RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 ANKRD36BP1Q96IX9 119 aa13.68□□□□□ -0.22
VAPB-203ENST00000463370 UVRAGQ9P2Y5 699 aa13.68□□□□□ -0.22
VAPB-203ENST00000463370 AMACRQ9UHK6 382 aa13.68□□□□□ -0.22
VAPB-203ENST00000463370 ANAPC7Q9UJX3 599 aa13.68□□□□□ -0.22
VAPB-203ENST00000463370 TTC7AQ9ULT0 858 aaPredicted RBP13.68□□□□□ -0.22
VAPB-203ENST00000463370 NFU1Q9UMS0 254 aa13.68□□□□□ -0.22
VAPB-203ENST00000463370 POLR3GO15318 223 aaPredicted RBP13.67□□□□□ -0.22
VAPB-203ENST00000463370 F2P00734 622 aa13.67□□□□□ -0.22
VAPB-203ENST00000463370 TNNC2P02585 160 aa13.67□□□□□ -0.22
VAPB-203ENST00000463370 FAM153BP0C7A2 387 aa13.67□□□□□ -0.22
VAPB-203ENST00000463370 PYGMP11217 842 aa13.67□□□□□ -0.22
VAPB-203ENST00000463370 HOXD11P31277 338 aaPredicted RBP13.67□□□□□ -0.22
VAPB-203ENST00000463370 ZNF200P98182 395 aaPredicted RBP13.67□□□□□ -0.22
VAPB-203ENST00000463370 PTP4A2Q12974 167 aa13.67□□□□□ -0.22
VAPB-203ENST00000463370 ORC1Q13415 861 aa13.67□□□□□ -0.22
VAPB-203ENST00000463370 FAM153CQ494X1 144 aa13.67□□□□□ -0.22
VAPB-203ENST00000463370 MAP9Q49MG5 647 aa13.67□□□□□ -0.22
VAPB-203ENST00000463370 RGMBQ6NW40 437 aa13.67□□□□□ -0.22
VAPB-203ENST00000463370 MMS22LQ6ZRQ5 1243 aa13.67□□□□□ -0.22
VAPB-203ENST00000463370 SND1Q7KZF4 910 aaKnown RBP eCLIP13.67□□□□□ -0.22
VAPB-203ENST00000463370 MSL3Q8N5Y2 521 aaKnown RBP13.67□□□□□ -0.22
VAPB-203ENST00000463370 CALR3Q96L12 384 aaKnown RBP13.67□□□□□ -0.22
VAPB-203ENST00000463370 RPS6KC1Q96S38 1066 aa13.67□□□□□ -0.22
VAPB-203ENST00000463370 CELF4Q9BZC1 486 aaKnown RBP13.67□□□□□ -0.22
VAPB-203ENST00000463370 SDCBP2Q9H190 292 aa13.67□□□□□ -0.22
VAPB-203ENST00000463370 ADAMTS10Q9H324 1103 aa13.67□□□□□ -0.22
VAPB-203ENST00000463370 SLC5A4Q9NY91 659 aa13.67□□□□□ -0.22
VAPB-203ENST00000463370 FAM153AQ9UHL3 310 aa13.67□□□□□ -0.22
VAPB-203ENST00000463370 GJD2Q9UKL4 321 aa13.67□□□□□ -0.22
VAPB-203ENST00000463370 HPCAL4Q9UM19 191 aa13.67□□□□□ -0.22
VAPB-203ENST00000463370 A0A1B0GUA9 196 aa13.67□□□□□ -0.22
VAPB-203ENST00000463370 TCRBV7S2A1N4TA0A589 114 aa13.67□□□□□ -0.22
VAPB-203ENST00000463370 SPOPO43791 374 aa13.67□□□□□ -0.22
VAPB-203ENST00000463370 ITGB3P05106 788 aa13.67□□□□□ -0.22
VAPB-203ENST00000463370 LLGL1Q15334 1064 aa13.67□□□□□ -0.22
VAPB-203ENST00000463370 O00370 1275 aa13.66□□□□□ -0.22
VAPB-203ENST00000463370 GPR32O75388 356 aa13.66□□□□□ -0.22
VAPB-203ENST00000463370 IL18RAPO95256 599 aa13.66□□□□□ -0.22
VAPB-203ENST00000463370 HOXA11P31270 313 aaPredicted RBP13.66□□□□□ -0.22
VAPB-203ENST00000463370 GYS2P54840 703 aa13.66□□□□□ -0.22
VAPB-203ENST00000463370 CRHR2Q13324 411 aa13.66□□□□□ -0.22
VAPB-203ENST00000463370 WDR72Q3MJ13 1102 aa13.66□□□□□ -0.22
VAPB-203ENST00000463370 DDX42Q86XP3 938 aaKnown RBP eCLIP13.66□□□□□ -0.22
VAPB-203ENST00000463370 RUBCNQ92622 972 aa13.66□□□□□ -0.22
VAPB-203ENST00000463370 OSMRQ99650 979 aa13.66□□□□□ -0.22
VAPB-203ENST00000463370 RNF19AQ9NV58 838 aa13.66□□□□□ -0.22
VAPB-203ENST00000463370 ADAM22Q9P0K1 906 aa13.66□□□□□ -0.22
VAPB-203ENST00000463370 HMGXB4Q9UGU5 601 aa13.66□□□□□ -0.22
VAPB-203ENST00000463370 DOCK3Q8IZD9 2030 aa13.66□□□□□ -0.22
VAPB-203ENST00000463370 MIF4GDA9UHW6 222 aaKnown RBP13.66□□□□□ -0.22
VAPB-203ENST00000463370 TTI1O43156 1089 aa13.66□□□□□ -0.22
VAPB-203ENST00000463370 ERLIN2O94905 339 aa13.66□□□□□ -0.22
VAPB-203ENST00000463370 TNFRSF8P28908 595 aa13.66□□□□□ -0.22
VAPB-203ENST00000463370 CTNNA1P35221 906 aaKnown RBP13.66□□□□□ -0.22
VAPB-203ENST00000463370 POU5F1Q01860 360 aaKnown RBP13.66□□□□□ -0.22
VAPB-203ENST00000463370 IFT20Q8IY31 132 aa13.66□□□□□ -0.22
VAPB-203ENST00000463370 UBL4BQ8N7F7 174 aa13.66□□□□□ -0.22
VAPB-203ENST00000463370 TSEN2Q8NCE0 465 aaKnown RBP13.66□□□□□ -0.22
VAPB-203ENST00000463370 C1orf131Q8NDD1 294 aaKnown RBP13.66□□□□□ -0.22
VAPB-203ENST00000463370 SMYD3Q9H7B4 428 aa13.66□□□□□ -0.22
VAPB-203ENST00000463370 AVENQ9NQS1 362 aaPredicted RBP13.66□□□□□ -0.22
VAPB-203ENST00000463370 ZNF236Q9UL36 1845 aa13.65□□□□□ -0.22
VAPB-203ENST00000463370 FAM155AB1AL88 458 aaPredicted RBP13.65□□□□□ -0.22
VAPB-203ENST00000463370 SLC10A3P09131 477 aa13.65□□□□□ -0.22
VAPB-203ENST00000463370 ECHS1P30084 290 aa13.65□□□□□ -0.22
VAPB-203ENST00000463370 MAMLD1Q13495 774 aa13.65□□□□□ -0.22
VAPB-203ENST00000463370 MFSD10Q14728 455 aa13.65□□□□□ -0.22
VAPB-203ENST00000463370 WDTC1Q8N5D0 677 aa13.65□□□□□ -0.22
VAPB-203ENST00000463370 RIN2Q8WYP3 895 aaPredicted RBP13.65□□□□□ -0.22
VAPB-203ENST00000463370 TWNKQ96RR1 684 aa13.65□□□□□ -0.22
VAPB-203ENST00000463370 EIF2AQ9BY44 585 aaKnown RBP13.65□□□□□ -0.22
VAPB-203ENST00000463370 WNT8AQ9H1J5 351 aa13.65□□□□□ -0.22
VAPB-203ENST00000463370 PCDHA3Q9Y5H8 950 aa13.65□□□□□ -0.22
VAPB-203ENST00000463370 A0A0U1RQG5 324 aaPredicted RBP13.65□□□□□ -0.22
VAPB-203ENST00000463370 CCDC188H7C350 402 aa13.65□□□□□ -0.22
VAPB-203ENST00000463370 IGHA2P01877 340 aa13.65□□□□□ -0.22
VAPB-203ENST00000463370 POLR2BP30876 1174 aaKnown RBP13.65□□□□□ -0.22
VAPB-203ENST00000463370 TRIM72Q6ZMU5 477 aa13.65□□□□□ -0.22
VAPB-203ENST00000463370 ZNF410Q86VK4 478 aa13.65□□□□□ -0.22
VAPB-203ENST00000463370 PHF13Q86YI8 300 aaPredicted RBP13.65□□□□□ -0.22
VAPB-203ENST00000463370 TMEM40Q8WWA1 233 aa13.65□□□□□ -0.22
VAPB-203ENST00000463370 HES2Q9Y543 173 aa13.65□□□□□ -0.22
VAPB-203ENST00000463370 NRCAMQ92823 1304 aa13.64□□□□□ -0.23
VAPB-203ENST00000463370 MBLAC1A4D2B0 266 aaPredicted RBP13.64□□□□□ -0.23
VAPB-203ENST00000463370 RRN3P2A6NIE6 340 aa13.64□□□□□ -0.23
VAPB-203ENST00000463370 BHMG1C9JSJ3 638 aaPredicted RBP13.64□□□□□ -0.23
VAPB-203ENST00000463370 AGPSO00116 658 aa13.64□□□□□ -0.23
VAPB-203ENST00000463370 TREHO43280 583 aa13.64□□□□□ -0.23
VAPB-203ENST00000463370 NPTXRO95502 500 aa13.64□□□□□ -0.23
VAPB-203ENST00000463370 MYL3P08590 195 aa13.64□□□□□ -0.23
VAPB-203ENST00000463370 MYBL1P10243 752 aa13.64□□□□□ -0.23
VAPB-203ENST00000463370 CYP2C9P11712 490 aa13.64□□□□□ -0.23
VAPB-203ENST00000463370 CTNNA2P26232 953 aa13.64□□□□□ -0.23
VAPB-203ENST00000463370 EPHB4P54760 987 aa13.64□□□□□ -0.23
VAPB-203ENST00000463370 WHAMMQ8TF30 809 aa13.64□□□□□ -0.23
VAPB-203ENST00000463370 DNAJB3Q8WWF6 145 aa13.64□□□□□ -0.23
VAPB-203ENST00000463370 BCO2Q9BYV7 579 aa13.64□□□□□ -0.23
VAPB-203ENST00000463370 ARHGAP39Q9C0H5 1083 aa13.64□□□□□ -0.23
VAPB-203ENST00000463370 NEUROG2Q9H2A3 272 aa13.64□□□□□ -0.23
VAPB-203ENST00000463370 MYADML2A6NDP7 307 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms