RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 PDZRN4Q6ZMN7 1036 aaPredicted RBP20■□□□□ 0.79
COL9A2-205ENST00000461118 GLYCTKQ8IVS8 523 aa20■□□□□ 0.79
COL9A2-205ENST00000461118 CD302Q8IX05 232 aa20■□□□□ 0.79
COL9A2-205ENST00000461118 MAML2Q8IZL2 1156 aaPredicted RBP20■□□□□ 0.79
COL9A2-205ENST00000461118 C3orf58Q8NDZ4 430 aa20■□□□□ 0.79
COL9A2-205ENST00000461118 LNX1Q8TBB1 728 aaPredicted RBP20■□□□□ 0.79
COL9A2-205ENST00000461118 C18orf25Q96B23 403 aaPredicted RBP20■□□□□ 0.79
COL9A2-205ENST00000461118 RPF1Q9H9Y2 349 aaKnown RBP20■□□□□ 0.79
COL9A2-205ENST00000461118 ARHGEF3Q9NR81 526 aa20■□□□□ 0.79
COL9A2-205ENST00000461118 TCHHQ07283 1943 aa20■□□□□ 0.79
COL9A2-205ENST00000461118 LACTBL1A8MY62 500 aa19.99■□□□□ 0.79
COL9A2-205ENST00000461118 PODXLO00592 558 aa19.99■□□□□ 0.79
COL9A2-205ENST00000461118 ZMYND10O75800 440 aa19.99■□□□□ 0.79
COL9A2-205ENST00000461118 GCNT3O95395 438 aa19.99■□□□□ 0.79
COL9A2-205ENST00000461118 SP9P0CG40 484 aa19.99■□□□□ 0.79
COL9A2-205ENST00000461118 CYP3A5P20815 502 aa19.99■□□□□ 0.79
COL9A2-205ENST00000461118 ADSSP30520 456 aa19.99■□□□□ 0.79
COL9A2-205ENST00000461118 CASP5P51878 434 aa19.99■□□□□ 0.79
COL9A2-205ENST00000461118 PPP2R3AQ06190 1150 aa19.99■□□□□ 0.79
COL9A2-205ENST00000461118 KCNA1Q09470 495 aa19.99■□□□□ 0.79
COL9A2-205ENST00000461118 ELMSAN1Q6PJG2 1045 aa19.99■□□□□ 0.79
COL9A2-205ENST00000461118 GET4Q7L5D6 327 aaPredicted RBP19.99■□□□□ 0.79
COL9A2-205ENST00000461118 FGF14Q92915 247 aa19.99■□□□□ 0.79
COL9A2-205ENST00000461118 SCAND2PQ9GZW5 306 aaPredicted RBP19.99■□□□□ 0.79
COL9A2-205ENST00000461118 PIDD1Q9HB75 910 aa19.99■□□□□ 0.79
COL9A2-205ENST00000461118 AGO2Q9UKV8 859 aaKnown RBP19.99■□□□□ 0.79
COL9A2-205ENST00000461118 SIT1Q9Y3P8 196 aa19.99■□□□□ 0.79
COL9A2-205ENST00000461118 TISP43B9A030 160 aa19.98■□□□□ 0.79
COL9A2-205ENST00000461118 LRRN2O75325 713 aa19.98■□□□□ 0.79
COL9A2-205ENST00000461118 LRPAP1P30533 357 aa19.98■□□□□ 0.79
COL9A2-205ENST00000461118 STARD6P59095 220 aa19.98■□□□□ 0.79
COL9A2-205ENST00000461118 PRSS55Q6UWB4 352 aaPredicted RBP19.98■□□□□ 0.79
COL9A2-205ENST00000461118 CEP57Q86XR8 500 aa19.98■□□□□ 0.79
COL9A2-205ENST00000461118 PJA1Q8NG27 643 aa19.98■□□□□ 0.79
COL9A2-205ENST00000461118 CHAMP1Q96JM3 812 aa19.98■□□□□ 0.79
COL9A2-205ENST00000461118 CLSTN3Q9BQT9 956 aa19.98■□□□□ 0.79
COL9A2-205ENST00000461118 FGFBP2Q9BYJ0 223 aa19.98■□□□□ 0.79
COL9A2-205ENST00000461118 FOXQ1Q9C009 403 aa19.98■□□□□ 0.79
COL9A2-205ENST00000461118 IKZF4Q9H2S9 585 aa19.98■□□□□ 0.79
COL9A2-205ENST00000461118 TMEM206Q9H813 350 aa19.98■□□□□ 0.79
COL9A2-205ENST00000461118 UBQLN1Q9UMX0 589 aaKnown RBP19.98■□□□□ 0.79
COL9A2-205ENST00000461118 MED19A0JLT2 244 aaPredicted RBP19.97■□□□□ 0.79
COL9A2-205ENST00000461118 SLFN14P0C7P3 912 aa19.97■□□□□ 0.79
COL9A2-205ENST00000461118 ASIC1P78348 528 aa19.97■□□□□ 0.79
COL9A2-205ENST00000461118 NTHL1P78549 312 aa19.97■□□□□ 0.79
COL9A2-205ENST00000461118 EHHADHQ08426 723 aa19.97■□□□□ 0.79
COL9A2-205ENST00000461118 PARM1Q6UWI2 310 aa19.97■□□□□ 0.79
COL9A2-205ENST00000461118 STXBP4Q6ZWJ1 553 aa19.97■□□□□ 0.79
COL9A2-205ENST00000461118 C1orf210Q8IVY1 113 aa19.97■□□□□ 0.79
COL9A2-205ENST00000461118 KIAA2013Q8IYS2 634 aa19.97■□□□□ 0.79
COL9A2-205ENST00000461118 POMGNT1Q8WZA1 660 aa19.97■□□□□ 0.79
COL9A2-205ENST00000461118 KIF12Q96FN5 646 aa19.97■□□□□ 0.79
COL9A2-205ENST00000461118 ASB7Q9H672 318 aa19.97■□□□□ 0.79
COL9A2-205ENST00000461118 FBXW11Q9UKB1 542 aa19.97■□□□□ 0.79
COL9A2-205ENST00000461118 HPSEQ9Y251 543 aa19.97■□□□□ 0.79
COL9A2-205ENST00000461118 DERAQ9Y315 318 aa19.97■□□□□ 0.79
COL9A2-205ENST00000461118 GPR179Q6PRD1 2367 aa19.97■□□□□ 0.79
COL9A2-205ENST00000461118 FAM237AA0A1B0GTK4 181 aa19.96■□□□□ 0.79
COL9A2-205ENST00000461118 PVALEFA0A1B0GWK0 134 aa19.96■□□□□ 0.79
COL9A2-205ENST00000461118 XPOTO43592 962 aaKnown RBP19.96■□□□□ 0.79
COL9A2-205ENST00000461118 GARTP22102 1010 aa19.96■□□□□ 0.79
COL9A2-205ENST00000461118 BRCC3P46736 316 aa19.96■□□□□ 0.79
COL9A2-205ENST00000461118 ACOT2P49753 483 aa19.96■□□□□ 0.79
COL9A2-205ENST00000461118 GPC5P78333 572 aa19.96■□□□□ 0.79
COL9A2-205ENST00000461118 NUCB2P80303 420 aa19.96■□□□□ 0.79
COL9A2-205ENST00000461118 SPAG1Q07617 926 aa19.96■□□□□ 0.79
COL9A2-205ENST00000461118 PSMD5Q16401 504 aa19.96■□□□□ 0.79
COL9A2-205ENST00000461118 CRELD2Q6UXH1 353 aaPredicted RBP19.96■□□□□ 0.79
COL9A2-205ENST00000461118 UNC13DQ70J99 1090 aa19.96■□□□□ 0.79
COL9A2-205ENST00000461118 SUMF1Q8NBK3 374 aa19.96■□□□□ 0.79
COL9A2-205ENST00000461118 DDX23Q9BUQ8 820 aaKnown RBP19.96■□□□□ 0.79
COL9A2-205ENST00000461118 TUBGCP4Q9UGJ1 667 aa19.96■□□□□ 0.79
COL9A2-205ENST00000461118 USP25Q9UHP3 1055 aa19.96■□□□□ 0.79
COL9A2-205ENST00000461118 SYN3O14994 580 aa19.95■□□□□ 0.78
COL9A2-205ENST00000461118 PRPF6O94906 941 aaKnown RBP19.95■□□□□ 0.78
COL9A2-205ENST00000461118 PFKFB1P16118 471 aa19.95■□□□□ 0.78
COL9A2-205ENST00000461118 FSHRP23945 695 aa19.95■□□□□ 0.78
COL9A2-205ENST00000461118 SPATA1Q5VX52 437 aa19.95■□□□□ 0.78
COL9A2-205ENST00000461118 ANKS3Q6ZW76 656 aa19.95■□□□□ 0.78
COL9A2-205ENST00000461118 EPM2AIP1Q7L775 607 aaPredicted RBP19.95■□□□□ 0.78
COL9A2-205ENST00000461118 GRASPQ7Z6J2 395 aaPredicted RBP19.95■□□□□ 0.78
COL9A2-205ENST00000461118 CEP57L1Q8IYX8 460 aa19.95■□□□□ 0.78
COL9A2-205ENST00000461118 SYCP3Q8IZU3 236 aa19.95■□□□□ 0.78
COL9A2-205ENST00000461118 DCLK2Q8N568 766 aa19.95■□□□□ 0.78
COL9A2-205ENST00000461118 ZNF507Q8TCN5 953 aa19.95■□□□□ 0.78
COL9A2-205ENST00000461118 SUSD3Q96L08 255 aa19.95■□□□□ 0.78
COL9A2-205ENST00000461118 MTRRQ9UBK8 725 aa19.95■□□□□ 0.78
COL9A2-205ENST00000461118 SERTAD1Q9UHV2 236 aa19.95■□□□□ 0.78
COL9A2-205ENST00000461118 NUB1Q9Y5A7 615 aa19.95■□□□□ 0.78
COL9A2-205ENST00000461118 BACE2Q9Y5Z0 518 aa19.95■□□□□ 0.78
COL9A2-205ENST00000461118 ZFP37Q9Y6Q3 630 aaPredicted RBP19.95■□□□□ 0.78
COL9A2-205ENST00000461118 A0A1B0GVL5 298 aa19.94■□□□□ 0.78
COL9A2-205ENST00000461118 A0A1W2PQ27 194 aa19.94■□□□□ 0.78
COL9A2-205ENST00000461118 A0A1W2PQ64 194 aa19.94■□□□□ 0.78
COL9A2-205ENST00000461118 A0A1W2PQD8 194 aa19.94■□□□□ 0.78
COL9A2-205ENST00000461118 I3L4J1 428 aa19.94■□□□□ 0.78
COL9A2-205ENST00000461118 EIF3DO15371 548 aaKnown RBP eCLIP19.94■□□□□ 0.78
COL9A2-205ENST00000461118 ADAM12O43184 909 aa19.94■□□□□ 0.78
COL9A2-205ENST00000461118 ACTN4O43707 911 aaKnown RBP19.94■□□□□ 0.78
COL9A2-205ENST00000461118 LDHAP00338 332 aaKnown RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms