RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 IGLV2-14P01704 120 aa3.91□□□□□ -1.78
SNX4-202ENST00000465505 FAM163BP0C2L3 166 aa3.91□□□□□ -1.78
SNX4-202ENST00000465505 CT47B1P0C2W7 299 aaPredicted RBP3.91□□□□□ -1.78
SNX4-202ENST00000465505 RAP2AP10114 183 aa3.91□□□□□ -1.78
SNX4-202ENST00000465505 MTHFD2P13995 350 aa3.91□□□□□ -1.78
SNX4-202ENST00000465505 GSPT1P15170 499 aaKnown RBP3.91□□□□□ -1.78
SNX4-202ENST00000465505 ATP5JP18859 108 aa3.91□□□□□ -1.78
SNX4-202ENST00000465505 FPR1P21462 350 aa3.91□□□□□ -1.78
SNX4-202ENST00000465505 FGFR4P22455 802 aa3.91□□□□□ -1.78
SNX4-202ENST00000465505 SLC6A2P23975 617 aa3.91□□□□□ -1.78
SNX4-202ENST00000465505 PER3P56645 1201 aa3.91□□□□□ -1.78
SNX4-202ENST00000465505 SCAND1P57086 179 aa3.91□□□□□ -1.78
SNX4-202ENST00000465505 UBE4AQ14139 1066 aa3.91□□□□□ -1.78
SNX4-202ENST00000465505 KLHL10Q6JEL2 608 aa3.91□□□□□ -1.78
SNX4-202ENST00000465505 RSPH1Q8WYR4 309 aa3.91□□□□□ -1.78
SNX4-202ENST00000465505 RUNDC1Q96C34 613 aa3.91□□□□□ -1.78
SNX4-202ENST00000465505 UHRF1Q96T88 793 aaPredicted RBP3.91□□□□□ -1.78
SNX4-202ENST00000465505 MYOCQ99972 504 aa3.91□□□□□ -1.78
SNX4-202ENST00000465505 SEZ6LQ9BYH1 1024 aa3.91□□□□□ -1.78
SNX4-202ENST00000465505 REXO4Q9GZR2 422 aaKnown RBP3.91□□□□□ -1.78
SNX4-202ENST00000465505 GALNT9Q9HCQ5 603 aa3.91□□□□□ -1.78
SNX4-202ENST00000465505 DMRT3Q9NQL9 472 aa3.91□□□□□ -1.78
SNX4-202ENST00000465505 FBXO34Q9NWN3 711 aa3.91□□□□□ -1.78
SNX4-202ENST00000465505 FOXJ2Q9P0K8 574 aa3.91□□□□□ -1.78
SNX4-202ENST00000465505 TESQ9UGI8 421 aaKnown RBP3.91□□□□□ -1.78
SNX4-202ENST00000465505 ACAD8Q9UKU7 415 aa3.91□□□□□ -1.78
SNX4-202ENST00000465505 AATKQ6ZMQ8 1374 aa3.9□□□□□ -1.78
SNX4-202ENST00000465505 INO80B-WBP1J3KQ70 363 aa3.9□□□□□ -1.79
SNX4-202ENST00000465505 IPO8O15397 1037 aaKnown RBP3.9□□□□□ -1.79
SNX4-202ENST00000465505 PRC1O43663 620 aa3.9□□□□□ -1.79
SNX4-202ENST00000465505 HMMRO75330 724 aa3.9□□□□□ -1.79
SNX4-202ENST00000465505 GPANK1O95872 356 aa3.9□□□□□ -1.79
SNX4-202ENST00000465505 IGHDP01880 384 aa3.9□□□□□ -1.79
SNX4-202ENST00000465505 HSP90AB1P08238 724 aaKnown RBP3.9□□□□□ -1.79
SNX4-202ENST00000465505 CKBP12277 381 aa3.9□□□□□ -1.79
SNX4-202ENST00000465505 MCAMP43121 646 aa3.9□□□□□ -1.79
SNX4-202ENST00000465505 GPR3P46089 330 aa3.9□□□□□ -1.79
SNX4-202ENST00000465505 ALDH1A3P47895 512 aa3.9□□□□□ -1.79
SNX4-202ENST00000465505 SLC6A9P48067 706 aa3.9□□□□□ -1.79
SNX4-202ENST00000465505 HSD11B2P80365 405 aa3.9□□□□□ -1.79
SNX4-202ENST00000465505 MALLQ13021 153 aa3.9□□□□□ -1.79
SNX4-202ENST00000465505 DCTN1Q14203 1278 aa3.9□□□□□ -1.79
SNX4-202ENST00000465505 DHX8Q14562 1220 aaKnown RBP3.9□□□□□ -1.79
SNX4-202ENST00000465505 SEPT2Q15019 361 aa3.9□□□□□ -1.79
SNX4-202ENST00000465505 NOMO1Q15155 1222 aa3.9□□□□□ -1.79
SNX4-202ENST00000465505 CYP2A13Q16696 494 aa3.9□□□□□ -1.79
SNX4-202ENST00000465505 TOR2AQ5JU69 321 aa3.9□□□□□ -1.79
SNX4-202ENST00000465505 CCSAPQ6IQ19 270 aaPredicted RBP3.9□□□□□ -1.79
SNX4-202ENST00000465505 PDILTQ8N807 584 aa3.9□□□□□ -1.79
SNX4-202ENST00000465505 STAG1Q8WVM7 1258 aa3.9□□□□□ -1.79
SNX4-202ENST00000465505 CASKIN2Q8WXE0 1202 aa3.9□□□□□ -1.79
SNX4-202ENST00000465505 RNF31Q96EP0 1072 aa3.9□□□□□ -1.79
SNX4-202ENST00000465505 PDLIM2Q96JY6 352 aa3.9□□□□□ -1.79
SNX4-202ENST00000465505 C8orf48Q96LL4 319 aa3.9□□□□□ -1.79
SNX4-202ENST00000465505 NAP1L4Q99733 375 aaKnown RBP3.9□□□□□ -1.79
SNX4-202ENST00000465505 ARPC5LQ9BPX5 153 aa3.9□□□□□ -1.79
SNX4-202ENST00000465505 PAIP2Q9BPZ3 127 aaKnown RBP3.9□□□□□ -1.79
SNX4-202ENST00000465505 DUSP26Q9BV47 211 aa3.9□□□□□ -1.79
SNX4-202ENST00000465505 ACE2Q9BYF1 805 aaPredicted RBP3.9□□□□□ -1.79
SNX4-202ENST00000465505 SENP6Q9GZR1 1112 aaPredicted RBP3.9□□□□□ -1.79
SNX4-202ENST00000465505 LDAHQ9H6V9 325 aa3.9□□□□□ -1.79
SNX4-202ENST00000465505 LANCL2Q9NS86 450 aa3.9□□□□□ -1.79
SNX4-202ENST00000465505 SEMA4GQ9NTN9 838 aa3.9□□□□□ -1.79
SNX4-202ENST00000465505 TBCCD1Q9NVR7 557 aa3.9□□□□□ -1.79
SNX4-202ENST00000465505 USP25Q9UHP3 1055 aa3.9□□□□□ -1.79
SNX4-202ENST00000465505 KCNE5Q9UJ90 142 aa3.9□□□□□ -1.79
SNX4-202ENST00000465505 COL4A3BPQ9Y5P4 624 aa3.9□□□□□ -1.79
SNX4-202ENST00000465505 ACTL7AQ9Y615 435 aa3.9□□□□□ -1.79
SNX4-202ENST00000465505 ARHGEF17Q96PE2 2063 aaPredicted RBP3.9□□□□□ -1.79
SNX4-202ENST00000465505 MYADML2A6NDP7 307 aa3.89□□□□□ -1.79
SNX4-202ENST00000465505 GOLGA6L3A6NEY3 463 aa3.89□□□□□ -1.79
SNX4-202ENST00000465505 MGST3O14880 152 aa3.89□□□□□ -1.79
SNX4-202ENST00000465505 C1QL1O75973 258 aa3.89□□□□□ -1.79
SNX4-202ENST00000465505 MATN4O95460 622 aa3.89□□□□□ -1.79
SNX4-202ENST00000465505 HSD3B2P26439 372 aa3.89□□□□□ -1.79
SNX4-202ENST00000465505 PCSK1P29120 753 aa3.89□□□□□ -1.79
SNX4-202ENST00000465505 SRSF2Q01130 221 aaKnown RBP3.89□□□□□ -1.79
SNX4-202ENST00000465505 NHLH1Q02575 133 aa3.89□□□□□ -1.79
SNX4-202ENST00000465505 IFT88Q13099 833 aa3.89□□□□□ -1.79
SNX4-202ENST00000465505 KCTD2Q14681 263 aa3.89□□□□□ -1.79
SNX4-202ENST00000465505 ZNF529Q6P280 563 aa3.89□□□□□ -1.79
SNX4-202ENST00000465505 SEM1Q6ZVN7 128 aa3.89□□□□□ -1.79
SNX4-202ENST00000465505 TTC30BQ8N4P2 665 aa3.89□□□□□ -1.79
SNX4-202ENST00000465505 NGEFQ8N5V2 710 aa3.89□□□□□ -1.79
SNX4-202ENST00000465505 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.89□□□□□ -1.79
SNX4-202ENST00000465505 MARS2Q96GW9 593 aaKnown RBP3.89□□□□□ -1.79
SNX4-202ENST00000465505 TMX4Q9H1E5 349 aaPredicted RBP3.89□□□□□ -1.79
SNX4-202ENST00000465505 CAAP1Q9H8G2 361 aa3.89□□□□□ -1.79
SNX4-202ENST00000465505 UNKLQ9H9P5 680 aaKnown RBP3.89□□□□□ -1.79
SNX4-202ENST00000465505 PCDH12Q9NPG4 1184 aa3.89□□□□□ -1.79
SNX4-202ENST00000465505 ZNF69Q9UC07 566 aa3.89□□□□□ -1.79
SNX4-202ENST00000465505 SUN2Q9UH99 717 aa3.89□□□□□ -1.79
SNX4-202ENST00000465505 AJAP1Q9UKB5 411 aaPredicted RBP3.89□□□□□ -1.79
SNX4-202ENST00000465505 NOL7Q9UMY1 257 aaKnown RBP3.89□□□□□ -1.79
SNX4-202ENST00000465505 IFRD1O00458 451 aaPredicted RBP3.88□□□□□ -1.79
SNX4-202ENST00000465505 KIF1CO43896 1103 aaKnown RBP3.88□□□□□ -1.79
SNX4-202ENST00000465505 BRINP1O60477 761 aa3.88□□□□□ -1.79
SNX4-202ENST00000465505 MTA2O94776 668 aa3.88□□□□□ -1.79
SNX4-202ENST00000465505 ENDOD1O94919 500 aa3.88□□□□□ -1.79
SNX4-202ENST00000465505 C1RP00736 705 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms