RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 PRMT8Q9NR22 394 aaPredicted RBP25.29■■□□□ 1.64
SSNA1-203ENST00000463511 CEP72Q9P209 647 aa25.29■■□□□ 1.64
SSNA1-203ENST00000463511 AFF4Q9UHB7 1163 aaKnown RBP25.29■■□□□ 1.64
SSNA1-203ENST00000463511 NUP210Q8TEM1 1887 aaPredicted RBP25.29■■□□□ 1.64
SSNA1-203ENST00000463511 KIF26AQ9ULI4 1882 aaPredicted RBP25.28■■□□□ 1.64
SSNA1-203ENST00000463511 LAD1O00515 517 aa25.28■■□□□ 1.64
SSNA1-203ENST00000463511 TOM1L1O75674 476 aa25.28■■□□□ 1.64
SSNA1-203ENST00000463511 MICAL2O94851 1124 aa25.28■■□□□ 1.64
SSNA1-203ENST00000463511 GUCY2CP25092 1073 aa25.28■■□□□ 1.64
SSNA1-203ENST00000463511 PRPHP41219 470 aa25.28■■□□□ 1.64
SSNA1-203ENST00000463511 IQCEQ6IPM2 695 aa25.28■■□□□ 1.64
SSNA1-203ENST00000463511 VITQ6UXI7 678 aa25.28■■□□□ 1.64
SSNA1-203ENST00000463511 DTHD1Q6ZMT9 781 aa25.28■■□□□ 1.64
SSNA1-203ENST00000463511 APPL2Q8NEU8 664 aa25.28■■□□□ 1.64
SSNA1-203ENST00000463511 NELL1Q92832 810 aa25.28■■□□□ 1.64
SSNA1-203ENST00000463511 ZNF512Q96ME7 567 aaPredicted RBP25.28■■□□□ 1.64
SSNA1-203ENST00000463511 TIPINQ9BVW5 301 aa25.28■■□□□ 1.64
SSNA1-203ENST00000463511 DLL3Q9NYJ7 618 aa25.28■■□□□ 1.64
SSNA1-203ENST00000463511 SMG5Q9UPR3 1016 aaKnown RBP25.28■■□□□ 1.64
SSNA1-203ENST00000463511 CXCL8P10145 99 aa25.27■■□□□ 1.64
SSNA1-203ENST00000463511 MYL4P12829 197 aa25.27■■□□□ 1.64
SSNA1-203ENST00000463511 GJA1P17302 382 aa25.27■■□□□ 1.64
SSNA1-203ENST00000463511 GDI1P31150 447 aa25.27■■□□□ 1.64
SSNA1-203ENST00000463511 ATP2C1P98194 919 aaPredicted RBP25.27■■□□□ 1.64
SSNA1-203ENST00000463511 RSPO4Q2I0M5 234 aaPredicted RBP25.27■■□□□ 1.64
SSNA1-203ENST00000463511 RNF19BQ6ZMZ0 732 aa25.27■■□□□ 1.64
SSNA1-203ENST00000463511 TMEM161BQ8NDZ6 487 aa25.27■■□□□ 1.64
SSNA1-203ENST00000463511 SPIRE2Q8WWL2 714 aa25.27■■□□□ 1.64
SSNA1-203ENST00000463511 SMARCD2Q92925 531 aa25.27■■□□□ 1.64
SSNA1-203ENST00000463511 NTPCRQ9BSD7 190 aaKnown RBP25.27■■□□□ 1.64
SSNA1-203ENST00000463511 PCDHB8Q9UN66 801 aa25.27■■□□□ 1.64
SSNA1-203ENST00000463511 CLIC4Q9Y696 253 aa25.27■■□□□ 1.64
SSNA1-203ENST00000463511 NCOR2Q9Y618 2525 aa25.27■■□□□ 1.64
SSNA1-203ENST00000463511 LILRB5O75023 590 aa25.26■■□□□ 1.63
SSNA1-203ENST00000463511 MOSPD3O75425 235 aa25.26■■□□□ 1.63
SSNA1-203ENST00000463511 MAPTP10636 758 aaKnown RBP25.26■■□□□ 1.63
SSNA1-203ENST00000463511 PLS3P13797 630 aa25.26■■□□□ 1.63
SSNA1-203ENST00000463511 PSMC3P17980 439 aa25.26■■□□□ 1.63
SSNA1-203ENST00000463511 VIPR2P41587 438 aa25.26■■□□□ 1.63
SSNA1-203ENST00000463511 SPAG1Q07617 926 aa25.26■■□□□ 1.63
SSNA1-203ENST00000463511 SF3A1Q15459 793 aaKnown RBP25.26■■□□□ 1.63
SSNA1-203ENST00000463511 ZNF687Q8N1G0 1237 aa25.26■■□□□ 1.63
SSNA1-203ENST00000463511 IRF7Q92985 503 aa25.26■■□□□ 1.63
SSNA1-203ENST00000463511 EPC1Q9H2F5 836 aa25.26■■□□□ 1.63
SSNA1-203ENST00000463511 ZNF334Q9HCZ1 680 aaPredicted RBP25.26■■□□□ 1.63
SSNA1-203ENST00000463511 ASAH2Q9NR71 780 aa25.26■■□□□ 1.63
SSNA1-203ENST00000463511 NCANO14594 1321 aa25.26■■□□□ 1.63
SSNA1-203ENST00000463511 RALGAPA1Q6GYQ0 2036 aa25.25■■□□□ 1.63
SSNA1-203ENST00000463511 MAN2B1O00754 1011 aa25.25■■□□□ 1.63
SSNA1-203ENST00000463511 MARCKSP29966 332 aaPredicted RBP25.25■■□□□ 1.63
SSNA1-203ENST00000463511 MATR3P43243 847 aaKnown RBP eCLIP25.25■■□□□ 1.63
SSNA1-203ENST00000463511 SMTNP53814 917 aa25.25■■□□□ 1.63
SSNA1-203ENST00000463511 ZPBP2Q6X784 338 aa25.25■■□□□ 1.63
SSNA1-203ENST00000463511 MAP4K3Q8IVH8 894 aa25.25■■□□□ 1.63
SSNA1-203ENST00000463511 ZSCAN18Q8TBC5 510 aaPredicted RBP25.25■■□□□ 1.63
SSNA1-203ENST00000463511 USP28Q96RU2 1077 aa25.25■■□□□ 1.63
SSNA1-203ENST00000463511 PLIN2Q99541 437 aa25.25■■□□□ 1.63
SSNA1-203ENST00000463511 HAPLN2Q9GZV7 340 aa25.25■■□□□ 1.63
SSNA1-203ENST00000463511 MAFFQ9ULX9 164 aa25.25■■□□□ 1.63
SSNA1-203ENST00000463511 YIPF1Q9Y548 306 aa25.25■■□□□ 1.63
SSNA1-203ENST00000463511 TIMM13Q9Y5L4 95 aaPredicted RBP25.25■■□□□ 1.63
SSNA1-203ENST00000463511 CLDN3O15551 220 aa25.24■■□□□ 1.63
SSNA1-203ENST00000463511 EPHA5P54756 1037 aa25.24■■□□□ 1.63
SSNA1-203ENST00000463511 YWHAHQ04917 246 aaPredicted RBP25.24■■□□□ 1.63
SSNA1-203ENST00000463511 MCL1Q07820 350 aa25.24■■□□□ 1.63
SSNA1-203ENST00000463511 PTPAQ15257 358 aa25.24■■□□□ 1.63
SSNA1-203ENST00000463511 TEAD2Q15562 447 aa25.24■■□□□ 1.63
SSNA1-203ENST00000463511 LEMD2Q8NC56 503 aa25.24■■□□□ 1.63
SSNA1-203ENST00000463511 SECISBP2LQ93073 1101 aaKnown RBP25.24■■□□□ 1.63
SSNA1-203ENST00000463511 PGLYRP2Q96PD5 576 aa25.24■■□□□ 1.63
SSNA1-203ENST00000463511 PNMA5Q96PV4 448 aa25.24■■□□□ 1.63
SSNA1-203ENST00000463511 CHRDQ9H2X0 955 aa25.24■■□□□ 1.63
SSNA1-203ENST00000463511 SLITRK6Q9H5Y7 841 aa25.24■■□□□ 1.63
SSNA1-203ENST00000463511 PIAS3Q9Y6X2 628 aa25.24■■□□□ 1.63
SSNA1-203ENST00000463511 M0QZQ0 153 aa25.23■■□□□ 1.63
SSNA1-203ENST00000463511 VNN2O95498 520 aa25.23■■□□□ 1.63
SSNA1-203ENST00000463511 BMP15O95972 392 aa25.23■■□□□ 1.63
SSNA1-203ENST00000463511 OR4Q2P0C623 313 aa25.23■■□□□ 1.63
SSNA1-203ENST00000463511 CACNB1Q02641 598 aaPredicted RBP25.23■■□□□ 1.63
SSNA1-203ENST00000463511 HYIQ5T013 277 aa25.23■■□□□ 1.63
SSNA1-203ENST00000463511 SYT2Q8N9I0 419 aaPredicted RBP25.23■■□□□ 1.63
SSNA1-203ENST00000463511 SHKBP1Q8TBC3 707 aa25.23■■□□□ 1.63
SSNA1-203ENST00000463511 DEPDC1BQ8WUY9 529 aa25.23■■□□□ 1.63
SSNA1-203ENST00000463511 FAM3CQ92520 227 aa25.23■■□□□ 1.63
SSNA1-203ENST00000463511 KIF12Q96FN5 646 aa25.23■■□□□ 1.63
SSNA1-203ENST00000463511 BICD1Q96G01 975 aa25.23■■□□□ 1.63
SSNA1-203ENST00000463511 ZNF396Q96N95 335 aaPredicted RBP25.23■■□□□ 1.63
SSNA1-203ENST00000463511 TFIP11Q9UBB9 837 aaKnown RBP25.23■■□□□ 1.63
SSNA1-203ENST00000463511 NPHP3-ACAD11A0A0J9YXS1 232 aa25.22■■□□□ 1.63
SSNA1-203ENST00000463511 TTC26A0AVF1 554 aa25.22■■□□□ 1.63
SSNA1-203ENST00000463511 TNFSF9P41273 254 aa25.22■■□□□ 1.63
SSNA1-203ENST00000463511 SLC12A3P55017 1021 aa25.22■■□□□ 1.63
SSNA1-203ENST00000463511 CEBPZQ03701 1054 aaKnown RBP25.22■■□□□ 1.63
SSNA1-203ENST00000463511 FOXD4L6Q3SYB3 417 aaPredicted RBP25.22■■□□□ 1.63
SSNA1-203ENST00000463511 FOXD4L3Q6VB84 417 aaPredicted RBP25.22■■□□□ 1.63
SSNA1-203ENST00000463511 BEST2Q8NFU1 509 aa25.22■■□□□ 1.63
SSNA1-203ENST00000463511 FAM126AQ9BYI3 521 aaPredicted RBP25.22■■□□□ 1.63
SSNA1-203ENST00000463511 CRISPLD1Q9H336 500 aa25.22■■□□□ 1.63
SSNA1-203ENST00000463511 PLEKHA5Q9HAU0 1116 aa25.22■■□□□ 1.63
SSNA1-203ENST00000463511 TRPV5Q9NQA5 729 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms