RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 C17orf53Q8N3J3 647 aaPredicted RBP13.76□□□□□ -0.21
RUNX1-213ENST00000469087 UBR7Q8N806 425 aa13.76□□□□□ -0.21
RUNX1-213ENST00000469087 ACP6Q9NPH0 428 aa13.76□□□□□ -0.21
RUNX1-213ENST00000469087 SLC38A7Q9NVC3 462 aa13.76□□□□□ -0.21
RUNX1-213ENST00000469087 INPP5FQ9Y2H2 1132 aa13.76□□□□□ -0.21
RUNX1-213ENST00000469087 PCDHB7Q9Y5E2 793 aa13.76□□□□□ -0.21
RUNX1-213ENST00000469087 EPN1Q9Y6I3 576 aaPredicted RBP13.76□□□□□ -0.21
RUNX1-213ENST00000469087 TDRD15B5MCY1 1934 aaKnown RBP13.76□□□□□ -0.21
RUNX1-213ENST00000469087 TTC3P53804 2025 aa13.76□□□□□ -0.21
RUNX1-213ENST00000469087 SSU72P8A0A1W2PR75 194 aa13.76□□□□□ -0.21
RUNX1-213ENST00000469087 CLCNKBP51801 687 aa13.76□□□□□ -0.21
RUNX1-213ENST00000469087 MYO1EQ12965 1108 aa13.76□□□□□ -0.21
RUNX1-213ENST00000469087 MAPK8IP2Q13387 824 aaPredicted RBP13.76□□□□□ -0.21
RUNX1-213ENST00000469087 IKBKEQ14164 716 aa13.76□□□□□ -0.21
RUNX1-213ENST00000469087 TDRD12Q587J7 1177 aaKnown RBP13.76□□□□□ -0.21
RUNX1-213ENST00000469087 CNKSR3Q6P9H4 555 aa13.76□□□□□ -0.21
RUNX1-213ENST00000469087 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.76□□□□□ -0.21
RUNX1-213ENST00000469087 ZNF571Q7Z3V5 609 aaPredicted RBP13.76□□□□□ -0.21
RUNX1-213ENST00000469087 LRRC52Q8N7C0 313 aa13.76□□□□□ -0.21
RUNX1-213ENST00000469087 RABGGTAQ92696 567 aa13.76□□□□□ -0.21
RUNX1-213ENST00000469087 FAXDC2Q96IV6 333 aa13.76□□□□□ -0.21
RUNX1-213ENST00000469087 CCDC42Q96M95 316 aa13.76□□□□□ -0.21
RUNX1-213ENST00000469087 BCO2Q9BYV7 579 aa13.76□□□□□ -0.21
RUNX1-213ENST00000469087 SDCBP2Q9H190 292 aa13.76□□□□□ -0.21
RUNX1-213ENST00000469087 CNTN6Q9UQ52 1028 aa13.76□□□□□ -0.21
RUNX1-213ENST00000469087 BZW2Q9Y6E2 419 aaKnown RBP13.76□□□□□ -0.21
RUNX1-213ENST00000469087 ALPK3Q96L96 1907 aa13.75□□□□□ -0.21
RUNX1-213ENST00000469087 SPTLC1O15269 473 aa13.75□□□□□ -0.21
RUNX1-213ENST00000469087 NDUFA10O95299 355 aa13.75□□□□□ -0.21
RUNX1-213ENST00000469087 KRT5P13647 590 aa13.75□□□□□ -0.21
RUNX1-213ENST00000469087 KCNJ6P48051 423 aa13.75□□□□□ -0.21
RUNX1-213ENST00000469087 TMEM270Q6UE05 265 aa13.75□□□□□ -0.21
RUNX1-213ENST00000469087 GLB1LQ6UWU2 654 aa13.75□□□□□ -0.21
RUNX1-213ENST00000469087 SCARA5Q6ZMJ2 495 aa13.75□□□□□ -0.21
RUNX1-213ENST00000469087 SLC47A2Q86VL8 602 aa13.75□□□□□ -0.21
RUNX1-213ENST00000469087 CCDC170Q8IYT3 715 aa13.75□□□□□ -0.21
RUNX1-213ENST00000469087 PAAF1Q9BRP4 392 aa13.75□□□□□ -0.21
RUNX1-213ENST00000469087 DESI2Q9BSY9 194 aa13.75□□□□□ -0.21
RUNX1-213ENST00000469087 CISHQ9NSE2 258 aa13.75□□□□□ -0.21
RUNX1-213ENST00000469087 ADAMTS1Q9UHI8 967 aa13.75□□□□□ -0.21
RUNX1-213ENST00000469087 KPNA7A9QM74 516 aa13.74□□□□□ -0.21
RUNX1-213ENST00000469087 ESPNB1AK53 854 aa13.74□□□□□ -0.21
RUNX1-213ENST00000469087 DDHD2O94830 711 aa13.74□□□□□ -0.21
RUNX1-213ENST00000469087 CALCAP01258 141 aa13.74□□□□□ -0.21
RUNX1-213ENST00000469087 CCDC172P0C7W6 258 aa13.74□□□□□ -0.21
RUNX1-213ENST00000469087 CD58P19256 250 aa13.74□□□□□ -0.21
RUNX1-213ENST00000469087 RAP1GAPP47736 663 aa13.74□□□□□ -0.21
RUNX1-213ENST00000469087 LILRA4P59901 499 aa13.74□□□□□ -0.21
RUNX1-213ENST00000469087 GRIK3Q13003 919 aa13.74□□□□□ -0.21
RUNX1-213ENST00000469087 NOMO2Q5JPE7 1267 aa13.74□□□□□ -0.21
RUNX1-213ENST00000469087 ZNF280BQ86YH2 543 aa13.74□□□□□ -0.21
RUNX1-213ENST00000469087 FMNL3Q8IVF7 1028 aa13.74□□□□□ -0.21
RUNX1-213ENST00000469087 TMEM199Q8N511 208 aa13.74□□□□□ -0.21
RUNX1-213ENST00000469087 OLIG1Q8TAK6 271 aa13.74□□□□□ -0.21
RUNX1-213ENST00000469087 MMS19Q96T76 1030 aa13.74□□□□□ -0.21
RUNX1-213ENST00000469087 SYT11Q9BT88 431 aa13.74□□□□□ -0.21
RUNX1-213ENST00000469087 SMYD3Q9H7B4 428 aa13.74□□□□□ -0.21
RUNX1-213ENST00000469087 SPTLC3Q9NUV7 552 aa13.74□□□□□ -0.21
RUNX1-213ENST00000469087 PCDHB4Q9Y5E5 795 aa13.74□□□□□ -0.21
RUNX1-213ENST00000469087 SNX9Q9Y5X1 595 aa13.74□□□□□ -0.21
RUNX1-213ENST00000469087 MICAL3Q7RTP6 2002 aa13.74□□□□□ -0.21
RUNX1-213ENST00000469087 A0A087X0T9 212 aa13.73□□□□□ -0.21
RUNX1-213ENST00000469087 CASTOR2A6NHX0 329 aa13.73□□□□□ -0.21
RUNX1-213ENST00000469087 ZNF263O14978 683 aa13.73□□□□□ -0.21
RUNX1-213ENST00000469087 AKR1B10O60218 316 aa13.73□□□□□ -0.21
RUNX1-213ENST00000469087 FAM228BP0C875 321 aa13.73□□□□□ -0.21
RUNX1-213ENST00000469087 ACRP10323 421 aa13.73□□□□□ -0.21
RUNX1-213ENST00000469087 CYP11B1P15538 503 aa13.73□□□□□ -0.21
RUNX1-213ENST00000469087 TAF6P49848 677 aa13.73□□□□□ -0.21
RUNX1-213ENST00000469087 GATMP50440 423 aa13.73□□□□□ -0.21
RUNX1-213ENST00000469087 KIF11P52732 1056 aa13.73□□□□□ -0.21
RUNX1-213ENST00000469087 GFPT1Q06210 699 aaPredicted RBP13.73□□□□□ -0.21
RUNX1-213ENST00000469087 TUSC3Q13454 348 aa13.73□□□□□ -0.21
RUNX1-213ENST00000469087 UPP1Q16831 310 aa13.73□□□□□ -0.21
RUNX1-213ENST00000469087 COL13A1Q5TAT6 717 aaPredicted RBP13.73□□□□□ -0.21
RUNX1-213ENST00000469087 ACRBPQ8NEB7 543 aa13.73□□□□□ -0.21
RUNX1-213ENST00000469087 CASD1Q96PB1 797 aa13.73□□□□□ -0.21
RUNX1-213ENST00000469087 DEF6Q9H4E7 631 aa13.73□□□□□ -0.21
RUNX1-213ENST00000469087 TRMT1Q9NXH9 659 aaKnown RBP13.73□□□□□ -0.21
RUNX1-213ENST00000469087 LRFN2Q9ULH4 789 aa13.73□□□□□ -0.21
RUNX1-213ENST00000469087 REXO2Q9Y3B8 237 aaKnown RBP13.73□□□□□ -0.21
RUNX1-213ENST00000469087 ADGRG1Q9Y653 693 aa13.73□□□□□ -0.21
RUNX1-213ENST00000469087 ABHD14A-ACY1A0A1B0GW23 586 aa13.73□□□□□ -0.21
RUNX1-213ENST00000469087 USP27XA6NNY8 438 aa13.73□□□□□ -0.21
RUNX1-213ENST00000469087 EIF3CLB5ME19 914 aaKnown RBP13.73□□□□□ -0.21
RUNX1-213ENST00000469087 PODXLO00592 558 aa13.73□□□□□ -0.21
RUNX1-213ENST00000469087 B4GALT3O60512 393 aa13.73□□□□□ -0.21
RUNX1-213ENST00000469087 P4HA1P13674 534 aa13.73□□□□□ -0.21
RUNX1-213ENST00000469087 MSNP26038 577 aaKnown RBP13.73□□□□□ -0.21
RUNX1-213ENST00000469087 RPL9P32969 192 aaKnown RBP13.73□□□□□ -0.21
RUNX1-213ENST00000469087 CYLC1P35663 651 aaPredicted RBP13.73□□□□□ -0.21
RUNX1-213ENST00000469087 PNPLA4P41247 253 aa13.73□□□□□ -0.21
RUNX1-213ENST00000469087 TNNC1P63316 161 aa13.73□□□□□ -0.21
RUNX1-213ENST00000469087 CYP27A1Q02318 531 aa13.73□□□□□ -0.21
RUNX1-213ENST00000469087 SOWAHAQ2M3V2 549 aa13.73□□□□□ -0.21
RUNX1-213ENST00000469087 ZNF394Q53GI3 561 aa13.73□□□□□ -0.21
RUNX1-213ENST00000469087 C16orf59Q7L2K0 433 aa13.73□□□□□ -0.21
RUNX1-213ENST00000469087 NOP9Q86U38 636 aaKnown RBP13.73□□□□□ -0.21
RUNX1-213ENST00000469087 RPUSD2Q8IZ73 545 aaKnown RBP13.73□□□□□ -0.21
RUNX1-213ENST00000469087 C3orf58Q8NDZ4 430 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms