RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 CHD6Q8TD26 2715 aa11.87□□□□□ -0.51
CBX3-205ENST00000462165 K7ESF4 209 aa11.87□□□□□ -0.51
CBX3-205ENST00000462165 CHADO15335 359 aa11.87□□□□□ -0.51
CBX3-205ENST00000462165 GDF9O60383 454 aa11.87□□□□□ -0.51
CBX3-205ENST00000462165 OR52Z1P0C646 297 aa11.87□□□□□ -0.51
CBX3-205ENST00000462165 MCF2P10911 925 aa11.87□□□□□ -0.51
CBX3-205ENST00000462165 PROZP22891 400 aa11.87□□□□□ -0.51
CBX3-205ENST00000462165 DMWDQ09019 674 aa11.87□□□□□ -0.51
CBX3-205ENST00000462165 FCHO2Q0JRZ9 810 aa11.87□□□□□ -0.51
CBX3-205ENST00000462165 SRSF5Q13243 272 aaKnown RBP11.87□□□□□ -0.51
CBX3-205ENST00000462165 TRIM29Q14134 588 aa11.87□□□□□ -0.51
CBX3-205ENST00000462165 TEAD2Q15562 447 aa11.87□□□□□ -0.51
CBX3-205ENST00000462165 ECM1Q16610 540 aa11.87□□□□□ -0.51
CBX3-205ENST00000462165 ME3Q16798 604 aa11.87□□□□□ -0.51
CBX3-205ENST00000462165 WDR44Q5JSH3 913 aa11.87□□□□□ -0.51
CBX3-205ENST00000462165 HAUS3Q68CZ6 603 aa11.87□□□□□ -0.51
CBX3-205ENST00000462165 RNF19BQ6ZMZ0 732 aa11.87□□□□□ -0.51
CBX3-205ENST00000462165 TAS1R3Q7RTX0 852 aa11.87□□□□□ -0.51
CBX3-205ENST00000462165 BEST2Q8NFU1 509 aa11.87□□□□□ -0.51
CBX3-205ENST00000462165 SHKBP1Q8TBC3 707 aa11.87□□□□□ -0.51
CBX3-205ENST00000462165 DDX12PQ92771 950 aa11.87□□□□□ -0.51
CBX3-205ENST00000462165 RSPRY1Q96DX4 576 aa11.87□□□□□ -0.51
CBX3-205ENST00000462165 CHAMP1Q96JM3 812 aa11.87□□□□□ -0.51
CBX3-205ENST00000462165 LRRC3Q9BY71 257 aa11.87□□□□□ -0.51
CBX3-205ENST00000462165 MRPL4Q9BYD3 311 aaKnown RBP11.87□□□□□ -0.51
CBX3-205ENST00000462165 BHMT2Q9H2M3 363 aa11.87□□□□□ -0.51
CBX3-205ENST00000462165 ARHGAP28Q9P2N2 729 aa11.87□□□□□ -0.51
CBX3-205ENST00000462165 MYBPHLA2RUH7 354 aa11.86□□□□□ -0.51
CBX3-205ENST00000462165 ABLIM1O14639 778 aa11.86□□□□□ -0.51
CBX3-205ENST00000462165 LARGE1O95461 756 aa11.86□□□□□ -0.51
CBX3-205ENST00000462165 CPB1P15086 417 aa11.86□□□□□ -0.51
CBX3-205ENST00000462165 MCM4P33991 863 aa11.86□□□□□ -0.51
CBX3-205ENST00000462165 NPTX2P47972 431 aa11.86□□□□□ -0.51
CBX3-205ENST00000462165 KPNA1P52294 538 aaPredicted RBP11.86□□□□□ -0.51
CBX3-205ENST00000462165 PEX3P56589 373 aa11.86□□□□□ -0.51
CBX3-205ENST00000462165 DGKKQ5KSL6 1271 aa11.86□□□□□ -0.51
CBX3-205ENST00000462165 TMC8Q8IU68 726 aa11.86□□□□□ -0.51
CBX3-205ENST00000462165 YAF2Q8IY57 180 aa11.86□□□□□ -0.51
CBX3-205ENST00000462165 C18orf25Q96B23 403 aaPredicted RBP11.86□□□□□ -0.51
CBX3-205ENST00000462165 TBC1D32Q96NH3 1257 aa11.86□□□□□ -0.51
CBX3-205ENST00000462165 TARS2Q9BW92 718 aaKnown RBP11.86□□□□□ -0.51
CBX3-205ENST00000462165 SLITRK6Q9H5Y7 841 aa11.86□□□□□ -0.51
CBX3-205ENST00000462165 RBM12Q9NTZ6 932 aaKnown RBP11.86□□□□□ -0.51
CBX3-205ENST00000462165 PCDHB8Q9UN66 801 aa11.86□□□□□ -0.51
CBX3-205ENST00000462165 YIPF1Q9Y548 306 aa11.86□□□□□ -0.51
CBX3-205ENST00000462165 EML5Q05BV3 1969 aa11.86□□□□□ -0.51
CBX3-205ENST00000462165 CNOT1A5YKK6 2376 aaKnown RBP11.85□□□□□ -0.51
CBX3-205ENST00000462165 A0A1W2PRU2 124 aa11.85□□□□□ -0.51
CBX3-205ENST00000462165 SLC38A8A6NNN8 435 aa11.85□□□□□ -0.51
CBX3-205ENST00000462165 CCDC169A6NNP5 214 aa11.85□□□□□ -0.51
CBX3-205ENST00000462165 SPECC1L-ADORA2AF8WAN1 911 aa11.85□□□□□ -0.51
CBX3-205ENST00000462165 M0QZQ0 153 aa11.85□□□□□ -0.51
CBX3-205ENST00000462165 MEFVO15553 781 aaPredicted RBP11.85□□□□□ -0.51
CBX3-205ENST00000462165 JAK2O60674 1132 aa11.85□□□□□ -0.51
CBX3-205ENST00000462165 MARCKSP29966 332 aaPredicted RBP11.85□□□□□ -0.51
CBX3-205ENST00000462165 HOXA6P31267 233 aa11.85□□□□□ -0.51
CBX3-205ENST00000462165 CTHP32929 405 aa11.85□□□□□ -0.51
CBX3-205ENST00000462165 CCT6AP40227 531 aaKnown RBP11.85□□□□□ -0.51
CBX3-205ENST00000462165 SOX9P48436 509 aa11.85□□□□□ -0.51
CBX3-205ENST00000462165 FOSBP53539 338 aa11.85□□□□□ -0.51
CBX3-205ENST00000462165 LIMK1P53667 647 aa11.85□□□□□ -0.51
CBX3-205ENST00000462165 ANAPC15P60006 121 aa11.85□□□□□ -0.51
CBX3-205ENST00000462165 PLD1Q13393 1074 aa11.85□□□□□ -0.51
CBX3-205ENST00000462165 TXNDC11Q6PKC3 985 aa11.85□□□□□ -0.51
CBX3-205ENST00000462165 MPZL3Q6UWV2 235 aa11.85□□□□□ -0.51
CBX3-205ENST00000462165 Q6ZS52 159 aa11.85□□□□□ -0.51
CBX3-205ENST00000462165 WDR5BQ86VZ2 330 aa11.85□□□□□ -0.51
CBX3-205ENST00000462165 RALGPS2Q86X27 583 aaPredicted RBP11.85□□□□□ -0.51
CBX3-205ENST00000462165 FAM160A2Q8N612 972 aaPredicted RBP11.85□□□□□ -0.51
CBX3-205ENST00000462165 TCHPQ9BT92 498 aa11.85□□□□□ -0.51
CBX3-205ENST00000462165 OXCT2Q9BYC2 517 aaPredicted RBP11.85□□□□□ -0.51
CBX3-205ENST00000462165 DNAJC25Q9H1X3 360 aa11.85□□□□□ -0.51
CBX3-205ENST00000462165 ANGPTL2Q9UKU9 493 aa11.85□□□□□ -0.51
CBX3-205ENST00000462165 RBM19Q9Y4C8 960 aaKnown RBP11.85□□□□□ -0.51
CBX3-205ENST00000462165 ANK1P16157 1881 aa11.85□□□□□ -0.51
CBX3-205ENST00000462165 DENND4CQ5VZ89 1909 aa11.84□□□□□ -0.51
CBX3-205ENST00000462165 TM4SF5O14894 197 aa11.84□□□□□ -0.51
CBX3-205ENST00000462165 OAZ2O95190 189 aa11.84□□□□□ -0.51
CBX3-205ENST00000462165 VNN2O95498 520 aa11.84□□□□□ -0.51
CBX3-205ENST00000462165 PMLP29590 882 aa11.84□□□□□ -0.51
CBX3-205ENST00000462165 YWHAHQ04917 246 aaPredicted RBP11.84□□□□□ -0.51
CBX3-205ENST00000462165 DMP1Q13316 513 aaPredicted RBP11.84□□□□□ -0.51
CBX3-205ENST00000462165 CCINQ13939 588 aa11.84□□□□□ -0.51
CBX3-205ENST00000462165 SAFBQ15424 915 aaKnown RBP eCLIP11.84□□□□□ -0.51
CBX3-205ENST00000462165 ZNF174Q15697 407 aa11.84□□□□□ -0.51
CBX3-205ENST00000462165 SLC10A6Q3KNW5 377 aa11.84□□□□□ -0.51
CBX3-205ENST00000462165 ARHGAP29Q52LW3 1261 aa11.84□□□□□ -0.51
CBX3-205ENST00000462165 HEATR6Q6AI08 1181 aaKnown RBP11.84□□□□□ -0.51
CBX3-205ENST00000462165 IL31Q6EBC2 164 aa11.84□□□□□ -0.51
CBX3-205ENST00000462165 CEP68Q76N32 757 aa11.84□□□□□ -0.51
CBX3-205ENST00000462165 ARID3BQ8IVW6 561 aaPredicted RBP11.84□□□□□ -0.51
CBX3-205ENST00000462165 DAW1Q8N136 415 aa11.84□□□□□ -0.51
CBX3-205ENST00000462165 SYNPOQ8N3V7 929 aa11.84□□□□□ -0.51
CBX3-205ENST00000462165 LOXL4Q96JB6 756 aa11.84□□□□□ -0.51
CBX3-205ENST00000462165 MKNK1Q9BUB5 465 aa11.84□□□□□ -0.51
CBX3-205ENST00000462165 CRISPLD1Q9H336 500 aa11.84□□□□□ -0.51
CBX3-205ENST00000462165 KMT5AQ9NQR1 393 aa11.84□□□□□ -0.51
CBX3-205ENST00000462165 DDX19AQ9NUU7 478 aaKnown RBP11.84□□□□□ -0.51
CBX3-205ENST00000462165 C2orf42Q9NWW7 574 aa11.84□□□□□ -0.51
CBX3-205ENST00000462165 OBP2AQ9NY56 170 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms