPVD1-213ENST00000469498 DNAJB4Q9UDY4 337 aa9.04□□□□□ -0.96
GAPVD1-213ENST00000469498 SIX4Q9UIU6 781 aa9.04□□□□□ -0.96
GAPVD1-213ENST00000469498 ITGA11Q9UKX5 1188 aa9.04□□□□□ -0.96
GAPVD1-213ENST00000469498 SLC4A7Q9Y6M7 1214 aa9.04□□□□□ -0.96
GAPVD1-213ENST00000469498 MTCL1Q9Y4B5 1905 aaKnown RBP9.03□□□□□ -0.96
GAPVD1-213ENST00000469498 MYO9BQ13459 2157 aa9.03□□□□□ -0.96
GAPVD1-213ENST00000469498 LRRC10BA6NIK2 292 aa9.03□□□□□ -0.96
GAPVD1-213ENST00000469498 PODXLO00592 558 aa9.03□□□□□ -0.96
GAPVD1-213ENST00000469498 ZC3H11AO75152 810 aaKnown RBP eCLIP9.03□□□□□ -0.96
GAPVD1-213ENST00000469498 DDHD2O94830 711 aa9.03□□□□□ -0.96
GAPVD1-213ENST00000469498 ADCY5O95622 1261 aa9.03□□□□□ -0.96
GAPVD1-213ENST00000469498 ATP2A2P16615 1042 aaKnown RBP9.03□□□□□ -0.96
GAPVD1-213ENST00000469498 NDUFV2P19404 249 aa9.03□□□□□ -0.96
GAPVD1-213ENST00000469498 SLC9A1P19634 815 aa9.03□□□□□ -0.96
GAPVD1-213ENST00000469498 MCCD1P59942 119 aaPredicted RBP9.03□□□□□ -0.96
GAPVD1-213ENST00000469498 MYL6P60660 151 aa9.03□□□□□ -0.96
GAPVD1-213ENST00000469498 USP46P62068 366 aa9.03□□□□□ -0.96
GAPVD1-213ENST00000469498 LRMPQ12912 555 aa9.03□□□□□ -0.96
GAPVD1-213ENST00000469498 TUSC3Q13454 348 aa9.03□□□□□ -0.96
GAPVD1-213ENST00000469498 TRPC3Q13507 836 aa9.03□□□□□ -0.96
GAPVD1-213ENST00000469498 NCOA4Q13772 614 aa9.03□□□□□ -0.96
GAPVD1-213ENST00000469498 NR1I3Q14994 352 aa9.03□□□□□ -0.96
GAPVD1-213ENST00000469498 SHHQ15465 462 aa9.03□□□□□ -0.96
GAPVD1-213ENST00000469498 ZBTB6Q15916 424 aa9.03□□□□□ -0.96
GAPVD1-213ENST00000469498 EXOC3L4Q17RC7 722 aa9.03□□□□□ -0.96
GAPVD1-213ENST00000469498 ZNF699Q32M78 642 aa9.03□□□□□ -0.96
GAPVD1-213ENST00000469498 C9orf57Q5W0N0 161 aa9.03□□□□□ -0.96
GAPVD1-213ENST00000469498 SPOPLQ6IQ16 392 aa9.03□□□□□ -0.96
GAPVD1-213ENST00000469498 TRIM65Q6PJ69 517 aa9.03□□□□□ -0.96
GAPVD1-213ENST00000469498 SCARA5Q6ZMJ2 495 aa9.03□□□□□ -0.96
GAPVD1-213ENST00000469498 HERC6Q8IVU3 1022 aa9.03□□□□□ -0.96
GAPVD1-213ENST00000469498 FBXL13Q8NEE6 735 aa9.03□□□□□ -0.96
GAPVD1-213ENST00000469498 HASPINQ8TF76 798 aa9.03□□□□□ -0.96
GAPVD1-213ENST00000469498 TSPAN18Q96SJ8 248 aa9.03□□□□□ -0.96
GAPVD1-213ENST00000469498 YME1L1Q96TA2 773 aa9.03□□□□□ -0.96
GAPVD1-213ENST00000469498 PAAF1Q9BRP4 392 aa9.03□□□□□ -0.96
GAPVD1-213ENST00000469498 RC3H2Q9HBD1 1191 aaKnown RBP9.03□□□□□ -0.96
GAPVD1-213ENST00000469498 FAM207AQ9NSI2 230 aaPredicted RBP9.03□□□□□ -0.96
GAPVD1-213ENST00000469498 AGAP1Q9UPQ3 857 aa9.03□□□□□ -0.96
GAPVD1-213ENST00000469498 SIK3Q9Y2K2 1263 aa9.03□□□□□ -0.96
GAPVD1-213ENST00000469498 R3HCC1Q9Y3T6 440 aaKnown RBP9.03□□□□□ -0.96
GAPVD1-213ENST00000469498 ZNF638Q14966 1978 aaKnown RBP9.03□□□□□ -0.96
GAPVD1-213ENST00000469498 GTPBP10A4D1E9 387 aaKnown RBP9.02□□□□□ -0.97
GAPVD1-213ENST00000469498 F8W810 466 aa9.02□□□□□ -0.97
GAPVD1-213ENST00000469498 EPHB6O15197 1021 aa9.02□□□□□ -0.97
GAPVD1-213ENST00000469498 SPTLC1O15269 473 aa9.02□□□□□ -0.97
GAPVD1-213ENST00000469498 P4HA2O15460 535 aa9.02□□□□□ -0.97
GAPVD1-213ENST00000469498 GJB5O95377 273 aa9.02□□□□□ -0.97
GAPVD1-213ENST00000469498 CST3P01034 146 aaPredicted RBP9.02□□□□□ -0.97
GAPVD1-213ENST00000469498 CYP3A5P20815 502 aa9.02□□□□□ -0.97
GAPVD1-213ENST00000469498 PON1P27169 355 aa9.02□□□□□ -0.97
GAPVD1-213ENST00000469498 PBX3P40426 434 aa9.02□□□□□ -0.97
GAPVD1-213ENST00000469498 OR1G1P47890 313 aa9.02□□□□□ -0.97
GAPVD1-213ENST00000469498 RGS19P49795 217 aa9.02□□□□□ -0.97
GAPVD1-213ENST00000469498 CLCNKBP51801 687 aa9.02□□□□□ -0.97
GAPVD1-213ENST00000469498 RABGGTBP53611 331 aa9.02□□□□□ -0.97
GAPVD1-213ENST00000469498 NOP14P78316 857 aaKnown RBP9.02□□□□□ -0.97
GAPVD1-213ENST00000469498 RBP5P82980 135 aa9.02□□□□□ -0.97
GAPVD1-213ENST00000469498 DSC1Q08554 894 aa9.02□□□□□ -0.97
GAPVD1-213ENST00000469498 KCNMA1Q12791 1236 aa9.02□□□□□ -0.97
GAPVD1-213ENST00000469498 CETN1Q12798 172 aa9.02□□□□□ -0.97
GAPVD1-213ENST00000469498 BTG3Q14201 252 aaPredicted RBP9.02□□□□□ -0.97
GAPVD1-213ENST00000469498 SPOUT1Q5T280 376 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms