RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 CHST7Q9NS84 486 aa12.12□□□□□ -0.47
MSH5-214ENST00000468602 TAB2Q9NYJ8 693 aa12.12□□□□□ -0.47
MSH5-214ENST00000468602 ADAM28Q9UKQ2 775 aa12.12□□□□□ -0.47
MSH5-214ENST00000468602 CNTN6Q9UQ52 1028 aa12.12□□□□□ -0.47
MSH5-214ENST00000468602 IRAK3Q9Y616 596 aa12.12□□□□□ -0.47
MSH5-214ENST00000468602 NLRC5Q86WI3 1866 aa12.12□□□□□ -0.47
MSH5-214ENST00000468602 VCANP13611 3396 aa12.11□□□□□ -0.47
MSH5-214ENST00000468602 KPNA7A9QM74 516 aa12.11□□□□□ -0.47
MSH5-214ENST00000468602 GABRDO14764 452 aa12.11□□□□□ -0.47
MSH5-214ENST00000468602 SPTLC1O15269 473 aa12.11□□□□□ -0.47
MSH5-214ENST00000468602 OAZ2O95190 189 aa12.11□□□□□ -0.47
MSH5-214ENST00000468602 P4HA1P13674 534 aa12.11□□□□□ -0.47
MSH5-214ENST00000468602 FGFR3P22607 806 aa12.11□□□□□ -0.47
MSH5-214ENST00000468602 TBXAS1P24557 533 aaPredicted RBP12.11□□□□□ -0.47
MSH5-214ENST00000468602 MYL6P60660 151 aa12.11□□□□□ -0.47
MSH5-214ENST00000468602 INCA1Q0VD86 236 aa12.11□□□□□ -0.47
MSH5-214ENST00000468602 TRPC3Q13507 836 aa12.11□□□□□ -0.47
MSH5-214ENST00000468602 ARID5BQ14865 1188 aa12.11□□□□□ -0.47
MSH5-214ENST00000468602 FAM109BQ6ICB4 259 aaPredicted RBP12.11□□□□□ -0.47
MSH5-214ENST00000468602 CHRDL2Q6WN34 429 aa12.11□□□□□ -0.47
MSH5-214ENST00000468602 TMCO2Q7Z6W1 182 aaPredicted RBP12.11□□□□□ -0.47
MSH5-214ENST00000468602 UBR7Q8N806 425 aa12.11□□□□□ -0.47
MSH5-214ENST00000468602 TGS1Q96RS0 853 aaKnown RBP12.11□□□□□ -0.47
MSH5-214ENST00000468602 PAAF1Q9BRP4 392 aa12.11□□□□□ -0.47
MSH5-214ENST00000468602 NAA15Q9BXJ9 866 aaKnown RBP12.11□□□□□ -0.47
MSH5-214ENST00000468602 IMPG2Q9BZV3 1241 aa12.11□□□□□ -0.47
MSH5-214ENST00000468602 TTYH3Q9C0H2 523 aa12.11□□□□□ -0.47
MSH5-214ENST00000468602 VPS16Q9H269 839 aa12.11□□□□□ -0.47
MSH5-214ENST00000468602 GOLGA2P5Q9HBQ8 144 aa12.11□□□□□ -0.47
MSH5-214ENST00000468602 SIX2Q9NPC8 291 aa12.11□□□□□ -0.47
MSH5-214ENST00000468602 SPG21Q9NZD8 308 aa12.11□□□□□ -0.47
MSH5-214ENST00000468602 GCNT4Q9P109 453 aa12.11□□□□□ -0.47
MSH5-214ENST00000468602 MSRAQ9UJ68 235 aa12.11□□□□□ -0.47
MSH5-214ENST00000468602 DSEQ9UL01 958 aa12.11□□□□□ -0.47
MSH5-214ENST00000468602 MYO6Q9UM54 1294 aa12.11□□□□□ -0.47
MSH5-214ENST00000468602 AGAP1Q9UPQ3 857 aa12.11□□□□□ -0.47
MSH5-214ENST00000468602 PCDHB12Q9Y5F1 795 aa12.11□□□□□ -0.47
MSH5-214ENST00000468602 LAMA3Q16787 3333 aa12.11□□□□□ -0.47
MSH5-214ENST00000468602 SF3B1O75533 1304 aaKnown RBP eCLIP12.11□□□□□ -0.47
MSH5-214ENST00000468602 LCHNA4D1U4 455 aa12.1□□□□□ -0.47
MSH5-214ENST00000468602 CASTOR2A6NHX0 329 aa12.1□□□□□ -0.47
MSH5-214ENST00000468602 PPEF2O14830 753 aa12.1□□□□□ -0.47
MSH5-214ENST00000468602 AP5Z1O43299 807 aa12.1□□□□□ -0.47
MSH5-214ENST00000468602 PHACTR2O75167 634 aa12.1□□□□□ -0.47
MSH5-214ENST00000468602 B3GAT3O94766 335 aa12.1□□□□□ -0.47
MSH5-214ENST00000468602 NOL4O94818 638 aa12.1□□□□□ -0.47
MSH5-214ENST00000468602 KIF4AO95239 1232 aa12.1□□□□□ -0.47
MSH5-214ENST00000468602 SERPINC1P01008 464 aa12.1□□□□□ -0.47
MSH5-214ENST00000468602 CDC25BP30305 580 aa12.1□□□□□ -0.47
MSH5-214ENST00000468602 ASPAP45381 313 aa12.1□□□□□ -0.47
MSH5-214ENST00000468602 GUCY2FP51841 1108 aa12.1□□□□□ -0.47
MSH5-214ENST00000468602 NOP14P78316 857 aaKnown RBP12.1□□□□□ -0.47
MSH5-214ENST00000468602 TAP1Q03518 808 aa12.1□□□□□ -0.47
MSH5-214ENST00000468602 UBXN1Q04323 297 aa12.1□□□□□ -0.47
MSH5-214ENST00000468602 BIRC3Q13489 604 aa12.1□□□□□ -0.47
MSH5-214ENST00000468602 HSP90AA4PQ58FG1 418 aa12.1□□□□□ -0.47
MSH5-214ENST00000468602 ZNF667Q5HYK9 610 aa12.1□□□□□ -0.47
MSH5-214ENST00000468602 WDR44Q5JSH3 913 aa12.1□□□□□ -0.47
MSH5-214ENST00000468602 KLHDC7AQ5VTJ3 777 aa12.1□□□□□ -0.47
MSH5-214ENST00000468602 SCARA3Q6AZY7 606 aa12.1□□□□□ -0.47
MSH5-214ENST00000468602 PDE12Q6L8Q7 609 aaKnown RBP12.1□□□□□ -0.47
MSH5-214ENST00000468602 PDXDC1Q6P996 788 aa12.1□□□□□ -0.47
MSH5-214ENST00000468602 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.1□□□□□ -0.47
MSH5-214ENST00000468602 CCDC150Q8NCX0 1101 aa12.1□□□□□ -0.47
MSH5-214ENST00000468602 NUP58Q9BVL2 599 aa12.1□□□□□ -0.47
MSH5-214ENST00000468602 NIF3L1Q9GZT8 377 aa12.1□□□□□ -0.47
MSH5-214ENST00000468602 INTS2Q9H0H0 1204 aaKnown RBP12.1□□□□□ -0.47
MSH5-214ENST00000468602 APOBEC3GQ9HC16 384 aaKnown RBP12.1□□□□□ -0.47
MSH5-214ENST00000468602 APEX2Q9UBZ4 518 aa12.1□□□□□ -0.47
MSH5-214ENST00000468602 PCDHB8Q9UN66 801 aa12.1□□□□□ -0.47
MSH5-214ENST00000468602 YBX2Q9Y2T7 364 aaKnown RBP12.1□□□□□ -0.47
MSH5-214ENST00000468602 VWA8A3KMH1 1905 aa12.09□□□□□ -0.47
MSH5-214ENST00000468602 A0A1W2PQJ5 194 aa12.09□□□□□ -0.47
MSH5-214ENST00000468602 H3BNC9 293 aa12.09□□□□□ -0.47
MSH5-214ENST00000468602 TEX33O43247 280 aa12.09□□□□□ -0.47
MSH5-214ENST00000468602 TBC1D4O60343 1298 aa12.09□□□□□ -0.47
MSH5-214ENST00000468602 LILRB3O75022 631 aa12.09□□□□□ -0.47
MSH5-214ENST00000468602 SOD2P04179 222 aa12.09□□□□□ -0.47
MSH5-214ENST00000468602 CA3P07451 260 aa12.09□□□□□ -0.47
MSH5-214ENST00000468602 SLC9A1P19634 815 aa12.09□□□□□ -0.47
MSH5-214ENST00000468602 WARSP23381 471 aaKnown RBP12.09□□□□□ -0.47
MSH5-214ENST00000468602 PIK3CAP42336 1068 aa12.09□□□□□ -0.47
MSH5-214ENST00000468602 OR1G1P47890 313 aa12.09□□□□□ -0.47
MSH5-214ENST00000468602 MRE11P49959 708 aa12.09□□□□□ -0.47
MSH5-214ENST00000468602 ZNF699Q32M78 642 aa12.09□□□□□ -0.47
MSH5-214ENST00000468602 PAN2Q504Q3 1202 aaKnown RBP12.09□□□□□ -0.47
MSH5-214ENST00000468602 TIGD5Q53EQ6 642 aa12.09□□□□□ -0.47
MSH5-214ENST00000468602 PHLDB3Q6NSJ2 640 aa12.09□□□□□ -0.47
MSH5-214ENST00000468602 FUT10Q6P4F1 479 aa12.09□□□□□ -0.47
MSH5-214ENST00000468602 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.09□□□□□ -0.47
MSH5-214ENST00000468602 UNC93AQ86WB7 457 aa12.09□□□□□ -0.47
MSH5-214ENST00000468602 FMNL3Q8IVF7 1028 aa12.09□□□□□ -0.47
MSH5-214ENST00000468602 VSTM4Q8IW00 320 aa12.09□□□□□ -0.47
MSH5-214ENST00000468602 APPL2Q8NEU8 664 aa12.09□□□□□ -0.47
MSH5-214ENST00000468602 PIK3R5Q8WYR1 880 aa12.09□□□□□ -0.47
MSH5-214ENST00000468602 SENP8Q96LD8 212 aa12.09□□□□□ -0.47
MSH5-214ENST00000468602 NT5C1BQ96P26 610 aa12.09□□□□□ -0.47
MSH5-214ENST00000468602 C11orf84Q9BUA3 381 aaPredicted RBP12.09□□□□□ -0.47
MSH5-214ENST00000468602 HERC2P3Q9BVR0 1158 aa12.09□□□□□ -0.47
MSH5-214ENST00000468602 VN1R3Q9BXE9 311 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms