RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 ZNF662Q6ZS27 426 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 PHLDB2Q86SQ0 1253 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 NOP9Q86U38 636 aaKnown RBP4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 URGCPQ8TCY9 931 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 HELQQ8TDG4 1101 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 TSC1Q92574 1164 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 RABGGTAQ92696 567 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 KAT2BQ92831 832 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 PBKQ96KB5 322 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 NUP85Q9BW27 656 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 NT5C1AQ9BXI3 368 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 IFT122Q9HBG6 1241 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 ARFGAP3Q9NP61 516 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 UVRAGQ9P2Y5 699 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 GTF2IRD1Q9UHL9 959 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 STRIP2Q9ULQ0 834 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 SNX12Q9UMY4 172 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 MRFAP1Q9Y605 127 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 CAPN6Q9Y6Q1 641 aa4.39□□□□□ -1.71
ATP13A3-206ENST00000461660 MOXD2PA6NHM9 499 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 TTLL13PA6NNM8 815 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 PGRMC1O00264 195 aaKnown RBP4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 NCK2O43639 380 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 BRD2P25440 801 aaKnown RBP4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 SSTR3P32745 418 aaPredicted RBP4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 ACLYP53396 1101 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 TRIM32Q13049 653 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 HSP90B2PQ58FF3 399 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 ACAD10Q6JQN1 1059 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 MMS22LQ6ZRQ5 1243 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 SLC35G2Q8TBE7 412 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 TMEM174Q8WUU8 243 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 CPA5Q8WXQ8 436 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 TNIP3Q96KP6 325 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 OSBPL9Q96SU4 736 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 THAP2Q9H0W7 228 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 NXF3Q9H4D5 531 aaKnown RBP4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 L2HGDHQ9H9P8 463 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 AJAP1Q9UKB5 411 aaPredicted RBP4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 ST3GAL5Q9UNP4 418 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 LOC285556D6RIA3 1793 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 MYH9P35579 1960 aaKnown RBP4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 OTOFQ9HC10 1997 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 COL11A1P12107 1806 aaPredicted RBP4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 A0A0A6YYK5 440 aaPredicted RBP4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 A0A0U1RQJ8 604 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 MBLAC1A4D2B0 266 aaPredicted RBP4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 MYADML2A6NDP7 307 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 RCCD1A6NED2 376 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 RBAK-RBAKDNI3L0D1 243 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 KRIT1O00522 736 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 ZNF263O14978 683 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 SRGAP2O75044 1071 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 RNF8O76064 485 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 HTRA3P83110 453 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 PPP2R5EQ16537 467 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 LONRF2Q1L5Z9 754 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 SLC10A6Q3KNW5 377 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 FBXO47Q5MNV8 452 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 C1orf220Q5T0J3 134 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 OR6B2Q6IFH4 312 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 CRELD2Q6UXH1 353 aaPredicted RBP4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 KLHL7Q8IXQ5 586 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 EFCAB13Q8IY85 973 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 GPR161Q8N6U8 529 aaKnown RBP4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 APPL2Q8NEU8 664 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 CCDC26Q8TAB7 109 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 LNX1Q8TBB1 728 aaPredicted RBP4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 PXYLP1Q8TE99 480 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 ZNF296Q8WUU4 475 aaPredicted RBP4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 UBE2Q2Q8WVN8 375 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 ATRIPQ8WXE1 791 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 ZNF516Q92618 1163 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 RASAL2Q9UJF2 1139 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 KIAA1257Q9ULG3 409 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 POLIQ9UNA4 740 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 DERAQ9Y315 318 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 NOC2LQ9Y3T9 749 aaKnown RBP4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 DCDC2CA8MYV0 355 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 HAS3O00219 553 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 ADCY6O43306 1168 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 BUB1BO60566 1050 aaPredicted RBP4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 LCA5LO95447 670 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 LSM8O95777 96 aaKnown RBP4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 TFRCP02786 760 aaKnown RBP4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 THP07101 528 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 CD52P31358 61 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 RAP1GAPP47736 663 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 CDH8P55286 799 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 PSMC1P62191 440 aaKnown RBP4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 PTPN11Q06124 597 aaPredicted RBP4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 HADHQ16836 314 aaKnown RBP4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 CLEC16AQ2KHT3 1053 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 GDF6Q6KF10 455 aaPredicted RBP4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 C1orf127Q8N9H9 656 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 USP38Q8NB14 1042 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 TRPV1Q8NER1 839 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 TPCN2Q8NHX9 752 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 MAIP1Q8WWC4 291 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms