RNA–Protein interactions for RNA: ENST00000463685.1

ABCF3-204, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-204ENST00000463685 GDF15Q99988 308 aa16.1■□□□□ 0.17
ABCF3-204ENST00000463685 TTYH3Q9C0H2 523 aa16.1■□□□□ 0.17
ABCF3-204ENST00000463685 MTIF3Q9H2K0 278 aaKnown RBP16.1■□□□□ 0.17
ABCF3-204ENST00000463685 SMYD3Q9H7B4 428 aa16.1■□□□□ 0.17
ABCF3-204ENST00000463685 DNAJC12Q9UKB3 198 aa16.1■□□□□ 0.17
ABCF3-204ENST00000463685 LAMA2P24043 3122 aaKnown RBP16.09■□□□□ 0.17
ABCF3-204ENST00000463685 LCHNA4D1U4 455 aa16.09■□□□□ 0.17
ABCF3-204ENST00000463685 NRP1O14786 923 aa16.09■□□□□ 0.17
ABCF3-204ENST00000463685 B3GAT3O94766 335 aa16.09■□□□□ 0.17
ABCF3-204ENST00000463685 PNMA6AP0CW24 399 aaPredicted RBP16.09■□□□□ 0.17
ABCF3-204ENST00000463685 UCHL3P15374 230 aa16.09■□□□□ 0.17
ABCF3-204ENST00000463685 BRCC3P46736 316 aa16.09■□□□□ 0.17
ABCF3-204ENST00000463685 TAF6P49848 677 aa16.09■□□□□ 0.17
ABCF3-204ENST00000463685 FXR1P51114 621 aaKnown RBP eCLIP16.09■□□□□ 0.17
ABCF3-204ENST00000463685 BCAR1P56945 870 aa16.09■□□□□ 0.17
ABCF3-204ENST00000463685 LILRA4P59901 499 aa16.09■□□□□ 0.17
ABCF3-204ENST00000463685 HTRA4P83105 476 aaPredicted RBP16.09■□□□□ 0.17
ABCF3-204ENST00000463685 MYO1EQ12965 1108 aa16.09■□□□□ 0.17
ABCF3-204ENST00000463685 RAPGEF1Q13905 1077 aa16.09■□□□□ 0.17
ABCF3-204ENST00000463685 WDR72Q3MJ13 1102 aa16.09■□□□□ 0.17
ABCF3-204ENST00000463685 ZNF667Q5HYK9 610 aa16.09■□□□□ 0.17
ABCF3-204ENST00000463685 DCLRE1AQ6PJP8 1040 aa16.09■□□□□ 0.17
ABCF3-204ENST00000463685 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.09■□□□□ 0.17
ABCF3-204ENST00000463685 PHOSPHO2Q8TCD6 241 aa16.09■□□□□ 0.17
ABCF3-204ENST00000463685 BCL7CQ8WUZ0 217 aaPredicted RBP16.09■□□□□ 0.17
ABCF3-204ENST00000463685 DDX27Q96GQ7 796 aaKnown RBP16.09■□□□□ 0.17
ABCF3-204ENST00000463685 ZNF560Q96MR9 790 aa16.09■□□□□ 0.17
ABCF3-204ENST00000463685 UROC1Q96N76 676 aa16.09■□□□□ 0.17
ABCF3-204ENST00000463685 NAA15Q9BXJ9 866 aaKnown RBP16.09■□□□□ 0.17
ABCF3-204ENST00000463685 NIF3L1Q9GZT8 377 aa16.09■□□□□ 0.17
ABCF3-204ENST00000463685 SDCBP2Q9H190 292 aa16.09■□□□□ 0.17
ABCF3-204ENST00000463685 SNX9Q9Y5X1 595 aa16.09■□□□□ 0.17
ABCF3-204ENST00000463685 TLL1O43897 1013 aa16.08■□□□□ 0.16
ABCF3-204ENST00000463685 GALTP07902 379 aa16.08■□□□□ 0.16
ABCF3-204ENST00000463685 WEE2P0C1S8 567 aa16.08■□□□□ 0.16
ABCF3-204ENST00000463685 MYOGP15173 224 aa16.08■□□□□ 0.16
ABCF3-204ENST00000463685 CASP14P31944 242 aa16.08■□□□□ 0.16
ABCF3-204ENST00000463685 ASPAP45381 313 aa16.08■□□□□ 0.16
ABCF3-204ENST00000463685 CDH8P55286 799 aa16.08■□□□□ 0.16
ABCF3-204ENST00000463685 CUL2Q13617 745 aa16.08■□□□□ 0.16
ABCF3-204ENST00000463685 SV2CQ496J9 727 aa16.08■□□□□ 0.16
ABCF3-204ENST00000463685 PPFIBP1Q86W92 1011 aa16.08■□□□□ 0.16
ABCF3-204ENST00000463685 TMEM173Q86WV6 379 aaPredicted RBP16.08■□□□□ 0.16
ABCF3-204ENST00000463685 TAF4BQ92750 862 aa16.08■□□□□ 0.16
ABCF3-204ENST00000463685 RAD9AQ99638 391 aa16.08■□□□□ 0.16
ABCF3-204ENST00000463685 VRTNQ9H8Y1 702 aa16.08■□□□□ 0.16
ABCF3-204ENST00000463685 MARCH5Q9NX47 278 aa16.08■□□□□ 0.16
ABCF3-204ENST00000463685 CEP72Q9P209 647 aa16.08■□□□□ 0.16
ABCF3-204ENST00000463685 FAN1Q9Y2M0 1017 aa16.08■□□□□ 0.16
ABCF3-204ENST00000463685 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.08■□□□□ 0.16
ABCF3-204ENST00000463685 KPNA7A9QM74 516 aa16.07■□□□□ 0.16
ABCF3-204ENST00000463685 CYB561D2O14569 222 aa16.07■□□□□ 0.16
ABCF3-204ENST00000463685 STAU1O95793 577 aaKnown RBP16.07■□□□□ 0.16
ABCF3-204ENST00000463685 ALDH2P05091 517 aa16.07■□□□□ 0.16
ABCF3-204ENST00000463685 PNPLA4P41247 253 aa16.07■□□□□ 0.16
ABCF3-204ENST00000463685 TNNC1P63316 161 aa16.07■□□□□ 0.16
ABCF3-204ENST00000463685 ARID5BQ14865 1188 aa16.07■□□□□ 0.16
ABCF3-204ENST00000463685 DRAP1Q14919 205 aaPredicted RBP16.07■□□□□ 0.16
ABCF3-204ENST00000463685 TIGD5Q53EQ6 642 aa16.07■□□□□ 0.16
ABCF3-204ENST00000463685 CACNA2D4Q7Z3S7 1137 aa16.07■□□□□ 0.16
ABCF3-204ENST00000463685 FIBCD1Q8N539 461 aa16.07■□□□□ 0.16
ABCF3-204ENST00000463685 BAP1Q92560 729 aa16.07■□□□□ 0.16
ABCF3-204ENST00000463685 SENP8Q96LD8 212 aa16.07■□□□□ 0.16
ABCF3-204ENST00000463685 MMS19Q96T76 1030 aa16.07■□□□□ 0.16
ABCF3-204ENST00000463685 TMEM175Q9BSA9 504 aa16.07■□□□□ 0.16
ABCF3-204ENST00000463685 NUP58Q9BVL2 599 aa16.07■□□□□ 0.16
ABCF3-204ENST00000463685 GPR88Q9GZN0 384 aa16.07■□□□□ 0.16
ABCF3-204ENST00000463685 INSL6Q9Y581 213 aa16.07■□□□□ 0.16
ABCF3-204ENST00000463685 TIMM13Q9Y5L4 95 aaPredicted RBP16.07■□□□□ 0.16
ABCF3-204ENST00000463685 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.07■□□□□ 0.16
ABCF3-204ENST00000463685 TADA2AO75478 443 aa16.06■□□□□ 0.16
ABCF3-204ENST00000463685 ARHGEF15O94989 841 aa16.06■□□□□ 0.16
ABCF3-204ENST00000463685 CALCAP01258 141 aa16.06■□□□□ 0.16
ABCF3-204ENST00000463685 CD58P19256 250 aa16.06■□□□□ 0.16
ABCF3-204ENST00000463685 ADKP55263 362 aaKnown RBP16.06■□□□□ 0.16
ABCF3-204ENST00000463685 GCNT1Q02742 428 aa16.06■□□□□ 0.16
ABCF3-204ENST00000463685 FIGNQ5HY92 759 aa16.06■□□□□ 0.16
ABCF3-204ENST00000463685 PDXDC1Q6P996 788 aa16.06■□□□□ 0.16
ABCF3-204ENST00000463685 DSTYKQ6XUX3 929 aa16.06■□□□□ 0.16
ABCF3-204ENST00000463685 COLGALT1Q8NBJ5 622 aa16.06■□□□□ 0.16
ABCF3-204ENST00000463685 RSPH1Q8WYR4 309 aa16.06■□□□□ 0.16
ABCF3-204ENST00000463685 PDLIM2Q96JY6 352 aa16.06■□□□□ 0.16
ABCF3-204ENST00000463685 MRPL45Q9BRJ2 306 aaKnown RBP16.06■□□□□ 0.16
ABCF3-204ENST00000463685 COLEC11Q9BWP8 271 aa16.06■□□□□ 0.16
ABCF3-204ENST00000463685 GDAP2Q9NXN4 497 aa16.06■□□□□ 0.16
ABCF3-204ENST00000463685 CAPN11Q9UMQ6 739 aa16.06■□□□□ 0.16
ABCF3-204ENST00000463685 L1RE1Q9UN81 338 aa16.06■□□□□ 0.16
ABCF3-204ENST00000463685 PDE4DIPQ5VU43 2346 aa16.05■□□□□ 0.16
ABCF3-204ENST00000463685 A0A1W2PQJ5 194 aa16.05■□□□□ 0.16
ABCF3-204ENST00000463685 FOXN3O00409 490 aaPredicted RBP16.05■□□□□ 0.16
ABCF3-204ENST00000463685 HCRTO43612 131 aa16.05■□□□□ 0.16
ABCF3-204ENST00000463685 MFAP3LO75121 409 aa16.05■□□□□ 0.16
ABCF3-204ENST00000463685 P4HA1P13674 534 aa16.05■□□□□ 0.16
ABCF3-204ENST00000463685 ACO1P21399 889 aaKnown RBP16.05■□□□□ 0.16
ABCF3-204ENST00000463685 KRT9P35527 623 aa16.05■□□□□ 0.16
ABCF3-204ENST00000463685 USP8P40818 1118 aa16.05■□□□□ 0.16
ABCF3-204ENST00000463685 ALDH7A1P49419 539 aaKnown RBP16.05■□□□□ 0.16
ABCF3-204ENST00000463685 AARSP49588 968 aaKnown RBP eCLIP16.05■□□□□ 0.16
ABCF3-204ENST00000463685 MFAP3P55082 362 aa16.05■□□□□ 0.16
ABCF3-204ENST00000463685 JAM2P57087 298 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms