RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 FERMT2Q96AC1 680 aa5.21□□□□□ -1.58
USH2A-203ENST00000463147 QRSL1Q9H0R6 528 aaKnown RBP5.21□□□□□ -1.58
USH2A-203ENST00000463147 NMRK2Q9NPI5 230 aa5.21□□□□□ -1.58
USH2A-203ENST00000463147 MAN1C1Q9NR34 630 aa5.21□□□□□ -1.58
USH2A-203ENST00000463147 FNIP2Q9P278 1114 aa5.21□□□□□ -1.58
USH2A-203ENST00000463147 SLC17A6Q9P2U8 582 aa5.21□□□□□ -1.58
USH2A-203ENST00000463147 TMPRSS11EQ9UL52 423 aa5.21□□□□□ -1.58
USH2A-203ENST00000463147 PHTF1Q9UMS5 762 aa5.21□□□□□ -1.58
USH2A-203ENST00000463147 PPP2R3BQ9Y5P8 575 aa5.21□□□□□ -1.58
USH2A-203ENST00000463147 GPR45Q9Y5Y3 372 aa5.21□□□□□ -1.58
USH2A-203ENST00000463147 PRSS38A1L453 326 aa5.2□□□□□ -1.58
USH2A-203ENST00000463147 GASTP01350 101 aa5.2□□□□□ -1.58
USH2A-203ENST00000463147 CFIP05156 583 aa5.2□□□□□ -1.58
USH2A-203ENST00000463147 HSPA6P17066 643 aa5.2□□□□□ -1.58
USH2A-203ENST00000463147 VCAM1P19320 739 aa5.2□□□□□ -1.58
USH2A-203ENST00000463147 ENPP1P22413 925 aa5.2□□□□□ -1.58
USH2A-203ENST00000463147 ABCG1P45844 678 aa5.2□□□□□ -1.58
USH2A-203ENST00000463147 PICALMQ13492 652 aa5.2□□□□□ -1.58
USH2A-203ENST00000463147 LLGL1Q15334 1064 aa5.2□□□□□ -1.58
USH2A-203ENST00000463147 FSCN1Q16658 493 aaKnown RBP5.2□□□□□ -1.58
USH2A-203ENST00000463147 BMT2Q1RMZ1 405 aa5.2□□□□□ -1.58
USH2A-203ENST00000463147 PITRM1Q5JRX3 1037 aa5.2□□□□□ -1.58
USH2A-203ENST00000463147 FAM83BQ5T0W9 1011 aa5.2□□□□□ -1.58
USH2A-203ENST00000463147 FAM102AQ5T9C2 384 aaPredicted RBP5.2□□□□□ -1.58
USH2A-203ENST00000463147 ERAP2Q6P179 960 aa5.2□□□□□ -1.58
USH2A-203ENST00000463147 BTNL9Q6UXG8 535 aa5.2□□□□□ -1.58
USH2A-203ENST00000463147 LYSMD2Q8IV50 215 aa5.2□□□□□ -1.58
USH2A-203ENST00000463147 FAM43AQ8N2R8 423 aa5.2□□□□□ -1.58
USH2A-203ENST00000463147 ZBTB34Q8NCN2 500 aa5.2□□□□□ -1.58
USH2A-203ENST00000463147 DIS3LQ8TF46 1054 aaKnown RBP5.2□□□□□ -1.58
USH2A-203ENST00000463147 PAWRQ96IZ0 340 aaKnown RBP5.2□□□□□ -1.58
USH2A-203ENST00000463147 C1orf112Q9NSG2 853 aa5.2□□□□□ -1.58
USH2A-203ENST00000463147 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.2□□□□□ -1.58
USH2A-203ENST00000463147 LRIT1Q9P2V4 623 aa5.2□□□□□ -1.58
USH2A-203ENST00000463147 USP15Q9Y4E8 981 aaPredicted RBP5.2□□□□□ -1.58
USH2A-203ENST00000463147 NOX1Q9Y5S8 564 aa5.2□□□□□ -1.58
USH2A-203ENST00000463147 COL3A1P02461 1466 aaPredicted RBP5.2□□□□□ -1.58
USH2A-203ENST00000463147 A0A1W2PR48 441 aa5.19□□□□□ -1.58
USH2A-203ENST00000463147 TPP1O14773 563 aa5.19□□□□□ -1.58
USH2A-203ENST00000463147 NDUFS2O75306 463 aa5.19□□□□□ -1.58
USH2A-203ENST00000463147 OFD1O75665 1012 aa5.19□□□□□ -1.58
USH2A-203ENST00000463147 MATN4O95460 622 aa5.19□□□□□ -1.58
USH2A-203ENST00000463147 LPLP06858 475 aa5.19□□□□□ -1.58
USH2A-203ENST00000463147 MYL3P08590 195 aa5.19□□□□□ -1.58
USH2A-203ENST00000463147 LTA4HP09960 611 aaKnown RBP5.19□□□□□ -1.58
USH2A-203ENST00000463147 RHCEP18577 417 aa5.19□□□□□ -1.58
USH2A-203ENST00000463147 ADKP55263 362 aaKnown RBP5.19□□□□□ -1.58
USH2A-203ENST00000463147 SIM1P81133 766 aaPredicted RBP5.19□□□□□ -1.58
USH2A-203ENST00000463147 RHDQ02161 417 aa5.19□□□□□ -1.58
USH2A-203ENST00000463147 LONRF3Q496Y0 759 aa5.19□□□□□ -1.58
USH2A-203ENST00000463147 C19orf54Q5BKX5 351 aa5.19□□□□□ -1.58
USH2A-203ENST00000463147 Q6ZNX1 250 aa5.19□□□□□ -1.58
USH2A-203ENST00000463147 C1QL2Q7Z5L3 287 aa5.19□□□□□ -1.58
USH2A-203ENST00000463147 COL23A1Q86Y22 540 aaPredicted RBP5.19□□□□□ -1.58
USH2A-203ENST00000463147 C9orf106Q8NAJ2 232 aa5.19□□□□□ -1.58
USH2A-203ENST00000463147 FUBP1Q96AE4 644 aaKnown RBP5.19□□□□□ -1.58
USH2A-203ENST00000463147 ACAP3Q96P50 834 aa5.19□□□□□ -1.58
USH2A-203ENST00000463147 ELAC2Q9BQ52 826 aaKnown RBP5.19□□□□□ -1.58
USH2A-203ENST00000463147 HEPHQ9BQS7 1158 aa5.19□□□□□ -1.58
USH2A-203ENST00000463147 REXO4Q9GZR2 422 aaKnown RBP5.19□□□□□ -1.58
USH2A-203ENST00000463147 WNT8AQ9H1J5 351 aa5.19□□□□□ -1.58
USH2A-203ENST00000463147 USP18Q9UMW8 372 aa5.19□□□□□ -1.58
USH2A-203ENST00000463147 CCDC189A1A4V9 331 aa5.18□□□□□ -1.58
USH2A-203ENST00000463147 PFKMP08237 780 aa5.18□□□□□ -1.58
USH2A-203ENST00000463147 PDCP20941 246 aa5.18□□□□□ -1.58
USH2A-203ENST00000463147 EDNRBP24530 442 aa5.18□□□□□ -1.58
USH2A-203ENST00000463147 ALDH5A1P51649 535 aaPredicted RBP5.18□□□□□ -1.58
USH2A-203ENST00000463147 TRIM25Q14258 630 aaKnown RBP5.18□□□□□ -1.58
USH2A-203ENST00000463147 LCE1AQ5T7P2 110 aa5.18□□□□□ -1.58
USH2A-203ENST00000463147 TOGARAM2Q6ZUX3 1019 aa5.18□□□□□ -1.58
USH2A-203ENST00000463147 ARHGEF25Q86VW2 580 aa5.18□□□□□ -1.58
USH2A-203ENST00000463147 SLC41A1Q8IVJ1 513 aa5.18□□□□□ -1.58
USH2A-203ENST00000463147 PRR18Q8N4B5 295 aa5.18□□□□□ -1.58
USH2A-203ENST00000463147 MSL3Q8N5Y2 521 aaKnown RBP5.18□□□□□ -1.58
USH2A-203ENST00000463147 PPM1NQ8N819 430 aa5.18□□□□□ -1.58
USH2A-203ENST00000463147 FAM156AQ8NDB6 213 aa5.18□□□□□ -1.58
USH2A-203ENST00000463147 COA7Q96BR5 231 aa5.18□□□□□ -1.58
USH2A-203ENST00000463147 Q96MF0 132 aa5.18□□□□□ -1.58
USH2A-203ENST00000463147 BRIP1Q9BX63 1249 aa5.18□□□□□ -1.58
USH2A-203ENST00000463147 TEX101Q9BY14 249 aa5.18□□□□□ -1.58
USH2A-203ENST00000463147 PPCSQ9HAB8 311 aa5.18□□□□□ -1.58
USH2A-203ENST00000463147 TBCCD1Q9NVR7 557 aa5.18□□□□□ -1.58
USH2A-203ENST00000463147 PJA2O43164 708 aa5.17□□□□□ -1.58
USH2A-203ENST00000463147 TUSC2O75896 110 aa5.17□□□□□ -1.58
USH2A-203ENST00000463147 ZNF81P51508 661 aa5.17□□□□□ -1.58
USH2A-203ENST00000463147 MRPS35P82673 323 aaKnown RBP5.17□□□□□ -1.58
USH2A-203ENST00000463147 KIF23Q02241 960 aaPredicted RBP5.17□□□□□ -1.58
USH2A-203ENST00000463147 MGAT5Q09328 741 aa5.17□□□□□ -1.58
USH2A-203ENST00000463147 UGT8Q16880 541 aa5.17□□□□□ -1.58
USH2A-203ENST00000463147 INO80DQ53TQ3 878 aaPredicted RBP5.17□□□□□ -1.58
USH2A-203ENST00000463147 AGAP9Q5VTM2 703 aa5.17□□□□□ -1.58
USH2A-203ENST00000463147 XRRA1Q6P2D8 792 aa5.17□□□□□ -1.58
USH2A-203ENST00000463147 PTF1AQ7RTS3 328 aa5.17□□□□□ -1.58
USH2A-203ENST00000463147 RHOT2Q8IXI1 618 aa5.17□□□□□ -1.58
USH2A-203ENST00000463147 GRAMD1CQ8IYS0 662 aa5.17□□□□□ -1.58
USH2A-203ENST00000463147 Q8N9P0 234 aaPredicted RBP5.17□□□□□ -1.58
USH2A-203ENST00000463147 TSPEARQ8WU66 669 aa5.17□□□□□ -1.58
USH2A-203ENST00000463147 GJA10Q969M2 543 aa5.17□□□□□ -1.58
USH2A-203ENST00000463147 TTC17Q96AE7 1141 aa5.17□□□□□ -1.58
USH2A-203ENST00000463147 KRTAP1-5Q9BYS1 174 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms